Stephen Elisha Clarke, PhD - Related publications

Affiliations: 
2010-2017 Cellular and Molecular Medicine University of Ottawa, Ottawa, ON, Canada 
 2017- Bioengineering Stanford University, Palo Alto, CA 
Area:
Neuroscience
Website:
https://www.researchgate.net/profile/Stephen_Clarke14
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50 most relevant papers in past 60 days:
Year Citation  Score
2021 Strohl JJ, Gallagher JT, Gómez PN, Glynn JM, Huerta PT. Framework for automated sorting of neural spikes from Neuralynx-acquired tetrode recordings in freely-moving mice. Bioelectronic Medicine. 7: 17. PMID 34809706 DOI: 10.1186/s42234-021-00079-3   
2021 Schulz A, Miehl C, Berry MJ, Gjorgjieva J. The generation of cortical novelty responses through inhibitory plasticity. Elife. 10. PMID 34647889 DOI: 10.7554/eLife.65309   
2021 Lyall EH, Mossing DP, Pluta SR, Chu YW, Dudai A, Adesnik H. Synthesis of a comprehensive population code for contextual features in the awake sensory cortex. Elife. 10. PMID 34723796 DOI: 10.7554/eLife.62687   
2021 Jia S, Xing D, Yu Z, Liu JK. Dissecting cascade computational components in spiking neural networks. Plos Computational Biology. 17: e1009640. PMID 34843460 DOI: 10.1371/journal.pcbi.1009640   
2021 Gasior K, Korshunov K, Trombley PQ, Bertram R. Fast-slow analysis as a technique for understanding the neuronal response to current ramps. Journal of Computational Neuroscience. PMID 34665376 DOI: 10.1007/s10827-021-00799-0   
2021 Bauer J, Rose T. Mouse vision: Variability and stability across the visual processing hierarchy. Current Biology : Cb. 31: R1129-R1132. PMID 34637715 DOI: 10.1016/j.cub.2021.08.071   
2021 Hu F, Xu G, Zhang L, Wang H, Liu J, Chen Z, Zhou Y. Chronic bisphenol A exposure triggers visual perception dysfunction through impoverished neuronal coding ability in the primary visual cortex. Archives of Toxicology. PMID 34783864 DOI: 10.1007/s00204-021-03192-z   
2021 Zhu M, Yan Y, Cao X, Zeng F, Xu G, Shen W, Li F, Luo L, Wang Z, Zhang Y, Zhang X, Zhang D, Liu T. Electrophysiological and Morphological Features of Rebound Depolarization Characterized Interneurons in Rat Superficial Spinal Dorsal Horn. Frontiers in Cellular Neuroscience. 15: 736879. PMID 34621158 DOI: 10.3389/fncel.2021.736879   
2021 Wang K, Hu Q, Gao B, Lin Q, Zhuge FW, Zhang DY, Wang L, He YH, Scheicher RH, Tong H, Miao XS. Threshold switching memristor-based stochastic neurons for probabilistic computing. Materials Horizons. 8: 619-629. PMID 34821279 DOI: 10.1039/d0mh01759k   
2021 Woo J, Choi K, Kim SH, Han K, Choi M. Characterization of multiscale logic operations in the neural circuits. Frontiers in Bioscience (Landmark Edition). 26: 723-739. PMID 34719201 DOI: 10.52586/4983   
2021 Rathi N, Roy K. DIET-SNN: A Low-Latency Spiking Neural Network With Direct Input Encoding and Leakage and Threshold Optimization. Ieee Transactions On Neural Networks and Learning Systems. PMID 34596559 DOI: 10.1109/TNNLS.2021.3111897   
2021 Wu Z, Rockwell H, Zhang Y, Tang S, Lee TS. Complexity and diversity in sparse code priors improve receptive field characterization of Macaque V1 neurons. Plos Computational Biology. 17: e1009528. PMID 34695120 DOI: 10.1371/journal.pcbi.1009528   
