| Year |
Citation |
Score |
| 2024 |
Adameyko I, Bakken T, Bhaduri A, Chhatbar C, Filbin MG, Gate D, Hochgerner H, Kim CN, Krull J, La Manno G, Li Q, Linnarsson S, Ma Q, Mayer C, Menon V, et al. Applying single-cell and single-nucleus genomics to studies of cellular heterogeneity and cell fate transitions in the nervous system. Nature Neuroscience. 27: 2278-2291. PMID 39627588 DOI: 10.1038/s41593-024-01827-9 |
0.801 |
|
| 2024 |
Mannens CCA, Hu L, Lönnerberg P, Schipper M, Reagor CC, Li X, He X, Barker RA, Sundström E, Posthuma D, Linnarsson S. Chromatin accessibility during human first-trimester neurodevelopment. Nature. PMID 38693260 DOI: 10.1038/s41586-024-07234-1 |
0.326 |
|
| 2023 |
Tian W, Zhou J, Bartlett A, Zeng Q, Liu H, Castanon RG, Kenworthy M, Altshul J, Valadon C, Aldridge A, Nery JR, Chen H, Xu J, Johnson ND, Lucero J, ... ... Linnarsson S, et al. Single-cell DNA methylation and 3D genome architecture in the human brain. Science (New York, N.Y.). 382: eadf5357. PMID 37824674 DOI: 10.1126/science.adf5357 |
0.356 |
|
| 2023 |
Siletti K, Hodge R, Mossi Albiach A, Lee KW, Ding SL, Hu L, Lönnerberg P, Bakken T, Casper T, Clark M, Dee N, Gloe J, Hirschstein D, Shapovalova NV, Keene CD, ... ... Linnarsson S, et al. Transcriptomic diversity of cell types across the adult human brain. Science (New York, N.Y.). 382: eadd7046. PMID 37824663 DOI: 10.1126/science.add7046 |
0.594 |
|
| 2023 |
Jorstad NL, Close J, Johansen N, Yanny AM, Barkan ER, Travaglini KJ, Bertagnolli D, Campos J, Casper T, Crichton K, Dee N, Ding SL, Gelfand E, Goldy J, Hirschstein D, ... ... Linnarsson S, et al. Transcriptomic cytoarchitecture reveals principles of human neocortex organization. Science (New York, N.Y.). 382: eadf6812. PMID 37824655 DOI: 10.1126/science.adf6812 |
0.3 |
|
| 2023 |
Braun E, Danan-Gotthold M, Borm LE, Lee KW, Vinsland E, Lönnerberg P, Hu L, Li X, He X, Andrusivová Ž, Lundeberg J, Barker RA, Arenas E, Sundström E, Linnarsson S. Comprehensive cell atlas of the first-trimester developing human brain. Science (New York, N.Y.). 382: eadf1226. PMID 37824650 DOI: 10.1126/science.adf1226 |
0.612 |
|
| 2023 |
Li YE, Preissl S, Miller M, Johnson ND, Wang Z, Jiao H, Zhu C, Wang Z, Xie Y, Poirion O, Kern C, Pinto-Duarte A, Tian W, Siletti K, Emerson N, ... ... Linnarsson S, et al. A comparative atlas of single-cell chromatin accessibility in the human brain. Science (New York, N.Y.). 382: eadf7044. PMID 37824643 DOI: 10.1126/science.adf7044 |
0.348 |
|
| 2023 |
Jorstad NL, Song JHT, Exposito-Alonso D, Suresh H, Castro-Pacheco N, Krienen FM, Yanny AM, Close J, Gelfand E, Long B, Seeman SC, Travaglini KJ, Basu S, Beaudin M, Bertagnolli D, ... ... Linnarsson S, et al. Comparative transcriptomics reveals human-specific cortical features. Science (New York, N.Y.). 382: eade9516. PMID 37824638 DOI: 10.1126/science.ade9516 |
0.306 |
|
| 2023 |
Munguba H, Nikouei K, Hochgerner H, Oberst P, Kouznetsova A, Ryge J, Muñoz-Manchado AB, Close J, Batista-Brito R, Linnarsson S, Hjerling-Leffler J. Transcriptional maintenance of cortical somatostatin interneuron subtype identity during migration. Neuron. PMID 37625400 DOI: 10.1016/j.neuron.2023.07.018 |
0.66 |
|
| 2023 |
Li X, Andrusivova Z, Czarnewski P, Langseth CM, Andersson A, Liu Y, Gyllborg D, Braun E, Larsson L, Hu L, Alekseenko Z, Lee H, Avenel C, Kallner HK, Åkesson E, ... ... Linnarsson S, et al. Profiling spatiotemporal gene expression of the developing human spinal cord and implications for ependymoma origin. Nature Neuroscience. PMID 37095395 DOI: 10.1038/s41593-023-01312-9 |
0.614 |
|
| 2023 |
Sountoulidis A, Marco Salas S, Braun E, Avenel C, Bergenstråhle J, Theelke J, Vicari M, Czarnewski P, Liontos A, Abalo X, Andrusivová Ž, Mirzazadeh R, Asp M, Li X, Hu L, ... ... Linnarsson S, et al. A topographic atlas defines developmental origins of cell heterogeneity in the human embryonic lung. Nature Cell Biology. PMID 36646791 DOI: 10.1038/s41556-022-01064-x |
0.376 |
|
| 2022 |
