Year |
Citation |
Score |
2020 |
Park S, Cho K. Achieving a global objective with competing networked agents in the framework of discrete event systems International Journal of Control. 93: 889-897. DOI: 10.1080/00207179.2018.1521007 |
0.326 |
|
2019 |
Lee D, Cho KH. Signal flow control of complex signaling networks. Scientific Reports. 9: 14289. PMID 31582789 DOI: 10.1038/S41598-019-50790-0 |
0.333 |
|
2019 |
Choo SM, Park SM, Cho KH. Minimal intervening control of biomolecular networks leading to a desired cellular state. Scientific Reports. 9: 13124. PMID 31511585 DOI: 10.1038/S41598-019-49571-6 |
0.346 |
|
2019 |
Lee B, Kang U, Chang H, Cho KH. The Hidden Control Architecture of Complex Brain Networks. Iscience. 13: 154-162. PMID 30844695 DOI: 10.1016/J.Isci.2019.02.017 |
0.31 |
|
2018 |
Joo JI, Zhou JX, Huang S, Cho KH. Determining Relative Dynamic Stability of Cell States Using Boolean Network Model. Scientific Reports. 8: 12077. PMID 30104572 DOI: 10.1038/S41598-018-30544-0 |
0.31 |
|
2018 |
Yang JM, Lee CK, Cho KH. Global Stabilization of Boolean Networks to Control the Heterogeneity of Cellular Responses. Frontiers in Physiology. 9: 774. PMID 30072906 DOI: 10.3389/Fphys.2018.00774 |
0.388 |
|
2018 |
Choo SM, Ban B, Joo JI, Cho KH. The phenotype control kernel of a biomolecular regulatory network. Bmc Systems Biology. 12: 49. PMID 29622038 DOI: 10.1186/S12918-018-0576-8 |
0.336 |
|
2018 |
Lee D, Cho KH. Topological estimation of signal flow in complex signaling networks. Scientific Reports. 8: 5262. PMID 29588498 DOI: 10.1038/S41598-018-23643-5 |
0.307 |
|
2018 |
Park D, Lee HS, Kang JH, Kim SM, Gong JR, Cho KH. Attractor landscape analysis of the cardiac signaling network reveals mechanism-based therapeutic strategies for heart failure. Journal of Molecular Cell Biology. PMID 29579284 DOI: 10.1093/Jmcb/Mjy019 |
0.315 |
|
2017 |
Choi M, Shi J, Zhu Y, Yang R, Cho KH. Network dynamics-based cancer panel stratification for systemic prediction of anticancer drug response. Nature Communications. 8: 1940. PMID 29208897 DOI: 10.1038/S41467-017-02160-5 |
0.324 |
|
2017 |
Kang JH, Cho KH. A novel interaction perturbation analysis reveals a comprehensive regulatory principle underlying various biochemical oscillators. Bmc Systems Biology. 11: 95. PMID 29017496 DOI: 10.1186/S12918-017-0472-7 |
0.303 |
|
2017 |
Kang JH, Lee HS, Park D, Kang YW, Kim SM, Gong JR, Cho KH. Context-independent essential regulatory interactions for apoptosis and hypertrophy in the cardiac signaling network. Scientific Reports. 7: 34. PMID 28232733 DOI: 10.1038/S41598-017-00086-Y |
0.314 |
|
2017 |
Cho K, Lee S, Kim D, Shin D, Joo JI, Park S. Cancer reversion, a renewed challenge in systems biology Current Opinion in Systems Biology. 2: 49-58. DOI: 10.1016/J.Coisb.2017.01.005 |
0.335 |
|
2016 |
Choo SM, Cho KH. An efficient algorithm for identifying primary phenotype attractors of a large-scale Boolean network. Bmc Systems Biology. 10: 95. PMID 27717349 DOI: 10.1186/S12918-016-0338-4 |
0.334 |
|
2016 |
Cho KH, Joo JI, Shin D, Kim D, Park SM. The reverse control of irreversible biological processes. Wiley Interdisciplinary Reviews. Systems Biology and Medicine. PMID 27327189 DOI: 10.1002/Wsbm.1346 |
