Year |
Citation |
Score |
2021 |
Berger B, Waterman MS, Yu YW. Levenshtein Distance, Sequence Comparison and Biological Database Search. Ieee Transactions On Information Theory. 67: 3287-3294. PMID 34257466 DOI: 10.1109/tit.2020.2996543 |
0.304 |
|
2019 |
Zielezinski A, Girgis HZ, Bernard G, Leimeister CA, Tang K, Dencker T, Lau AK, Röhling S, Choi JJ, Waterman MS, Comin M, Kim SH, Vinga S, Almeida JS, Chan CX, et al. Benchmarking of alignment-free sequence comparison methods. Genome Biology. 20: 144. PMID 31345254 DOI: 10.1186/S13059-019-1755-7 |
0.596 |
|
2019 |
Chen S, Chen Y, Sun F, Waterman MS, Zhang X. A new statistic for efficient detection of repetitive sequences. Bioinformatics (Oxford, England). PMID 30993316 DOI: 10.1093/Bioinformatics/Btz262 |
0.614 |
|
2017 |
Bai X, Tang K, Ren J, Waterman M, Sun F. Optimal choice of word length when comparing two Markov sequences using a χ (2)-statistic. Bmc Genomics. 18: 732. PMID 28984181 DOI: 10.1186/S12864-017-4020-Z |
0.622 |
|
2017 |
Lu YY, Tang K, Ren J, Fuhrman JA, Waterman MS, Sun F. CAFE: aCcelerated Alignment-FrEe sequence analysis. Nucleic Acids Research. PMID 28472388 DOI: 10.1093/Nar/Gkx351 |
0.613 |
|
2014 |
Liu CC, Tseng YT, Li W, Wu CY, Mayzus I, Rzhetsky A, Sun F, Waterman M, Chen JJ, Chaudhary PM, Loscalzo J, Crandall E, Zhou XJ. DiseaseConnect: a comprehensive web server for mechanism-based disease-disease connections. Nucleic Acids Research. 42: W137-46. PMID 24895436 DOI: 10.1093/Nar/Gku412 |
0.524 |
|
2014 |
Song K, Ren J, Reinert G, Deng M, Waterman MS, Sun F. New developments of alignment-free sequence comparison: measures, statistics and next-generation sequencing. Briefings in Bioinformatics. 15: 343-53. PMID 24064230 DOI: 10.1093/Bib/Bbt067 |
0.637 |
|
2013 |
Behnam E, Waterman MS, Smith AD. A geometric interpretation for local alignment-free sequence comparison. Journal of Computational Biology : a Journal of Computational Molecular Cell Biology. 20: 471-85. PMID 23829649 DOI: 10.1089/Cmb.2012.0280 |
0.42 |
|
2012 |
Zhai Z, Reinert G, Song K, Waterman MS, Luan Y, Sun F. Normal and compound poisson approximations for pattern occurrences in NGS reads. Journal of Computational Biology : a Journal of Computational Molecular Cell Biology. 19: 839-54. PMID 22697250 DOI: 10.1089/Cmb.2012.0029 |
0.652 |
|
2011 |
Liu X, Wan L, Li J, Reinert G, Waterman MS, Sun F. New powerful statistics for alignment-free sequence comparison under a pattern transfer model. Journal of Theoretical Biology. 284: 106-16. PMID 21723298 DOI: 10.1016/J.Jtbi.2011.06.020 |
0.597 |
|
2011 |
Meng L, Sun F, Zhang X, Waterman MS. Sequence alignment as hypothesis testing. Journal of Computational Biology : a Journal of Computational Molecular Cell Biology. 18: 677-91. PMID 21554016 DOI: 10.1089/Cmb.2010.0328 |
0.601 |
|
2010 |
Schwartz DC, Waterman MS. New Generations: Sequencing Machines and Their Computational Challenges. Journal of Computer Science and Technology. 25: 3-9. PMID 22121326 DOI: 10.1007/S11390-010-9300-X |