Nishimura K, Yang S, Lee KW, Ásgrímsdóttir ES, Nikouei K, Paslawski W, Gnodde S, Lyu G, Hu L, Saltó C, Svenningsson P, Hjerling-Leffler J, Linnarsson S, Arenas E. Single-cell transcriptomics reveals correct developmental dynamics and high-quality midbrain cell types by improved hESC differentiation. Stem Cell Reports. PMID 36400027 DOI: 10.1016/j.stemcr.2022.10.016 |
0.778 |
|
| 2022 |
van Bruggen D, Pohl F, Langseth CM, Kukanja P, Lee H, Albiach AM, Kabbe M, Meijer M, Linnarsson S, Hilscher MM, Nilsson M, Sundström E, Castelo-Branco G. Developmental landscape of human forebrain at a single-cell level identifies early waves of oligodendrogenesis. Developmental Cell. PMID 35523173 DOI: 10.1016/j.devcel.2022.04.016 |
0.322 |
|
| 2022 |
Liu R, Pisco AO, Braun E, Linnarsson S, Zou J. Dynamical Systems Model of RNA Velocity Improves Inference of Single-cell Trajectory, Pseudo-time and Gene Regulation. Journal of Molecular Biology. 167606. PMID 35489382 DOI: 10.1016/j.jmb.2022.167606 |
0.324 |
|
| 2022 |
Luo C, Liu H, Xie F, Armand EJ, Siletti K, Bakken TE, Fang R, Doyle WI, Stuart T, Hodge RD, Hu L, Wang BA, Zhang Z, Preissl S, Lee DS, ... ... Linnarsson S, et al. Single nucleus multi-omics identifies human cortical cell regulatory genome diversity. Cell Genomics. 2. PMID 35419551 DOI: 10.1016/j.xgen.2022.100107 |
0.372 |
|
| 2021 |
Bakken TE, Jorstad NL, Hu Q, Lake BB, Tian W, Kalmbach BE, Crow M, Hodge RD, Krienen FM, Sorensen SA, Eggermont J, Yao Z, Aevermann BD, Aldridge AI, Bartlett A, ... ... Linnarsson S, et al. Comparative cellular analysis of motor cortex in human, marmoset and mouse. Nature. 598: 111-119. PMID 34616062 DOI: 10.1038/s41586-021-03465-8 |
0.391 |
|
| 2021 |
La Manno G, Siletti K, Furlan A, Gyllborg D, Vinsland E, Mossi Albiach A, Mattsson Langseth C, Khven I, Lederer AR, Dratva LM, Johnsson A, Nilsson M, Lönnerberg P, Linnarsson S. Molecular architecture of the developing mouse brain. Nature. 596: 92-96. PMID 34321664 DOI: 10.1038/s41586-021-03775-x |
0.797 |
|
| 2020 |
Rajewsky N, Almouzni G, Gorski SA, Aerts S, Amit I, Bertero MG, Bock C, Bredenoord AL, Cavalli G, Chiocca S, Clevers H, De Strooper B, Eggert A, Ellenberg J, Fernández XM, ... ... Linnarsson S, et al. LifeTime and improving European healthcare through cell-based interceptive medicine. Nature. PMID 32894860 DOI: 10.1038/S41586-020-2715-9 |
0.351 |
|
| 2020 |
Toledo EM, Yang S, Gyllborg D, van Wijk KE, Sinha I, Varas-Godoy M, Grigsby CL, Lönnerberg P, Islam S, Steffensen KR, Linnarsson S, Arenas E. Srebf1 Controls Midbrain Dopaminergic Neurogenesis. Cell Reports. 31: 107601. PMID 32375051 DOI: 10.1016/J.Celrep.2020.107601 |
0.66 |
|
| 2019 |
Wang Y, Wu H, Fontanet P, Codeluppi S, Akkuratova N, Petitpré C, Xue-Franzén Y, Niederreither K, Sharma A, Da Silva F, Comai G, Agirman G, Palumberi D, Linnarsson S, Adameyko I, et al. A cell fitness selection model for neuronal survival during development. Nature Communications. 10: 4137. PMID 31515492 DOI: 10.1038/S41467-019-12119-3 |
0.804 |
|
| 2019 |
Goodridge JP, Jacobs B, Saetersmoen ML, Clement D, Hammer Q, Clancy T, Skarpen E, Brech A, Landskron J, Grimm C, Pfefferle A, Meza-Zepeda L, Lorenz S, Wiiger MT, Louch WE, ... ... Linnarsson S, et al. Remodeling of secretory lysosomes during education tunes functional potential in NK cells. Nature Communications. 10: 514. PMID 30705279 DOI: 10.1038/S41467-019-08384-X |
0.344 |
|
| 2018 |
Codeluppi S, Borm LE, Zeisel A, La Manno G, van Lunteren JA, Svensson CI, Linnarsson S. Spatial organization of the somatosensory cortex revealed by osmFISH. Nature Methods. 15: 932-935. PMID 30377364 DOI: 10.1038/S41592-018-0175-Z |
0.802 |
|
| 2018 |
Mezger A, Klemm S, Mann I, Brower K, Mir A, Bostick M, Farmer A, Fordyce P, Linnarsson S, Greenleaf W. High-throughput chromatin accessibility profiling at single-cell resolution. Nature Communications. 9: 3647. PMID 30194434 DOI: 10.1038/S41467-018-05887-X |
0.423 |
|
| 2018 |