0.347 |
|
2016 |
Kim J, Cho K. Robustness Analysis of Network Modularity Ieee Transactions On Control of Network Systems. 3: 348-357. DOI: 10.1109/Tcns.2015.2476197 |
0.327 |
|
2015 |
Hong C, Hwang J, Cho KH, Shin I. An Efficient Steady-State Analysis Method for Large Boolean Networks with High Maximum Node Connectivity. Plos One. 10: e0145734. PMID 26716694 DOI: 10.1371/Journal.Pone.0145734 |
0.315 |
|
2015 |
Kim JR, Choo SM, Choi HS, Cho KH. Identification of Gene Networks with Time Delayed Regulation Based on Temporal Expression Profiles. Ieee/Acm Transactions On Computational Biology and Bioinformatics / Ieee, Acm. 12: 1161-8. PMID 26451827 DOI: 10.1109/Tcbb.2015.2394312 |
0.309 |
|
2015 |
Chu H, Lee D, Cho KH. Precritical State Transition Dynamics in the Attractor Landscape of a Molecular Interaction Network Underlying Colorectal Tumorigenesis. Plos One. 10: e0140172. PMID 26439385 DOI: 10.1371/Journal.Pone.0140172 |
0.3 |
|
2015 |
Kang JH, Lee HS, Kang YW, Cho KH. Systems biological approaches to the cardiac signaling network. Briefings in Bioinformatics. PMID 26108228 DOI: 10.1093/Bib/Bbv039 |
0.31 |
|
2015 |
Lee HS, Goh MJ, Kim J, Choi TJ, Kwang Lee H, Joo Na Y, Cho KH. A systems-biological study on the identification of safe and effective molecular targets for the reduction of ultraviolet B-induced skin pigmentation. Scientific Reports. 5: 10305. PMID 25980672 DOI: 10.1038/Srep10305 |
0.315 |
|
2015 |
Kim TH, Monsefi N, Song JH, von Kriegsheim A, Vandamme D, Pertz O, Kholodenko BN, Kolch W, Cho KH. Network-based identification of feedback modules that control RhoA activity and cell migration. Journal of Molecular Cell Biology. 7: 242-52. PMID 25780058 DOI: 10.1093/Jmcb/Mjv017 |
0.331 |
|
2015 |
Lee H, Cho K. Abstract B2-28: The development of an individualized Boolean network model for targeted anticancer therapy of glioblastoma Cancer Research. 75. DOI: 10.1158/1538-7445.Compsysbio-B2-28 |
0.33 |
|
2014 |
Kim J, Vandamme D, Kim JR, Munoz AG, Kolch W, Cho KH. Robustness and evolvability of the human signaling network. Plos Computational Biology. 10: e1003763. PMID 25077791 DOI: 10.1371/Journal.Pcbi.1003763 |
0.334 |
|
2013 |
Kim J, Park SM, Cho KH. Discovery of a kernel for controlling biomolecular regulatory networks. Scientific Reports. 3: 2223. PMID 23860463 DOI: 10.1038/Srep02223 |
0.351 |
|
2013 |
Cho KH. Signaling networks, network pathology and computational chemotherapy Oncotarget. 4: 178-179. PMID 23563503 DOI: 10.18632/Oncotarget.911 |
0.362 |
|
2013 |
Chaudhary SU, Shin SY, Lee D, Song JH, Cho KH. ELECANS--an integrated model development environment for multiscale cancer systems biology. Bioinformatics (Oxford, England). 29: 957-9. PMID 23390137 DOI: 10.1093/Bioinformatics/Btt063 |
0.688 |
|
2013 |
Yang I, Jung SH, Cho K. Self-Repairing Digital System With Unified Recovery Process Inspired by Endocrine Cellular Communication Ieee Transactions On Very Large Scale Integration (Vlsi) Systems. 21: 1027-1040. DOI: 10.1109/Tvlsi.2012.2203618 |
0.304 |
|
2012 |
Choi M, Shi J, Jung SH, Chen X, Cho KH. Attractor landscape analysis reveals feedback loops in the p53 network that control the cellular response to DNA damage. Science Signaling. 5: ra83. PMID 23169817 DOI: 10.1126/Scisignal.2003363 |