2021 Wang Y, Chen X, Shen D, Zhang M, Chen X, Chen X, Shao W, Gu H, Xu J, Hu E, Wang L, Xu R, Tong Y. Artificial Neurons Based on Ag/VC/W Threshold Switching Memristors. Nanomaterials (Basel, Switzerland). 11. PMID 34835625 DOI: 10.3390/nano11112860   
2021 Dekkers MPJ, Salfelder F, Sanders T, Umuerri O, Cohen N, Jansen G. Plasticity in gustatory and nociceptive neurons controls decision making in C. elegans salt navigation. Communications Biology. 4: 1053. PMID 34504291 DOI: 10.1038/s42003-021-02561-9   
2021 Somervail R, Bufacchi RJ, Salvatori C, Neary-Zajiczek L, Guo Y, Novembre G, Iannetti GD. Brain Responses to Surprising Stimulus Offsets: Phenomenology and Functional Significance. Cerebral Cortex (New York, N.Y. : 1991). PMID 34668519 DOI: 10.1093/cercor/bhab352   
2021 Yamamoto K, Nakaya Y, Sugawara S, Kobayashi M. Synchronous inhibitory synaptic inputs to layer II/III pyramidal neurons in the murine barrel cortex. Brain Research. 1773: 147686. PMID 34637762 DOI: 10.1016/j.brainres.2021.147686   
2021 Petersen PC, Siegle JH, Steinmetz NA, Mahallati S, Buzsáki G. CellExplorer: A framework for visualizing and characterizing single neurons. Neuron. PMID 34592168 DOI: 10.1016/j.neuron.2021.09.002   
2021 Voitiuk K, Geng J, Keefe MG, Parks DF, Sanso SE, Hawthorne N, Freeman DB, Currie R, Mostajo-Radji MA, Pollen AA, Nowakowski TJ, Salama SR, Teodorescu M, Haussler D. Light-weight electrophysiology hardware and software platform for cloud-based neural recording experiments. Journal of Neural Engineering. PMID 34666315 DOI: 10.1088/1741-2552/ac310a   
2021 Chen XJ, Liu YH, Xu NL, Sun YG. Multiplexed representation of itch and mechanical and thermal sensation in the primary somatosensory cortex. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. PMID 34716234 DOI: 10.1523/JNEUROSCI.1445-21.2021   
2021 Medalla M, Chang W, Ibañez S, Guillamon-Vivancos T, Nittmann M, Kapitonava A, Busch SE, Moore TL, Rosene DL, Luebke JI. Layer-specific pyramidal neuron properties underlie diverse anterior cingulate cortical motor and limbic networks. Cerebral Cortex (New York, N.Y. : 1991). PMID 34613380 DOI: 10.1093/cercor/bhab347   
2021 Piette C, Vandecasteele M, Bosch-Bouju C, Goubard V, Paillé V, Cui Y, Mendes A, Perez S, Valtcheva S, Xu H, Pouget P, Venance L. Intracellular Properties of Deep-Layer Pyramidal Neurons in Frontal Eye Field of Macaque Monkeys. Frontiers in Synaptic Neuroscience. 13: 725880. PMID 34621162 DOI: 10.3389/fnsyn.2021.725880   
2021 Lagache T, Hanson A, Pérez-Ortega JE, Fairhall A, Yuste R. Tracking calcium dynamics from individual neurons in behaving animals. Plos Computational Biology. 17: e1009432. PMID 34624016 DOI: 10.1371/journal.pcbi.1009432   
2021 Han JK, Oh J, Yu JM, Choi SY, Choi YK. A Vertical Silicon Nanowire Based Single Transistor Neuron with Excitatory, Inhibitory, and Myelination Functions for Highly Scalable Neuromorphic Hardware. Small (Weinheim An Der Bergstrasse, Germany). e2103775. PMID 34605173 DOI: 10.1002/smll.202103775   
2021 Shao J, Liu Y, Gao D, Tu J, Yang F. Neural Burst Firing and Its Roles in Mental and Neurological Disorders. Frontiers in Cellular Neuroscience. 15: 741292. PMID 34646123 DOI: 10.3389/fncel.2021.741292   