Muñoz-Manchado AB, Bengtsson Gonzales C, Zeisel A, Munguba H, Bekkouche B, Skene NG, Lönnerberg P, Ryge J, Harris KD, Linnarsson S, Hjerling-Leffler J. Diversity of Interneurons in the Dorsal Striatum Revealed by Single-Cell RNA Sequencing and PatchSeq. Cell Reports. 24: 2179-2190.e7. PMID 30134177 DOI: 10.1016/J.Celrep.2018.07.053 |
0.823 |
|
| 2018 |
Zeisel A, Hochgerner H, Lönnerberg P, Johnsson A, Memic F, van der Zwan J, Häring M, Braun E, Borm LE, La Manno G, Codeluppi S, Furlan A, Lee K, Skene N, Harris KD, ... ... Linnarsson S, et al. Molecular Architecture of the Mouse Nervous System. Cell. 174: 999-1014.e22. PMID 30096314 DOI: 10.1016/J.Cell.2018.06.021 |
0.81 |
|
| 2018 |
La Manno G, Soldatov R, Zeisel A, Braun E, Hochgerner H, Petukhov V, Lidschreiber K, Kastriti ME, Lönnerberg P, Furlan A, Fan J, Borm LE, Liu Z, van Bruggen D, Guo J, ... ... Linnarsson S, et al. RNA velocity of single cells. Nature. PMID 30089906 DOI: 10.1038/S41586-018-0414-6 |
0.793 |
|
| 2018 |
Savage JE, Jansen PR, Stringer S, Watanabe K, Bryois J, de Leeuw CA, Nagel M, Awasthi S, Barr PB, Coleman JRI, Grasby KL, Hammerschlag AR, Kaminski JA, Karlsson R, Krapohl E, ... ... Linnarsson S, et al. Genome-wide association meta-analysis in 269,867 individuals identifies new genetic and functional links to intelligence. Nature Genetics. PMID 29942086 DOI: 10.1038/S41588-018-0152-6 |
0.657 |
|
| 2018 |
Nagel M, Jansen PR, Stringer S, Watanabe K, de Leeuw CA, Bryois J, Savage JE, Hammerschlag AR, Skene NG, Muñoz-Manchado AB, White T, Tiemeier H, Linnarsson S, Hjerling-Leffler J, et al. Meta-analysis of genome-wide association studies for neuroticism in 449,484 individuals identifies novel genetic loci and pathways. Nature Genetics. PMID 29942085 DOI: 10.1038/S41588-018-0151-7 |
0.656 |
|
| 2018 |
Harris KD, Hochgerner H, Skene NG, Magno L, Katona L, Bengtsson Gonzales C, Somogyi P, Kessaris N, Linnarsson S, Hjerling-Leffler J. Classes and continua of hippocampal CA1 inhibitory neurons revealed by single-cell transcriptomics. Plos Biology. 16: e2006387. PMID 29912866 DOI: 10.1371/Journal.Pbio.2006387 |
0.72 |
|
| 2018 |
Skene NG, Bryois J, Bakken TE, Breen G, Crowley JJ, Gaspar HA, Giusti-Rodriguez P, Hodge RD, Miller JA, Muñoz-Manchado AB, O'Donovan MC, Owen MJ, Pardiñas AF, Ryge J, Walters JTR, ... Linnarsson S, et al. Genetic identification of brain cell types underlying schizophrenia. Nature Genetics. PMID 29785013 DOI: 10.1038/s41588-018-0129-5 |
0.707 |
|
| 2018 |
Häring M, Zeisel A, Hochgerner H, Rinwa P, Jakobsson JET, Lönnerberg P, La Manno G, Sharma N, Borgius L, Kiehn O, Lagerström MC, Linnarsson S, Ernfors P. Neuronal atlas of the dorsal horn defines its architecture and links sensory input to transcriptional cell types. Nature Neuroscience. PMID 29686262 DOI: 10.1038/S41593-018-0141-1 |
0.808 |
|
| 2018 |
Coleman JRI, Bryois J, Gaspar HA, Jansen PR, Savage JE, Skene N, Plomin R, Muñoz-Manchado AB, Linnarsson S, Crawford G, Hjerling-Leffler J, Sullivan PF, Posthuma D, Breen G. Biological annotation of genetic loci associated with intelligence in a meta-analysis of 87,740 individuals. Molecular Psychiatry. PMID 29520040 DOI: 10.1038/S41380-018-0040-6 |
0.712 |
|
| 2018 |
Hochgerner H, Zeisel A, Lönnerberg P, Linnarsson S. Conserved properties of dentate gyrus neurogenesis across postnatal development revealed by single-cell RNA sequencing. Nature Neuroscience. PMID 29335606 DOI: 10.1038/S41593-017-0056-2 |
0.748 |
|
| 2018 |
Savage JE, Jansen PR, Stringer S, Watanabe K, Bryois J, Leeuw CAd, Nagel M, Awasthi S, Barr PB, Coleman JRI, Grasby KL, Hammerschlag AR, Kaminski J, Karlsson R, Krapohl E, ... ... Linnarsson S, et al. GWAS meta-analysis (N=279,930) identifies new genes and functional links to general cognitive ability Human Genomics. 12. DOI: 10.1186/S40246-018-0138-6 |
0.608 |
|
| 2017 |
Nguyen HT, Bryois J, Kim A, Dobbyn A, Huckins LM, Munoz-Manchado AB, Ruderfer DM, Genovese G, Fromer M, Xu X, Pinto D, Linnarsson S, Verhage M, Smit AB, Hjerling-Leffler J, et al. Integrated Bayesian analysis of rare exonic variants to identify risk genes for schizophrenia and neurodevelopmental disorders. Genome Medicine. 9: 114. PMID 29262854 DOI: 10.1186/S13073-017-0497-Y |