0.353 |
|
2010 |
Wan L, Reinert G, Sun F, Waterman MS. Alignment-free sequence comparison (II): theoretical power of comparison statistics. Journal of Computational Biology : a Journal of Computational Molecular Cell Biology. 17: 1467-90. PMID 20973742 DOI: 10.1089/Cmb.2010.0056 |
0.585 |
|
2010 |
Teague B, Waterman MS, Goldstein S, Potamousis K, Zhou S, Reslewic S, Sarkar D, Valouev A, Churas C, Kidd JM, Kohn S, Runnheim R, Lamers C, Forrest D, Newton MA, et al. High-resolution human genome structure by single-molecule analysis. Proceedings of the National Academy of Sciences of the United States of America. 107: 10848-53. PMID 20534489 DOI: 10.1073/Pnas.0914638107 |
0.754 |
|
2010 |
Zhai Z, Ku SY, Luan Y, Reinert G, Waterman MS, Sun F. The power of detecting enriched patterns: an HMM approach. Journal of Computational Biology : a Journal of Computational Molecular Cell Biology. 17: 581-92. PMID 20426691 DOI: 10.1089/Cmb.2009.0218 |
0.594 |
|
2009 |
Reinert G, Chew D, Sun F, Waterman MS. Alignment-free sequence comparison (I): statistics and power. Journal of Computational Biology : a Journal of Computational Molecular Cell Biology. 16: 1615-34. PMID 20001252 DOI: 10.1089/Cmb.2009.0198 |
0.595 |
|
2009 |
Schnable PS, Ware D, Fulton RS, Stein JC, Wei F, Pasternak S, Liang C, Zhang J, Fulton L, Graves TA, Minx P, Reily AD, Courtney L, Kruchowski SS, Tomlinson C, ... ... Waterman M, et al. The B73 maize genome: complexity, diversity, and dynamics. Science (New York, N.Y.). 326: 1112-5. PMID 19965430 DOI: 10.1126/Science.1178534 |
0.367 |
|
2009 |
Zhou S, Wei F, Nguyen J, Bechner M, Potamousis K, Goldstein S, Pape L, Mehan MR, Churas C, Pasternak S, Forrest DK, Wise R, Ware D, Wing RA, Waterman MS, et al. A single molecule scaffold for the maize genome. Plos Genetics. 5: e1000711. PMID 19936062 DOI: 10.1371/Journal.Pgen.1000711 |
0.456 |
|
2009 |
Mehan MR, Nunez-Iglesias J, Kalakrishnan M, Waterman MS, Zhou XJ. An integrative network approach to map the transcriptome to the phenome. Journal of Computational Biology : a Journal of Computational Molecular Cell Biology. 16: 1023-34. PMID 19630539 DOI: 10.1089/Cmb.2009.0037 |
0.348 |
|
2009 |
Kim JH, Kim WC, Waterman MS, Park S, Li LM. HAPLOWSER: a whole-genome haplotype browser for personal genome and metagenome. Bioinformatics (Oxford, England). 25: 2430-1. PMID 19561337 DOI: 10.1093/Bioinformatics/Btp399 |
0.376 |
|
2009 |
Zhang MQ, Waterman MS, Zhang X. The Seventh Asia Pacific Bioinformatics Conference (APBC2009). Bmc Bioinformatics. 10: S1. PMID 19208108 DOI: 10.1186/1471-2105-10-S1-S1 |
0.314 |
|
2007 |
Kim JH, Waterman MS, Li LM. Diploid genome reconstruction of Ciona intestinalis and comparative analysis with Ciona savignyi. Genome Research. 17: 1101-10. PMID 17567986 DOI: 10.1101/Gr.5894107 |
0.438 |
|
2007 |
Li H, Valouev A, Schwartz DC, Waterman MS, Li LM. A quantile method for sizing optical maps. Journal of Computational Biology : a Journal of Computational Molecular Cell Biology. 14: 255-66. PMID 17563310 DOI: 10.1089/Cmb.2006.0006 |