0.314 |
|
2012 |
Kim J, Choi M, Kim JR, Jin H, Kim VN, Cho KH. The co-regulation mechanism of transcription factors in the human gene regulatory network. Nucleic Acids Research. 40: 8849-61. PMID 22798495 DOI: 10.1093/Nar/Gks664 |
0.303 |
|
2012 |
Dong CY, Shin D, Joo S, Nam Y, Cho KH. Identification of feedback loops in neural networks based on multi-step Granger causality. Bioinformatics (Oxford, England). 28: 2146-53. PMID 22730429 DOI: 10.1093/Bioinformatics/Bts354 |
0.335 |
|
2012 |
Kim JR, Cho KH. The regulatory circuits for hysteretic switching in cellular signal transduction pathways Febs Journal. 279: 3329-3337. PMID 22564788 DOI: 10.1111/J.1742-4658.2012.08623.X |
0.307 |
|
2012 |
Kim MS, Kim JR, Kim D, Lander AD, Cho KH. Spatiotemporal network motif reveals the biological traits of developmental gene regulatory networks in Drosophila melanogaster. Bmc Systems Biology. 6: 31. PMID 22548745 DOI: 10.1186/1752-0509-6-31 |
0.333 |
|
2012 |
Dong CY, Cho KH. An optimally evolved connective ratio of neural networks that maximizes the occurrence of synchronized bursting behavior. Bmc Systems Biology. 6: 23. PMID 22462685 DOI: 10.1186/1752-0509-6-23 |
0.302 |
|
2011 |
Chaudhary SU, Shin SY, Won JK, Cho KH. Multiscale modeling of tumorigenesis induced by mitochondrial incapacitation in cell death. Ieee Transactions On Bio-Medical Engineering. 58: 3028-32. PMID 21690005 DOI: 10.1109/Tbme.2011.2159713 |
0.681 |
|
2011 |
Kim J, Kim J, Kwon Y, Lee H, Heslop-Harrison P, Cho K. Reduction of complex signaling networks to a representative kernel. Science Signaling. 4. PMID 21632468 DOI: 10.1126/Scisignal.2001390 |
0.318 |
|
2010 |
Kim TH, Kim J, Heslop-Harrison P, Cho KH. Evolutionary design principles and functional characteristics based on kingdom-specific network motifs. Bioinformatics (Oxford, England). 27: 245-51. PMID 21075744 DOI: 10.1093/Bioinformatics/Btq633 |
0.32 |
|
2010 |
Kim MS, Kim JR, Cho KH. Dynamic network rewiring determines temporal regulatory functions in Drosophila melanogaster development processes. Bioessays : News and Reviews in Molecular, Cellular and Developmental Biology. 32: 505-13. PMID 20486137 DOI: 10.1002/Bies.200900169 |
0.33 |
|
2009 |
Seo CH, Kim JR, Kim MS, Cho KH. Hub genes with positive feedbacks function as master switches in developmental gene regulatory networks Bioinformatics. 25: 1898-1904. PMID 19439566 DOI: 10.1093/Bioinformatics/Btp316 |
0.336 |
|
2009 |
Dong CY, Lim J, Nam Y, Cho KH. Systematic analysis of synchronized oscillatory neuronal networks reveals an enrichment for coupled direct and indirect feedback motifs. Bioinformatics (Oxford, England). 25: 1680-5. PMID 19389738 DOI: 10.1093/Bioinformatics/Btp271 |
0.343 |
|
2009 |
Park SJ, Cho KH. Delay-coobservability and its algebraic properties for the decentralized supervisory control of discrete event systems with communication delays Automatica. 45: 1252-1259. DOI: 10.1016/J.Automatica.2008.12.006 |
0.321 |
|
2009 |
Kim J, Valeyev NV, Postlethwaite I, Heslop-Harrison P, Cho K, Bates DG. Analysis and extension of a biochemical network model using robust control theory International Journal of Robust and Nonlinear Control. 20: 1017-1026. DOI: 10.1002/Rnc.1528 |