0.603 |
|
| 2017 |
Boström J, Sramkova Z, Salašová A, Johard H, Mahdessian D, Fedr R, Marks C, Medalová J, Souček K, Lundberg E, Linnarsson S, Bryja V, Sekyrova P, Altun M, Andäng M. Comparative cell cycle transcriptomics reveals synchronization of developmental transcription factor networks in cancer cells. Plos One. 12: e0188772. PMID 29228002 DOI: 10.1371/Journal.Pone.0188772 |
0.44 |
|
| 2017 |
Regev A, Teichmann SA, Lander ES, Amit I, Benoist C, Birney E, Bodenmiller B, Campbell PJ, Carninci P, Clatworthy M, Clevers H, Deplancke B, Dunham I, Eberwine J, Eils R, ... ... Linnarsson S, et al. Science Forum: The Human Cell Atlas. Elife. 6. PMID 29206104 DOI: 10.7554/Elife.27041 |
0.433 |
|
| 2017 |
Hochgerner H, Lönnerberg P, Hodge R, Mikes J, Heskol A, Hubschle H, Lin P, Picelli S, La Manno G, Ratz M, Dunne J, Husain S, Lein E, Srinivasan M, Zeisel A, ... Linnarsson S, et al. STRT-seq-2i: dual-index 5' single cell and nucleus RNA-seq on an addressable microwell array. Scientific Reports. 7: 16327. PMID 29180631 DOI: 10.1038/S41598-017-16546-4 |
0.809 |
|
| 2017 |
Ruetz T, Pfisterer U, Di Stefano B, Ashmore J, Beniazza M, Tian TV, Kaemena DF, Tosti L, Tan W, Manning JR, Chantzoura E, Ottosson DR, Collombet S, Johnsson A, Cohen E, ... ... Linnarsson S, et al. Constitutively Active SMAD2/3 Are Broad-Scope Potentiators of Transcription-Factor-Mediated Cellular Reprogramming. Cell Stem Cell. 21: 791-805.e9. PMID 29174331 DOI: 10.1016/J.Stem.2017.10.013 |
0.427 |
|
| 2017 |
Lein E, Borm LE, Linnarsson S. The promise of spatial transcriptomics for neuroscience in the era of molecular cell typing. Science (New York, N.Y.). 358: 64-69. PMID 28983044 DOI: 10.1126/Science.Aan6827 |
0.463 |
|
| 2017 |
Lake BB, Codeluppi S, Yung YC, Gao D, Chun J, Kharchenko PV, Linnarsson S, Zhang K. A comparative strategy for single-nucleus and single-cell transcriptomes confirms accuracy in predicted cell-type expression from nuclear RNA. Scientific Reports. 7: 6031. PMID 28729663 DOI: 10.1038/S41598-017-04426-W |
0.535 |
|
| 2017 |
Karlsson K, Lönnerberg P, Linnarsson S. Alternative TSSs are co-regulated in single cells in the mouse brain. Molecular Systems Biology. 13: 930. PMID 28495919 DOI: 10.15252/Msb.20167374 |
0.826 |
|
| 2017 |
di Val Cervo PR, Romanov RA, Spigolon G, Masini D, Martín-Montañez E, Toledo EM, La Manno G, Feyder M, Pifl C, Ng YH, Sánchez SP, Linnarsson S, Wernig M, Harkany T, Fisone G, et al. Induction of functional dopamine neurons from human astrocytes in vitro and mouse astrocytes in a Parkinson's disease model. Nature Biotechnology. PMID 28398344 DOI: 10.1038/Nbt.3835 |
0.776 |
|
| 2017 |
Karlsson K, Linnarsson S. Single-cell mRNA isoform diversity in the mouse brain. Bmc Genomics. 18: 126. PMID 28158971 DOI: 10.1186/S12864-017-3528-6 |
0.801 |
|
| 2017 |
Niklasson M, Maddalo G, Sramkova Z, Mutlu E, Wee S, Sekyrova P, Schmidt L, Fritz N, Dehnisch I, Kyriatzis G, Krafcikova M, Carson BB, Feenstra J, Marinescu VD, Segerman A, ... ... Linnarsson S, et al. Membrane-depolarizing channel blockers induce selective glioma cell death by impairing nutrient transport and unfolded protein/amino acid responses. Cancer Research. PMID 28087597 DOI: 10.1158/0008-5472.Can-16-2274 |
0.327 |
|
| 2017 |
Regev A, Teichmann SA, Lander ES, Amit I, Benoist C, Birney E, Bodenmiller B, Campbell P, Carninci P, Clatworthy M, Clevers H, Deplancke B, Dunham I, Eberwine J, Eils R, ... ... Linnarsson S, et al. Author response: The Human Cell Atlas Elife. DOI: 10.7554/Elife.27041.011 |
0.322 |
|
| 2017 |
Morarach K, Memic F, Zeisel A, Hochgerner H, Marklund U, Linnarsson S. Single-cell molecular interrogation of enteric nervous system development Mechanisms of Development. 145: S67. DOI: 10.1016/J.Mod.2017.04.151 |
0.731 |
|
| 2016 |