0.752 |
|
2007 |
Reinert G, Waterman MS. On the length of the longest exact position match in a random sequence. Ieee/Acm Transactions On Computational Biology and Bioinformatics. 4: 153-6. PMID 17277422 DOI: 10.1109/Tcbb.2007.1023 |
0.426 |
|
2007 |
Kim JH, Waterman MS, Li LM. Accuracy assessment of diploid consensus sequences. Ieee/Acm Transactions On Computational Biology and Bioinformatics. 4: 88-97. PMID 17277416 DOI: 10.1109/Tcbb.2007.1007 |
0.401 |
|
2006 |
Valouev A, Schwartz DC, Zhou S, Waterman MS. An algorithm for assembly of ordered restriction maps from single DNA molecules. Proceedings of the National Academy of Sciences of the United States of America. 103: 15770-5. PMID 17043225 DOI: 10.1073/Pnas.0604040103 |
0.774 |
|
2006 |
Valouev A, Li L, Liu YC, Schwartz DC, Yang Y, Zhang Y, Waterman MS. Alignment of optical maps. Journal of Computational Biology : a Journal of Computational Molecular Cell Biology. 13: 442-62. PMID 16597251 DOI: 10.1089/Cmb.2006.13.442 |
0.748 |
|
2006 |
Valouev A, Zhang Y, Schwartz DC, Waterman MS. Refinement of optical map assemblies. Bioinformatics (Oxford, England). 22: 1217-24. PMID 16500933 DOI: 10.1093/Bioinformatics/Btl063 |
0.773 |
|
2005 |
Zhang Y, Waterman MS. An Eulerian path approach to local multiple alignment for DNA sequences. Proceedings of the National Academy of Sciences of the United States of America. 102: 1285-90. PMID 15668398 DOI: 10.1073/Pnas.0409240102 |
0.436 |
|
2005 |
Zhang K, Qin Z, Chen T, Liu JS, Waterman MS, Sun F. HapBlock: haplotype block partitioning and tag SNP selection software using a set of dynamic programming algorithms. Bioinformatics (Oxford, England). 21: 131-4. PMID 15333454 DOI: 10.1093/Bioinformatics/Bth482 |
0.549 |
|
2004 |
Li LM, Kim JH, Waterman MS. Haplotype reconstruction from SNP alignment. Journal of Computational Biology : a Journal of Computational Molecular Cell Biology. 11: 505-16. PMID 15285905 DOI: 10.1089/1066527041410454 |
0.35 |
|
2004 |
Zhang K, Qin ZS, Liu JS, Chen T, Waterman MS, Sun F. Haplotype block partitioning and tag SNP selection using genotype data and their applications to association studies. Genome Research. 14: 908-16. PMID 15078859 DOI: 10.1101/Gr.1837404 |
0.555 |
|
2004 |
Istrail S, Sutton GG, Florea L, Halpern AL, Mobarry CM, Lippert R, Walenz B, Shatkay H, Dew I, Miller JR, Flanigan MJ, Edwards NJ, Bolanos R, Fasulo D, Halldorsson BV, ... ... Waterman MS, et al. Whole-genome shotgun assembly and comparison of human genome assemblies. Proceedings of the National Academy of Sciences of the United States of America. 101: 1916-21. PMID 14769938 DOI: 10.1073/Pnas.0307971100 |
0.418 |
|
2003 |
Zhang Y, Waterman MS. DNA sequence assembly and multiple sequence alignment by an Eulerian path approach. Cold Spring Harbor Symposia On Quantitative Biology. 68: 205-212. PMID 15338619 DOI: 10.1101/Sqb.2003.68.205 |
0.422 |
|
2003 |