0.365 |
|
2008 |
Kim D, Kwon YK, Cho KH. The biphasic behavior of incoherent feed-forward loops in biomolecular regulatory networks. Bioessays : News and Reviews in Molecular, Cellular and Developmental Biology. 30: 1204-11. PMID 18937374 DOI: 10.1002/Bies.20839 |
0.321 |
|
2008 |
Kwon YK, Cho KH. Coherent coupling of feedback loops: A design principle of cell signaling networks Bioinformatics. 24: 1926-1932. PMID 18596076 DOI: 10.1093/Bioinformatics/Btn337 |
0.334 |
|
2008 |
Kim J, Kim T, Jung SH, Kim J, Park T, Heslop-Harrison P, Cho K. Evolutionary design principles of modules that control cellular differentiation Bioinformatics. 24: 1516-1522. PMID 18467345 DOI: 10.1093/Bioinformatics/Btn229 |
0.354 |
|
2008 |
Kim J, Bates DG, Postlethwaite I, Heslop-Harrison P, Cho K. Linear time-varying models can reveal non-linear interactions of biomolecular regulatory networks using multiple time-series data Bioinformatics. 24: 1286-1292. PMID 18367478 DOI: 10.1093/Bioinformatics/Btn107 |
0.329 |
|
2008 |
Kwon YK, Cho KH. Quantitative analysis of robustness and fragility in biological networks based on feedback dynamics Bioinformatics. 24: 987-994. PMID 18285369 DOI: 10.1093/Bioinformatics/Btn060 |
0.343 |
|
2008 |
Park SJ, Cho KH. Nonblocking supervisory control of timed discrete event systems under communication delays: The existence conditions Automatica. 44: 1011-1019. DOI: 10.1016/J.Automatica.2007.08.007 |
0.305 |
|
2008 |
Park SJ, Cho KH. Robust supervisory control of timed discrete event systems under partial observation based on eligible time bounds: The existence conditions Automatica. 44: 875-881. DOI: 10.1016/J.Automatica.2007.07.019 |
0.327 |
|
2007 |
Kwon YK, Cho KH. Analysis of feedback loops and robustness in network evolution based on Boolean models Bmc Bioinformatics. 8. PMID 17988389 DOI: 10.1186/1471-2105-8-430 |
0.345 |
|
2007 |
Kim JR, Yoon Y, Cho KH. Coupled feedback loops form dynamic motifs of cellular networks. Biophysical Journal. 94: 359-65. PMID 17951298 DOI: 10.1529/Biophysj.107.105106 |
0.321 |
|
2007 |
Kwon YK, Choi SS, Cho KH. Investigations into the relationship between feedback loops and functional importance of a signal transduction network based on Boolean network modeling. Bmc Bioinformatics. 8: 384. PMID 17935633 DOI: 10.1186/1471-2105-8-384 |
0.323 |
|
2007 |
Han S, Yoon Y, Cho KH. Inferring biomolecular interaction networks based on convex optimization. Computational Biology and Chemistry. 31: 347-54. PMID 17890159 DOI: 10.1016/J.Compbiolchem.2007.08.003 |
0.313 |
|
2007 |
Cho K, Choi H, Choo S. Unraveling the functional interaction structure of a biomolecular network through alternate perturbation of initial conditions. Journal of Biochemical and Biophysical Methods. 70: 701-707. PMID 17331585 DOI: 10.1016/J.Jbbm.2007.01.008 |
0.317 |
|
2007 |
Kwon YK, Cho KH. Boolean dynamics of biological networks with multiple coupled feedback loops Biophysical Journal. 92: 2975-2981. PMID 17259267 DOI: 10.1529/Biophysj.106.097097 |
0.346 |
|
2007 |
Assmus HE, Herwig R, Cho KH, Wolkenhauer O. Dynamics of biological systems: role of systems biology in medical research. Expert Review of Molecular Diagnostics. 6: 891-902. PMID 17140376 DOI: 10.1586/14737159.6.6.891 |