Romanov RA, Zeisel A, Bakker J, Girach F, Hellysaz A, Tomer R, Alpár A, Mulder J, Clotman F, Keimpema E, Hsueh B, Crow AK, Martens H, Schwindling C, Calvigioni D, ... ... Linnarsson S, et al. Molecular interrogation of hypothalamic organization reveals distinct dopamine neuronal subtypes. Nature Neuroscience. PMID 27991900 DOI: 10.1038/Nn.4462 |
0.725 |
|
| 2016 |
La Manno G, Gyllborg D, Codeluppi S, Nishimura K, Salto C, Zeisel A, Borm LE, Stott SR, Toledo EM, Villaescusa JC, Lönnerberg P, Ryge J, Barker RA, Arenas E, Linnarsson S. Molecular Diversity of Midbrain Development in Mouse, Human, and Stem Cells. Cell. 167: 566-580.e19. PMID 27716510 DOI: 10.1016/J.Cell.2016.09.027 |
0.83 |
|
| 2016 |
Joost S, Zeisel A, Jacob T, Sun X, La Manno G, Lönnerberg P, Linnarsson S, Kasper M. Single-Cell Transcriptomics Reveals that Differentiation and Spatial Signatures Shape Epidermal and Hair Follicle Heterogeneity. Cell Systems. PMID 27641957 DOI: 10.1016/J.Cels.2016.08.010 |
0.818 |
|
| 2016 |
Jouhilahti EM, Madissoon E, Vesterlund L, Töhönen V, Krjutŝkov K, Reyes AP, Petropoulos S, Månsson R, Linnarsson S, Bürglin T, Lanner F, Hovatta O, Katayama S, Kere J. The human PRD-like homeobox gene LEUTX has a central role in embryo genome activation. Development (Cambridge, England). PMID 27578796 DOI: 10.1242/Dev.134510 |
0.365 |
|
| 2016 |
Furlan A, La Manno G, Lübke M, Häring M, Abdo H, Hochgerner H, Kupari J, Usoskin D, Airaksinen MS, Oliver G, Linnarsson S, Ernfors P. Visceral motor neuron diversity delineates a cellular basis for nipple- and pilo-erection muscle control. Nature Neuroscience. PMID 27571008 DOI: 10.1038/Nn.4376 |
0.8 |
|
| 2016 |
Madissoon E, Jouhilahti EM, Vesterlund L, Töhönen V, Krjutškov K, Petropoulous S, Einarsdottir E, Linnarsson S, Lanner F, Månsson R, Hovatta O, Bürglin TR, Katayama S, Kere J. Characterization and target genes of nine human PRD-like homeobox domain genes expressed exclusively in early embryos. Scientific Reports. 6: 28995. PMID 27412763 DOI: 10.1038/Srep28995 |
0.362 |
|
| 2016 |
Ståhl PL, Salmén F, Vickovic S, Lundmark A, Navarro JF, Magnusson J, Giacomello S, Asp M, Westholm JO, Huss M, Mollbrink A, Linnarsson S, Codeluppi S, Borg Å, Pontén F, et al. Visualization and analysis of gene expression in tissue sections by spatial transcriptomics. Science (New York, N.Y.). 353: 78-82. PMID 27365449 DOI: 10.1126/Science.Aaf2403 |
0.314 |
|
| 2016 |
Villaescusa JC, Li B, Toledo EM, Rivetti di Val Cervo P, Yang S, Stott SR, Kaiser K, Islam S, Gyllborg D, Laguna-Goya R, Landreh M, Lönnerberg P, Falk A, Bergman T, Barker RA, ... Linnarsson S, et al. A PBX1 transcriptional network controls dopaminergic neuron development and is impaired in Parkinson's disease. The Embo Journal. PMID 27354364 DOI: 10.15252/Embj.201593725 |
0.682 |
|
| 2016 |
Marques S, Zeisel A, Codeluppi S, van Bruggen D, Mendanha Falcão A, Xiao L, Li H, Häring M, Hochgerner H, Romanov RA, Gyllborg D, Muñoz-Manchado AB, La Manno G, Lönnerberg P, Floriddia EM, ... ... Linnarsson S, et al. Oligodendrocyte heterogeneity in the mouse juvenile and adult central nervous system. Science (New York, N.Y.). 352: 1326-9. PMID 27284195 DOI: 10.1126/Science.Aaf6463 |
0.779 |
|
| 2016 |
Linnarsson S, Teichmann SA. Single-cell genomics: coming of age. Genome Biology. 17: 97. PMID 27160975 DOI: 10.1186/S13059-016-0960-X |
0.48 |
|
| 2016 |
Petropoulos S, Edsgärd D, Reinius B, Deng Q, Panula SP, Codeluppi S, Plaza Reyes A, Linnarsson S, Sandberg R, Lanner F. Single-Cell RNA-Seq Reveals Lineage and X Chromosome Dynamics in Human Preimplantation Embryos. Cell. PMID 27062923 DOI: 10.1016/J.Cell.2016.03.023 |
0.43 |
|
| 2016 |
Tervaniemi MH, Katayama S, Skoog T, Siitonen HA, Vuola J, Nuutila K, Sormunen R, Johnsson A, Linnarsson S, Suomela S, Kankuri E, Kere J, Elomaa O. NOD-like receptor signaling and inflammasome-related pathways are highlighted in psoriatic epidermis. Scientific Reports. 6: 22745. PMID 26976200 DOI: 10.1038/Srep22745 |
0.303 |
|
| 2016 |