Zhang Y, Waterman MS. An Eulerian path approach to global multiple alignment for DNA sequences. Journal of Computational Biology : a Journal of Computational Molecular Cell Biology. 10: 803-19. PMID 14980012 DOI: 10.1089/106652703322756096 |
0.442 |
|
2003 |
Li X, Waterman MS. Estimating the repeat structure and length of DNA sequences using L-tuples. Genome Research. 13: 1916-22. PMID 12902383 DOI: 10.1101/Gr.1251803 |
0.389 |
|
2003 |
Zhang K, Sun F, Waterman MS, Chen T. Haplotype block partition with limited resources and applications to human chromosome 21 haplotype data. American Journal of Human Genetics. 73: 63-73. PMID 12802783 DOI: 10.1086/376437 |
0.587 |
|
2002 |
Lippert RA, Huang H, Waterman MS. Distributional regimes for the number of k-word matches between two random sequences. Proceedings of the National Academy of Sciences of the United States of America. 99: 13980-9. PMID 12374863 DOI: 10.1073/Pnas.202468099 |
0.359 |
|
2002 |
Zhang K, Deng M, Chen T, Waterman MS, Sun F. A dynamic programming algorithm for haplotype block partitioning. Proceedings of the National Academy of Sciences of the United States of America. 99: 7335-9. PMID 12032283 DOI: 10.1073/Pnas.102186799 |
0.547 |
|
2002 |
Tang M, Waterman M, Yooseph S. Zinc finger gene clusters and tandem gene duplication. Journal of Computational Biology : a Journal of Computational Molecular Cell Biology. 9: 429-46. PMID 12015891 DOI: 10.1089/10665270252935557 |
0.726 |
|
2001 |
Pevzner PA, Tang H, Waterman MS. An Eulerian path approach to DNA fragment assembly. Proceedings of the National Academy of Sciences of the United States of America. 98: 9748-53. PMID 11504945 DOI: 10.1073/Pnas.171285098 |
0.579 |
|
2001 |
Tang M, Waterman MS. Local matching of random restriction maps Journal of Applied Probability. 38: 335-356. DOI: 10.1239/Jap/996986748 |
0.757 |
|
2000 |
Reinert G, Schbath S, Waterman MS. Probabilistic and Statistical Properties of Words: An Overview Journal of Computational Biology. 7: 1-46. PMID 10890386 DOI: 10.1089/10665270050081360 |
0.393 |
|
1998 |
Lee JK, Dancík V, Waterman MS. Estimation for restriction sites observed by optical mapping using reversible-jump Markov Chain Monte Carlo. Journal of Computational Biology. 5: 505-515. PMID 9773346 DOI: 10.1089/Cmb.1998.5.505 |
0.374 |
|
1998 |
Waterman MS. Introduction to Computational Biology: Maps, Sequences and Genomes. Biometrics. 54: 398. DOI: 10.2307/2534039 |
0.438 |
|
1997 |
Sun F, Benson G, Arnheim N, Waterman M. Pooling strategies for establishing physical genome maps using FISH Journal of Computational Biology. 4: 467-486. PMID 9385540 DOI: 10.1089/Cmb.1997.4.467 |
0.553 |
|
1997 |
Sun F, Waterman MS. Whole Genome Amplification And Branching Processes Advances in Applied Probability. 29: 629-668. DOI: 10.2307/1428080 |
0.63 |
|
1997 |
Dancik V, Waterman MS. Simple Maximum Likelihood Methods for the Optical Mapping Problem Genome Informatics. 8: 1-8. DOI: 10.11234/Gi1990.8.1 |
0.347 |
|
1997 |
Waterman MS, Istrail S, Pevzner PA. Preface: Special RECOMB'97 Issues Journal of Computational Biology. 4: 215-215. DOI: 10.1089/Cmb.1997.4.215 |