2021 Imambocus BN, Zhou F, Formozov A, Wittich A, Tenedini FM, Hu C, Sauter K, Macarenhas Varela E, Herédia F, Casimiro AP, Macedo A, Schlegel P, Yang CH, Miguel-Aliaga I, Wiegert JS, et al. A neuropeptidergic circuit gates selective escape behavior of Drosophila larvae. Current Biology : Cb. PMID 34798050 DOI: 10.1016/j.cub.2021.10.069   
2021 Beetz MJ, Kraus C, Franzke M, Dreyer D, Strube-Bloss MF, Rössler W, Warrant EJ, Merlin C, El Jundi B. Flight-induced compass representation in the monarch butterfly heading network. Current Biology : Cb. PMID 34822766 DOI: 10.1016/j.cub.2021.11.009   
2021 Stefani SP, Pastras CJ, Serrador JM, Breen PP, Camp AJ. Stochastic and sinusoidal electrical stimuli increase the irregularity and gain of Type A and B medial vestibular nucleus neurons, in vitro. Journal of Neuroscience Research. PMID 34510506 DOI: 10.1002/jnr.24957   
2021 Engel TA, Schölvinck ML, Lewis CM. The diversity and specificity of functional connectivity across spatial and temporal scales. Neuroimage. 245: 118692. PMID 34751153 DOI: 10.1016/j.neuroimage.2021.118692   
2021 Kim JH, Ryu JR, Lee B, Chae U, Son JW, Park BH, Cho IJ, Sun W. Interpreting the Entire Connectivity of Individual Neurons in Micropatterned Neural Culture With an Integrated Connectome Analyzer of a Neuronal Network (iCANN). Frontiers in Neuroanatomy. 15: 746057. PMID 34744642 DOI: 10.3389/fnana.2021.746057   
2021 Hormigo S, Zhou J, Castro-Alamancos MA. Bidirectional control of orienting behavior by the substantia nigra pars reticulata: distinct significance of head and whisker movements. Eneuro. PMID 34544763 DOI: 10.1523/ENEURO.0165-21.2021   
2021 Baker V, Cruz L. Traveling Waves in Quasi-One-Dimensional Neuronal Minicolumns. Neural Computation. 1-26. PMID 34758481 DOI: 10.1162/neco_a_01451   
2021 Mehrabbeik M, Parastesh F, Ramadoss J, Rajagopal K, Namazi H, Jafari S. Synchronization and chimera states in the network of electrochemically coupled memristive Rulkov neuron maps. Mathematical Biosciences and Engineering : Mbe. 18: 9394-9409. PMID 34814351 DOI: 10.3934/mbe.2021462   
2021 Shen T, Lur G, Xu X, Yu Z. To Deconvolve, or Not to Deconvolve: Inferences of Neuronal Activities using Calcium Imaging Data. Journal of Neuroscience Methods. 109431. PMID 34856319 DOI: 10.1016/j.jneumeth.2021.109431   
2021 Nicholas S, Nordström K. Efference copies: Context matters when ignoring self-induced motion. Current Biology : Cb. 31: R1388-R1390. PMID 34699803 DOI: 10.1016/j.cub.2021.09.016   
2021 Brughera A, Ballestero JA, McAlpine D. Sensitivity to Envelope Interaural Time Differences: Modeling Auditory Modulation Filtering. Journal of the Association For Research in Otolaryngology : Jaro. PMID 34741225 DOI: 10.1007/s10162-021-00816-0   
2021 Levi R, Valderhaug VD, Castelbuono S, Sandvig A, Sandvig I, Barbieri R. Bayesian supervised machine learning classification of neural networks with pathological perturbations. Biomedical Physics & Engineering Express. 7. PMID 34551397 DOI: 10.1088/2057-1976/ac2935   
2021 Wang L, Ge C, Wang F, Guo Z, Hong W, Jiang C, Ji B, Wang M, Li C, Sun B, Liu J. Dense Packed Drivable Optrode Array for Precise Optical Stimulation and Neural Recording in Multiple-Brain Regions. Acs Sensors. PMID 34779610 DOI: 10.1021/acssensors.1c01650   