Heshmati Y, Turköz G, Harisankar A, Linnarsson S, Dimitriou M, Sinha I, Lehmann S, Qian H, Walfridsson J. Identification of CHD4 As a Potential Therapeutic Target of Acute Myeloid Leukemia Blood. 128: 1648-1648. DOI: 10.1182/Blood.V128.22.1648.1648 |
0.403 |
|
| 2015 |
Fuzik J, Zeisel A, Máté Z, Calvigioni D, Yanagawa Y, Szabó G, Linnarsson S, Harkany T. Integration of electrophysiological recordings with single-cell RNA-seq data identifies neuronal subtypes. Nature Biotechnology. PMID 26689544 DOI: 10.1038/Nbt.3443 |
0.766 |
|
| 2015 |
Füllgrabe A, Joost S, Are A, Jacob T, Sivan U, Haegebarth A, Linnarsson S, Simons BD, Clevers H, Toftgård R, Kasper M. Dynamics of Lgr6(+) Progenitor Cells in the Hair Follicle, Sebaceous Gland, and Interfollicular Epidermis. Stem Cell Reports. PMID 26607954 DOI: 10.1016/J.Stemcr.2015.09.013 |
0.4 |
|
| 2015 |
Linnarsson S. NEUROSCIENCE. A tree of the human brain. Science (New York, N.Y.). 350: 37. PMID 26430106 DOI: 10.1126/Science.Aad2792 |
0.414 |
|
| 2015 |
Töhönen V, Katayama S, Vesterlund L, Jouhilahti EM, Sheikhi M, Madissoon E, Filippini-Cattaneo G, Jaconi M, Johnsson A, Bürglin TR, Linnarsson S, Hovatta O, Kere J. Novel PRD-like homeodomain transcription factors and retrotransposon elements in early human development. Nature Communications. 6: 8207. PMID 26360614 DOI: 10.1038/Ncomms9207 |
0.427 |
|
| 2015 |
Linnarsson S. Sequencing Single Cells Reveals Sequential Stem Cell States. Cell Stem Cell. 17: 251-2. PMID 26340522 DOI: 10.1016/J.Stem.2015.08.016 |
0.399 |
|
| 2015 |
Chantzoura E, Skylaki S, Menendez S, Kim SI, Johnsson A, Linnarsson S, Woltjen K, Chambers I, Kaji K. Reprogramming Roadblocks Are System Dependent. Stem Cell Reports. 5: 350-64. PMID 26278041 DOI: 10.1016/J.Stemcr.2015.07.007 |
0.312 |
|
| 2015 |
Katayama S, Skoog T, Jouhilahti EM, Siitonen HA, Nuutila K, Tervaniemi MH, Vuola J, Johnsson A, Lönnerberg P, Linnarsson S, Elomaa O, Kankuri E, Kere J. Gene expression analysis of skin grafts and cultured keratinocytes using synthetic RNA normalization reveals insights into differentiation and growth control. Bmc Genomics. 16: 476. PMID 26108968 DOI: 10.1186/S12864-015-1671-5 |
0.407 |
|
| 2015 |
Zeisel A, Muñoz-Manchado AB, Codeluppi S, Lönnerberg P, La Manno G, Juréus A, Marques S, Munguba H, He L, Betsholtz C, Rolny C, Castelo-Branco G, Hjerling-Leffler J, Linnarsson S. Brain structure. Cell types in the mouse cortex and hippocampus revealed by single-cell RNA-seq. Science (New York, N.Y.). 347: 1138-42. PMID 25700174 DOI: 10.1126/Science.Aaa1934 |
0.822 |
|
| 2015 |
Stäubert C, Bhuiyan H, Lindahl A, Broom OJ, Zhu Y, Islam S, Linnarsson S, Lehtiö J, Nordström A. Rewired metabolism in drug-resistant leukemia cells: a metabolic switch hallmarked by reduced dependence on exogenous glutamine. The Journal of Biological Chemistry. 290: 8348-59. PMID 25697355 DOI: 10.1074/Jbc.M114.618769 |
0.544 |
|
| 2015 |
Karlsson K, Sahlin E, Iwarsson E, Westgren M, Nordenskjöld M, Linnarsson S. Amplification-free sequencing of cell-free DNA for prenatal non-invasive diagnosis of chromosomal aberrations. Genomics. 105: 150-8. PMID 25543032 DOI: 10.1016/J.Ygeno.2014.12.005 |
0.767 |
|
| 2015 |
Romanov RA, Alpár A, Zhang MD, Zeisel A, Calas A, Landry M, Fuszard M, Shirran SL, Schnell R, Dobolyi Á, Oláh M, Spence L, Mulder J, Martens H, Palkovits M, ... ... Linnarsson S, et al. A secretagogin locus of the mammalian hypothalamus controls stress hormone release. The Embo Journal. 34: 36-54. PMID 25430741 DOI: 10.15252/Embj.201488977 |
0.68 |
|
| 2015 |
Usoskin D, Furlan A, Islam S, Abdo H, Lönnerberg P, Lou D, Hjerling-Leffler J, Haeggström J, Kharchenko O, Kharchenko PV, Linnarsson S, Ernfors P. Unbiased classification of sensory neuron types by large-scale single-cell RNA sequencing. Nature Neuroscience. 18: 145-53. PMID 25420068 DOI: 10.1038/Nn.3881 |
0.823 |
|
| 2015 |