0.46 |
|
1996 |
Arratia R, Martin D, Reinert G, Waterman MS. Poisson Process Approximation for Sequence Repeats, and Sequencing by Hybridization Journal of Computational Biology. 3: 425-463. PMID 8891959 DOI: 10.1089/Cmb.1996.3.425 |
0.391 |
|
1996 |
Sun F, Galas D, Waterman MS. A Mathematical Analysis ofin VitroMolecular Selection – Amplification Journal of Molecular Biology. 258: 650-660. PMID 8636999 DOI: 10.1006/Jmbi.1996.0276 |
0.533 |
|
1996 |
Steel M, Goldstein L, Waterman MS. A Central Limit Theorem For The Parsimony Length Of Trees Advances in Applied Probability. 28: 1051-1071. DOI: 10.2307/1428164 |
0.314 |
|
1996 |
Vingron M, Waterman MS. Alignment networks and electrical networks Discrete Applied Mathematics. 71: 297-309. DOI: 10.1016/S0166-218X(96)00070-4 |
0.3 |
|
1995 |
Port E, Sun F, Martin D, Waterman MS. Genomic mapping by end-characterized random clones: a mathematical analysis. Genomics. 26: 84-100. PMID 7782090 DOI: 10.1016/0888-7543(95)80086-2 |
0.645 |
|
1995 |
Sun F, Arnheim N, Waterman MS. Whole genome amplification of single cells: Mathematical analysis of PEP and tagged PCR Nucleic Acids Research. 23: 3034-3040. PMID 7659528 DOI: 10.1093/Nar/23.15.3034 |
0.575 |
|
1995 |
Idury RM, Waterman MS. A new algorithm for DNA sequence assembly. Journal of Computational Biology. 2: 291-306. PMID 7497130 DOI: 10.1089/Cmb.1995.2.291 |
0.422 |
|
1995 |
Pevzner PA, Waterman MS. Multiple filtration and approximate pattern matching Algorithmica. 13: 135-154. DOI: 10.1007/Bf01188584 |
0.551 |
|
1994 |
Goldstein L, Waterman MS. Approximations to profile score distributions. Journal of Computational Biology. 1: 93-104. PMID 8790456 DOI: 10.1089/Cmb.1994.1.93 |
0.319 |
|
1994 |
Vingron M, Waterman MS. Sequence alignment and penalty choice. Review of concepts, case studies and implications. Journal of Molecular Biology. 235: 1-12. PMID 8289235 DOI: 10.1016/S0022-2836(05)80006-3 |
0.387 |
|
1994 |
Waterman MS, Vingron M. Rapid and accurate estimates of statistical significance for sequence data base searches. Proceedings of the National Academy of Sciences of the United States of America. 91: 4625-4628. PMID 8197109 DOI: 10.1073/Pnas.91.11.4625 |
0.404 |
|
1994 |
Benson G, Waterman MS. A method for fast database search for all k-nucleotide repeats Nucleic Acids Research. 22: 4828-4836. PMID 7984436 DOI: 10.1093/Nar/22.22.4828 |
0.36 |
|
1994 |
Waterman M. Estimating statistical significance of sequence alignments Philosophical Transactions of the Royal Society B. 344: 383-390. PMID 7800708 DOI: 10.1098/Rstb.1994.0077 |
0.384 |
|
1994 |
Waterman MS, Vingron M. Sequence Comparison Significance and Poisson Approximation Statistical Science. 9: 367-381. DOI: 10.1214/Ss/1177010382 |
0.408 |
|
1994 |
Arratia R, Waterman MS. A Phase Transition for the Score in Matching Random Sequences Allowing Deletions Annals of Applied Probability. 4: 200-225. DOI: 10.1214/Aoap/1177005208 |
0.318 |
|
1993 |