0.335 |
|
2007 |
Park SJ, Cho KH. Decentralized supervisory control of discrete event systems with communication delays based on conjunctive and permissive decision structures Automatica. 43: 738-743. DOI: 10.1016/J.Automatica.2006.10.016 |
0.302 |
|
2007 |
Park SJ, Cho KH. Decentralized supervisory control of nondeterministic discrete event systems: The existence condition of a robust and nonblocking supervisor Automatica. 43: 377-383. DOI: 10.1016/J.Automatica.2006.08.017 |
0.311 |
|
2006 |
Cho KH, Kim JR, Baek S, Choi HS, Choo SM. Inferring biomolecular regulatory networks from phase portraits of time-series expression profiles. Febs Letters. 580: 3511-8. PMID 16730002 DOI: 10.1016/J.Febslet.2006.05.035 |
0.311 |
|
2006 |
Cho DY, Cho KH, Zhang BT. Identification of biochemical networks by S-tree based genetic programming Bioinformatics. 22: 1631-1640. PMID 16585066 DOI: 10.1093/Bioinformatics/Btl122 |
0.339 |
|
2006 |
Park SJ, Cho KH. Delay-robust supervisory control of discrete-event systems with bounded communication delays Ieee Transactions On Automatic Control. 51: 911-915. DOI: 10.1109/Tac.2006.872834 |
0.34 |
|
2006 |
Park SJ, Cho KH. Supervisory control of timed discrete event systems under partial observation based on activity models and eligible time bounds Systems and Control Letters. 55: 407-413. DOI: 10.1016/J.Sysconle.2005.09.003 |
0.319 |
|
2005 |
Cho K, Choo S, Wellstead P, Wolkenhauer O. A unified framework for unraveling the functional interaction structure of a biomolecular network based on stimulus-response experimental data. Febs Letters. 579: 4520-4528. PMID 16083880 DOI: 10.1016/J.Febslet.2005.07.025 |
0.324 |
|
2005 |
Wolkenhauer O, Sreenath SN, Wellstead P, Ullah M, Cho KH. A systems- and signal-oriented approach to intracellular dynamics. Biochemical Society Transactions. 33: 507-15. PMID 15916553 DOI: 10.1042/Bst0330507 |
0.34 |
|
2005 |
Cho KH, Johansson KH, Wolkenhauer O. A hybrid systems framework for cellular processes Biosystems. 80: 273-282. PMID 15888342 DOI: 10.1016/J.Biosystems.2004.12.002 |
0.336 |
|
2005 |
Schmidt H, Cho KH, Jacobsen EW. Identification of small scale biochemical networks based on general type system perturbations. The Febs Journal. 272: 2141-51. PMID 15853799 DOI: 10.1111/J.1742-4658.2005.04605.X |
0.347 |
|
2005 |
Wolkenhauer O, Ullah M, Wellstead P, Cho KH. The dynamic systems approach to control and regulation of intracellular networks. Febs Letters. 579: 1846-53. PMID 15763562 DOI: 10.1016/J.Febslet.2005.02.008 |
0.349 |
|
2005 |
Zi Z, Cho KH, Sung MH, Xia X, Zheng J, Sun Z. In silico identification of the key components and steps in IFN-gamma induced JAK-STAT signaling pathway. Febs Letters. 579: 1101-8. PMID 15710397 DOI: 10.1016/J.Febslet.2005.01.009 |
0.314 |
|
2005 |
Kutalik Z, Cho KH, Wolkenhauer O. Optimal sampling time selection for parameter estimation in dynamic pathway modeling. Bio Systems. 75: 43-55. PMID 15245803 DOI: 10.1016/J.Biosystems.2004.03.007 |
0.31 |
|
2005 |