Woll P, Kjällquist U, Chowdhury O, Doolittle H, Wedge D, Thongjuea S, Erlandsson R, Ngara M, Anderson K, Deng Q, Mead A, Stenson L, Giustacchini A, Duarte S, Giannoulatou E, ... ... Linnarsson S, et al. Myelodysplastic Syndromes Are Propagated by Rare and Distinct Human Cancer Stem Cells In Vivo Cancer Cell. 27: 603-605. DOI: 10.1016/J.Ccell.2015.03.003 |
0.317 |
|
| 2014 |
Wee S, Niklasson M, Marinescu VD, Segerman A, Schmidt L, Hermansson A, Dirks P, Forsberg-Nilsson K, Westermark B, Uhrbom L, Linnarsson S, Nelander S, Andäng M. Selective calcium sensitivity in immature glioma cancer stem cells. Plos One. 9: e115698. PMID 25531110 DOI: 10.1371/Journal.Pone.0115698 |
0.335 |
|
| 2014 |
Zechel S, Zajac P, Lönnerberg P, Ibáñez CF, Linnarsson S. Topographical transcriptome mapping of the mouse medial ganglionic eminence by spatially resolved RNA-seq. Genome Biology. 15: 486. PMID 25344199 DOI: 10.1186/S13059-014-0486-Z |
0.436 |
|
| 2014 |
Woll PS, Kjällquist U, Chowdhury O, Doolittle H, Wedge DC, Thongjuea S, Erlandsson R, Ngara M, Anderson K, Deng Q, Mead AJ, Stenson L, Giustacchini A, Duarte S, Giannoulatou E, ... ... Linnarsson S, et al. Myelodysplastic syndromes are propagated by rare and distinct human cancer stem cells in vivo. Cancer Cell. 25: 794-808. PMID 24835589 DOI: 10.1016/J.Ccr.2014.03.036 |
0.368 |
|
| 2014 |
Islam S, Zeisel A, Joost S, La Manno G, Zajac P, Kasper M, Lönnerberg P, Linnarsson S. Quantitative single-cell RNA-seq with unique molecular identifiers. Nature Methods. 11: 163-6. PMID 24363023 DOI: 10.1038/Nmeth.2772 |
0.801 |
|
| 2014 |
Chowdhury O, Woll PS, Kjällquist U, Doolittle H, Erlandsson R, Anderson K, Dybedal I, Mead A, Clark S, Holm MS, Hokland P, Nilsson L, Linnarsson S, Hellstrom-Lindberg E, Jacobsen SEW. Characterisation of the Stem and Progenitor Cell Hierarchy in Patients with CMML Blood. 124: 1896-1896. DOI: 10.1182/Blood.V124.21.1896.1896 |
0.357 |
|
| 2013 |
Zajac P, Islam S, Hochgerner H, Lönnerberg P, Linnarsson S. Base preferences in non-templated nucleotide incorporation by MMLV-derived reverse transcriptases. Plos One. 8: e85270. PMID 24392002 DOI: 10.1371/Journal.Pone.0085270 |
0.561 |
|
| 2013 |
Katayama S, Töhönen V, Linnarsson S, Kere J. SAMstrt: statistical test for differential expression in single-cell transcriptome with spike-in normalization. Bioinformatics (Oxford, England). 29: 2943-5. PMID 23995393 DOI: 10.1093/Bioinformatics/Btt511 |
0.471 |
|
| 2013 |
Abdelhady S, Kitambi SS, Lundin V, Aufschnaiter R, Sekyrova P, Sinha I, Lundgren KT, Castelo-Branco G, Linnarsson S, Wedlich-Söldner R, Teixeira A, Andäng M. Erg channel is critical in controlling cell volume during cell cycle in embryonic stem cells. Plos One. 8: e72409. PMID 23936540 DOI: 10.1371/Journal.Pone.0072409 |
0.41 |
|
| 2013 |
Shapiro E, Biezuner T, Linnarsson S. Single-cell sequencing-based technologies will revolutionize whole-organism science. Nature Reviews. Genetics. 14: 618-30. PMID 23897237 DOI: 10.1038/Nrg3542 |
0.433 |
|
| 2013 |
O'Malley J, Skylaki S, Iwabuchi KA, Chantzoura E, Ruetz T, Johnsson A, Tomlinson SR, Linnarsson S, Kaji K. High-resolution analysis with novel cell-surface markers identifies routes to iPS cells. Nature. 499: 88-91. PMID 23728301 DOI: 10.1038/Nature12243 |
0.446 |
|
| 2013 |
Linnarsson S. Single-cell biology meeting marks rebirth of an old science. Genome Biology. 14: 305. PMID 23607893 DOI: 10.1186/Gb-2013-14-4-305 |
0.382 |
|
| 2013 |
Woll P, Kjällquist U, Chowdhury O, Erlandsson R, Doolittle H, Ngara M, Anderson K, Giannoulatou E, Taylor S, Deng Q, Mead AJ, Scharenberg C, Mortera-Blanco T, Macaulay IC, Clark s, ... ... Linnarsson S, et al. Diverse Genetic Lesions In Myelodysplastic Syndromes Originate Exclusively In Rare MDS Stem Cells Blood. 122: 4195-4195. DOI: 10.1182/Blood.V122.21.4195.4195 |
0.392 |
|
| 2012 |
Lallemend F, Sterzenbach U, Hadjab-Lallemend S, Aquino JB, Castelo-Branco G, Sinha I, Villaescusa JC, Levanon D, Wang Y, Franck MC, Kharchenko O, Adameyko I, Linnarsson S, Groner Y, Turner E, et al. Positional differences of axon growth rates between sensory neurons encoded by Runx3. The Embo Journal. 31: 3718-29. PMID 22903063 DOI: 10.1038/Emboj.2012.228 |