Waterman MS, Haeseler Av. Designer algorithms for cryptogene searches New Zealand Journal of Botany. 31: 269-273. DOI: 10.1080/0028825X.1993.10419504 |
0.336 |
|
1993 |
Pevzner PA, Waterman MS. Generalized Sequence Alignment and Duality Advances in Applied Mathematics. 14: 139-171. DOI: 10.1006/Aama.1993.1008 |
0.565 |
|
1992 |
Arratia R, Lander ES, Tavaré S, Waterman MS. Genomic mapping by anchoring random clones: a mathematical analysis. Genomics. 11: 806-27. PMID 1783390 DOI: 10.1016/0888-7543(91)90004-X |
0.614 |
|
1992 |
Goldstein L, Waterman MS. Poisson, compound Poisson and process approximations for testing statistical significance in sequence comparisons. Bulletin of Mathematical Biology. 54: 785-812. PMID 1638260 DOI: 10.1007/Bf02459930 |
0.432 |
|
1992 |
Waterman MS, Eggert M, Lander E. Parametric sequence comparisons. Proceedings of the National Academy of Sciences of the United States of America. 89: 6090-6093. PMID 1631095 DOI: 10.1073/Pnas.89.13.6090 |
0.347 |
|
1992 |
von Haeseler A, Blum B, Simpson L, Sturm N, Waterman MS. Computer methods for locating kinetoplastid cryptogenes. Nucleic Acids Research. 20: 2717-24. PMID 1614859 DOI: 10.1093/Nar/20.11.2717 |
0.388 |
|
1992 |
Huang X, Waterman MS. Dynamic programming algorithms for restriction map comparison. Bioinformatics. 8: 511-520. PMID 1422885 DOI: 10.1093/Bioinformatics/8.5.511 |
0.366 |
|
1992 |
Churchill GA, Waterman MS. The accuracy of DNA sequences: estimating sequence quality. Genomics. 14: 89-98. PMID 1358801 DOI: 10.1016/S0888-7543(05)80288-5 |
0.424 |
|
1992 |
Schöniger M, Waterman MS. A local algorithm for dna sequence alignment with inversions Bulletin of Mathematical Biology. 54: 521-536. DOI: 10.1016/S0092-8240(05)80075-8 |
0.377 |
|
1991 |
Schmitt W, Waterman MS. Multiple solutions of DNA restriction mapping problems Advances in Applied Mathematics. 12: 412-427. DOI: 10.1016/0196-8858(91)90028-H |
0.371 |
|
1990 |
Churchill GA, Daniels DL, Waterman MS. The distribution of restriction enzyme sites in Escherichia coli. Nucleic Acids Research. 18: 589-97. PMID 2408016 DOI: 10.1093/Nar/18.3.589 |
0.373 |
|
1990 |
Waterman MS. Genomic sequence databases. Genomics. 6: 700-701. PMID 2341159 DOI: 10.1016/0888-7543(90)90508-R |
0.393 |
|
1990 |
Waterman MS, Jones R. Consensus methods for DNA and protein sequence alignment. Methods in Enzymology. 183: 221-237. PMID 2314276 DOI: 10.1016/0076-6879(90)83016-3 |
0.418 |
|
1990 |
Tang B, Waterman MS. The expected fraction of clonable genomic DNA. Bulletin of Mathematical Biology. 52: 455-475. PMID 2198972 DOI: 10.1007/Bf02458581 |
0.385 |
|
1990 |
Branscomb E, Slezak T, Pae R, Galas D, Carrano AV, Waterman M. Optimizing restriction fragment fingerprinting methods for ordering large genomic libraries. Genomics. 8: 351-366. PMID 1979055 DOI: 10.1016/0888-7543(90)90293-4 |
0.394 |
|
1990 |
Arratia R, Gordon L, Waterman MS. The Erdos-Renyi Law in Distribution, for Coin Tossing and Sequence Matching Annals of Statistics. 18: 539-570. DOI: 10.1214/Aos/1176347615 |