Park SJ, Lee MS, Shin SY, Cho KH, Lim JT, Cho BS, Jei YH, Kim MK, Park CH. Run-to-run overlay control of steppers in semiconductor manufacturing systems based on history data analysis and neural network modeling Ieee Transactions On Semiconductor Manufacturing. 18: 605-612. DOI: 10.1109/Tsm.2005.858530 |
0.628 |
|
2004 |
Wolkenhauer O, Ghosh BK, Cho K. Control and coordination in biochemical networks - Introduction to the special section on systems biology Ieee Control Systems Magazine. 24: 30-34. DOI: 10.1109/Mcs.2004.1316651 |
0.336 |
|
2004 |
Jung SH, Cho K. Identification of gene interaction networks based on evolutionary computation Ai & Society. 3397: 428-439. DOI: 10.1007/978-3-540-30583-5_46 |
0.304 |
|
2003 |
Cho KH, Wolkenhauer O. Analysis and modelling of signal transduction pathways in systems biology Biochemical Society Transactions. 31: 1503-1509. PMID 14641099 DOI: 10.1042/Bst0311503 |
0.335 |
|
2003 |
Wolkenhauer O, Kitano H, Cho KH. Systems biology Ieee Control Systems Magazine. 23: 38-48. DOI: 10.1109/Mcs.2003.1213602 |
0.318 |
|
2002 |
Cha J, Cho K. Synthesis of Deadlock-Free Ladder Diagrams for PLCs Based on Deadlock Detection and.Recovery (DDR) Algorithm Journal of Institute of Control Robotics and Systems. 8: 706-712. DOI: 10.5302/J.Icros.2002.8.8.706 |
0.305 |
|
2002 |
Kang B, Cho K. Discrete Event Model Conversion Algorithm for Systematic Analysis of Ladder Diagrams in PLCs Journal of Institute of Control Robotics and Systems. 8: 401-406. DOI: 10.5302/J.Icros.2002.8.5.401 |
0.324 |
|
2002 |
Kim Y, Cho K. Analytical Diagnosis of Single Crosstalk-Fault in Optical Multistage Interconnection Networks Journal of Institute of Control Robotics and Systems. 8: 256-263. DOI: 10.5302/J.Icros.2002.8.3.256 |
0.32 |
|
2002 |
Cho K, Kim B, Park K. Case study on rate-based traffic control of industrial networks employing LonWorks International Journal of Systems Science. 33: 161-164. DOI: 10.1080/00207720110091479 |
0.328 |
|
2000 |
Cho KH, Lim JT. Fault-tolerant supervisory control under C, D observability and its application International Journal of Systems Science. 31: 1573-1583. DOI: 10.1080/00207720050217340 |
0.621 |
|
2000 |
Cho K, Lim J. Multi-Agent Supervisory Control of Serial Production Systems for Complementary Fault-Tolerance* Ifac Proceedings Volumes. 33: 793-798. DOI: 10.1016/S1474-6670(17)39504-6 |
0.614 |
|
1999 |
Cho KH, Lim JT. On-line tracing supervisory control of discrete-event dynamic systems based on outlooking Automatica. 35: 1725-1729. DOI: 10.1016/S0005-1098(99)00084-9 |
0.617 |
|
1999 |
Cho K, Lim J. Brief Paper: Mixed centralized/decentralized supervisory control of discrete event dynamic systems Automatica. 35: 121-128. DOI: 10.1016/S0005-1098(98)00137-X |
0.632 |
|
1997 |
Cho K, Lim J. Fault-tolerant supervisory control of discrete event dynamical systems”“ International Journal of Systems Science. 28: 1001-1009. DOI: 10.1080/00207729708929463 |
0.616 |
|
1997 |
Cho K, Lim J. Stability and robustness of discrete event dynamic systems International Journal of Systems Science. 28: 691-703. DOI: 10.1080/00207729708929429 |
0.606 |
|
1997 |
Cho K, Lim J. Failure Analysis and Diagnosis Using Discrete Event Models: Theory and Case Study Ifac Proceedings Volumes. 30: 63-68. DOI: 10.1016/S1474-6670(17)42698-X |
0.616 |
|
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