0.783 |
|
| 2012 |
Jääger K, Islam S, Zajac P, Linnarsson S, Neuman T. RNA-seq analysis reveals different dynamics of differentiation of human dermis- and adipose-derived stromal stem cells. Plos One. 7: e38833. PMID 22723894 DOI: 10.1371/Journal.Pone.0038833 |
0.591 |
|
| 2012 |
Islam S, Kjällquist U, Moliner A, Zajac P, Fan JB, Lönnerberg P, Linnarsson S. Highly multiplexed and strand-specific single-cell RNA 5' end sequencing. Nature Protocols. 7: 813-28. PMID 22481528 DOI: 10.1038/Nprot.2012.022 |
0.617 |
|
| 2012 |
Fan JB, Chen J, April CS, Fisher JS, Klotzle B, Bibikova M, Kaper F, Ronaghi M, Linnarsson S, Ota T, Chien J, Laurent LC, Loring JF, Nisperos SV, Chen GY, et al. Highly parallel genome-wide expression analysis of single mammalian cells. Plos One. 7: e30794. PMID 22347404 DOI: 10.1371/Journal.Pone.0030794 |
0.458 |
|
| 2012 |
Kivioja T, Vähärautio A, Karlsson K, Bonke M, Enge M, Linnarsson S, Taipale J. Counting absolute numbers of molecules using unique molecular identifiers. Nature Methods. 9: 72-4. PMID 22101854 DOI: 10.1038/Nmeth.1778 |
0.776 |
|
| 2011 |
Islam S, Kjällquist U, Moliner A, Zajac P, Fan JB, Lönnerberg P, Linnarsson S. Characterization of the single-cell transcriptional landscape by highly multiplex RNA-seq. Genome Research. 21: 1160-7. PMID 21543516 DOI: 10.1101/Gr.110882.110 |
0.658 |
|
| 2010 |
Usoskin D, Zilberter M, Linnarsson S, Hjerling-Leffler J, Uhlén P, Harkany T, Ernfors P. En masse in vitro functional profiling of the axonal mechanosensitivity of sensory neurons. Proceedings of the National Academy of Sciences of the United States of America. 107: 16336-41. PMID 20736349 DOI: 10.1073/Pnas.0914705107 |
0.746 |
|
| 2010 |
Linnarsson S. Recent advances in DNA sequencing methods - general principles of sample preparation. Experimental Cell Research. 316: 1339-43. PMID 20211618 DOI: 10.1016/J.Yexcr.2010.02.036 |
0.3 |
|
| 2010 |
Fan J, Chen J, April C, Klotzle B, Royce T, Cann G, Talasaz AH, Islam S, Kjallquist U, Linnarsson S. Abstract 1149: Genetic analysis of single cells Cancer Research. 70: 1149-1149. DOI: 10.1158/1538-7445.Am10-1149 |
0.629 |
|
| 2009 |
Usoskin D, Linnarsson S, Uhlen P, Ernfors P. 324 DEVELOPMENT OF A NOVEL IN VITRO SYSTEM FOR THE STUDY OF MECHANORECEPTIVE COMPONENT IN NEUROPATHIC PAIN European Journal of Pain. 13: S99. DOI: 10.1016/S1090-3801(09)60327-X |
0.492 |
|
| 2004 |
Metsis A, Andersson U, Baurén G, Ernfors P, Lönnerberg P, Montelius A, Oldin M, Pihlak A, Linnarsson S. Whole-genome expression profiling through fragment display and combinatorial gene identification. Nucleic Acids Research. 32: e127. PMID 15356287 DOI: 10.1093/Nar/Gnh126 |
0.579 |
|
| 2001 |
Linnarsson S, Mikaels A, Baudet C, Ernfors P. Activation by GDNF of a transcriptional program repressing neurite growth in dorsal root ganglia. Proceedings of the National Academy of Sciences of the United States of America. 98: 14681-6. PMID 11724954 DOI: 10.1073/Pnas.251548898 |
0.638 |
|
| 2000 |
Linnarsson S, Willson CA, Ernfors P. Cell death in regenerating populations of neurons in BDNF mutant mice. Brain Research. Molecular Brain Research. 75: 61-9. PMID 10648888 DOI: 10.1016/S0169-328X(99)00295-8 |
0.634 |
|
| 1998 |
Ringstedt T, Linnarsson S, Wagner J, Lendahl U, Kokaia Z, Arenas E, Ernfors P, Ibáñez CF. BDNF regulates reelin expression and Cajal-Retzius cell development in the cerebral cortex. Neuron. 21: 305-15. PMID 9728912 DOI: 10.1016/S0896-6273(00)80540-1 |
0.695 |
|
| 1997 |
Linnarsson S, Björklund A, Ernfors P. Learning deficit in BDNF mutant mice. The European Journal of Neuroscience. 9: 2581-7. PMID 9517463 DOI: 10.1111/J.1460-9568.1997.Tb01687.X |
0.538 |
|
| 1995 |
Kucera J, Fan G, Jaenisch R, Linnarsson S, Ernfors P. Dependence of developing group Ia afferents on neurotrophin-3. The Journal of Comparative Neurology. 363: 307-20. PMID 8642077 DOI: 10.1002/Cne.903630211 |
0.573 |
|
| Show low-probability matches. |