0.354 |
|
1990 |
Griggs JR, Hanlon P, Odlyzko AM, Waterman MS. On the number of alignments ofk sequences Graphs and Combinatorics. 6: 133-146. DOI: 10.1007/Bf01787724 |
0.353 |
|
1989 |
Waterman MS. Mathematical Methods for DNA Sequences Biometrics. 46: 882. DOI: 10.2307/2532117 |
0.352 |
|
1989 |
Arratia R, Waterman MS. The Erdos-Renyi Strong Law For Pattern Matching With A Given Proportion Of Mismatches Annals of Probability. 17: 1152-1169. DOI: 10.1214/Aop/1176991262 |
0.35 |
|
1988 |
Lander ES, Waterman MS. Genomic mapping by fingerprinting random clones: a mathematical analysis. Genomics. 2: 231-9. PMID 3294162 DOI: 10.1016/0888-7543(88)90007-9 |
0.372 |
|
1988 |
Waterman MS. [52] Computer analysis of nucleic acid sequences Methods in Enzymology. 164: 765-793. PMID 3071692 DOI: 10.1016/S0076-6879(88)64083-3 |
0.401 |
|
1987 |
Waterman MS, Gordon L, Arratia R. Phase transitions in sequence matches and nucleic acid structure Proceedings of the National Academy of Sciences of the United States of America. 84: 1239-1243. PMID 3469666 DOI: 10.1073/Pnas.84.5.1239 |
0.322 |
|
1987 |
Waterman MS, Eggert M. A new algorithm for best subsequence alignments with application to tRNA-rRNA comparisons. Journal of Molecular Biology. 197: 723-728. PMID 2448477 DOI: 10.1016/0022-2836(87)90478-5 |
0.372 |
|
1987 |
Goldstein L, Waterman MS. Mapping DNA by stochastic relaxation Advances in Applied Mathematics. 8: 194-207. DOI: 10.1016/0196-8858(87)90013-3 |
0.359 |
|
1987 |
Waterman MS, Raymond R. The match game: New stratigraphic correlation algorithms Mathematical Geosciences. 19: 109-127. DOI: 10.1007/Bf00898191 |
0.318 |
|
1986 |
Waterman MS. Multiple sequence alignment by consensus. Nucleic Acids Research. 14: 9095-9102. PMID 3786145 DOI: 10.1093/Nar/14.22.9095 |
0.417 |
|
1986 |
Waterman MS, Griggs JR. Interval graphs and maps of DNA Bulletin of Mathematical Biology. 48: 189-195. PMID 3719155 DOI: 10.1007/bf02460022 |
0.352 |
|
1986 |
Griggs JR, Hanlon PJ, Waterman MS. Sequence alignments with matched sections Siam Journal On Algebraic and Discrete Methods. 7: 604-608. DOI: 10.1137/0607067 |
0.378 |
|
1985 |
Galas DJ, Eggert M, Waterman MS. Rigorous Pattern-recognition Methods for DNA Sequences Analysis of Promoter Sequences from Escherichia coli Journal of Molecular Biology. 186: 117-128. PMID 3908689 DOI: 10.1016/0022-2836(85)90262-1 |
0.38 |
|
1985 |
Smith TF, Waterman MS, Burks C. The statistical distribution of nucleic acid similarities. Nucleic Acids Research. 13: 645-656. PMID 3871073 DOI: 10.1093/Nar/13.2.645 |
0.39 |
|
1985 |
Breen S, Waterman MS, Zhang N. Renewal theory for several patterns Journal of Applied Probability. 22: 228-234. DOI: 10.2307/3213763 |
0.324 |
|
1985 |
Arratia R, Waterman MS. Critical Phenomena in Sequence Matching Annals of Probability. 13: 1236-1249. DOI: 10.1214/Aop/1176992808 |
0.381 |
|
1984 |
Waterman MS. Efficient sequence alignment algorithms. Journal of Theoretical Biology. 108: 333-337. PMID 6748696 DOI: 10.1016/S0022-5193(84)80037-5 |
0.316 |
|
1984 |
Lipman DJ, Wilbur WJ, Smith TF, Waterman MS. On the statistical significance of nucleic add similarities Nucleic Acids Research. 12: 215-226. PMID 6694902 DOI: 10.1093/Nar/12.1Part1.215 |
0.348 |
|
1984 |
Waterman MS, Smith TF, Katcher HL. Algorithms for restriction map comparisons. Nucleic Acids Research. 12: 237-242. PMID 6320090 DOI: 10.1093/Nar/12.1Part1.237 |
0.37 |
|
1984 |
Waterman MS, Perlwitz MD. Line geometries for sequence comparisons Bulletin of Mathematical Biology. 46: 567-577. DOI: 10.1016/S0092-8240(84)80060-9 |
0.406 |
|
1984 |
Waterman MS, Arratia R, Galas DJ. Pattern recognition in several sequences: Consensus and alignment Bulletin of Mathematical Biology. 46: 515-527. DOI: 10.1016/S0092-8240(84)80056-7 |
0.36 |
|
1984 |
Waterman MS. General methods of sequence comparison Bulletin of Mathematical Biology. 46: 473-500. DOI: 10.1016/S0092-8240(84)80054-3 |
0.395 |
|
1983 |
Waterman MS. Sequence alignments in the neighborhood of the optimum with general application to dynamic programming. Proceedings of the National Academy of Sciences of the United States of America. 80: 3123-3124. PMID 16593315 DOI: 10.1073/Pnas.80.10.3123 |
0.379 |
|
1983 |
Smith TF, Waterman MS, Sadler JR. Statistical characterization of nucleic acid sequence functional domains Nucleic Acids Research. 11: 2205-2220. PMID 6835847 DOI: 10.1093/Nar/11.7.2205 |
0.338 |
|
1983 |
Sadler JR, Waterman MS, Smith TF. Regulatory pattern Identification in nucleic acid sequences Nucleic Acids Research. 11: 2221-2232. PMID 6340068 DOI: 10.1093/Nar/11.7.2221 |
0.404 |
|
1982 |
Lipman DJ, Smith TF, Beckman RJ, Waterman MS. Hierarchical analysis of influenza A hemagglutinin gene sequences Nucleic Acids Research. 10: 5375-5389. PMID 7145705 DOI: 10.1093/Nar/10.17.5375 |
0.374 |
|
1982 |
Smith TF, Waterman MS, Fitch WM. Comparative biosequence metrics Journal of Molecular Evolution. 18: 423. DOI: 10.1007/Bf01733210 |
0.385 |
|
1981 |
Smith TF, Waterman MS. Comparison of biosequences Advances in Applied Mathematics. 2: 482-489. DOI: 10.1016/0196-8858(81)90046-4 |
0.35 |
|
1980 |
Smith TF, Waterman MS. New Stratigraphic Correlation Techniques The Journal of Geology. 88: 451-457. DOI: 10.1086/628528 |
0.377 |
|
1980 |
Smith TF, Waterman MS. Protein constraints induced by multiframe encoding Mathematical Biosciences. 49: 17-26. DOI: 10.1016/0025-5564(80)90108-X |
0.311 |
|
1979 |
Stein PR, Waterman MS. On some new sequences generalizing the Catalan and Motzkin numbers Discrete Mathematics. 26: 261-272. DOI: 10.1016/0012-365X(79)90033-5 |
0.363 |
|
1976 |
Waterman MS. On the approximation of invariant measures for continued fractions Rocky Mountain Journal of Mathematics. 6: 181-190. DOI: 10.1216/Rmj-1976-6-1-181 |
0.324 |
|
1976 |
Waterman MS, Smith TF, Beyer WA. Some Biological Sequence Metrics Advances in Mathematics. 20: 367-387. DOI: 10.1016/0001-8708(76)90202-4 |
0.399 |
|
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