2021 Shindo Y, Fujita K, Tanaka M, Fujio H, Hotta K, Oka K. Mechanical stimulus-evoked signal transduction between keratinocytes and sensory neurons via extracellular ATP. Biochemical and Biophysical Research Communications. 582: 131-136. PMID 34710828 DOI: 10.1016/j.bbrc.2021.10.046   
2021 Joo P, Lee H, Wang S, Kim S, Hudetz AG. Network Model With Reduced Metabolic Rate Predicts Spatial Synchrony of Neuronal Activity. Frontiers in Computational Neuroscience. 15: 738362. PMID 34690730 DOI: 10.3389/fncom.2021.738362   
2021 Bausch M, Niediek J, Reber TP, Mackay S, Boström J, Elger CE, Mormann F. Concept neurons in the human medial temporal lobe flexibly represent abstract relations between concepts. Nature Communications. 12: 6164. PMID 34697305 DOI: 10.1038/s41467-021-26327-3   
2021 Huan Y, Gill JP, Fritzinger JB, Patel PR, Richie JM, Della Valle E, Weiland JD, Chestek CA, Chiel HJ. Carbon fiber electrodes for intracellular recording and stimulation. Journal of Neural Engineering. PMID 34826825 DOI: 10.1088/1741-2552/ac3dd7   
2021 Wen W, Turrigiano GG. Developmental Regulation of Homeostatic Plasticity in Mouse Primary Visual Cortex. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 41: 9891-9905. PMID 34686546 DOI: 10.1523/JNEUROSCI.1200-21.2021   
2021 Hockley A, Wu C, Shore SE. Olivocochlear projections contribute to superior intensity coding in cochlear nucleus small cells. The Journal of Physiology. PMID 34761815 DOI: 10.1113/JP282262   
2021 Jeong H, Deng J, Bonmassar G. Planar figure-8 coils for ultra-focal and directional micromagnetic brain stimulation. Journal of Vacuum Science and Technology. B, Nanotechnology & Microelectronics : Materials, Processing, Measurement, & Phenomena : Jvst B. 39: 063202. PMID 34692236 DOI: 10.1116/6.0001281   
2021 Zhang YF, Vargas Cifuentes L, Wright KN, Bhattarai JP, Mohrhardt J, Fleck D, Janke E, Jiang C, Cranfill SL, Goldstein N, Schreck M, Moberly AH, Yu Y, Arenkiel BR, Betley JN, et al. Ventral striatal islands of Calleja neurons control grooming in mice. Nature Neuroscience. PMID 34795450 DOI: 10.1038/s41593-021-00952-z   
2021 Qin BW, Zhao L, Lin W. A frequency-amplitude coordinator and its optimal energy consumption for biological oscillators. Nature Communications. 12: 5894. PMID 34625549 DOI: 10.1038/s41467-021-26182-2   
2021 Gal E, Amsalem O, Schindel A, London M, Schürmann F, Markram H, Segev I. The Role of Hub Neurons in Modulating Cortical Dynamics. Frontiers in Neural Circuits. 15: 718270. PMID 34630046 DOI: 10.3389/fncir.2021.718270   
2021 Chopek JW, Zhang Y, Brownstone RM. Intrinsic brainstem circuits comprised of Chx10-expressing neurons contribute to reticulospinal output in mice. Journal of Neurophysiology. PMID 34669520 DOI: 10.1152/jn.00322.2021   
2021 Oláh VJ, Tarcsay G, Brunner J. Small Size of Recorded Neuronal Structures Confines the Accuracy in Direct Axonal Voltage Measurements. Eneuro. 8. PMID 34257077 DOI: 10.1523/ENEURO.0059-21.2021   
2021 Cao J, Wang X, Powley TL, Liu Z. Gastric neurons in the nucleus tractus solitarius are selective to the orientation of gastric electrical stimulation. Journal of Neural Engineering. PMID 34634781 DOI: 10.1088/1741-2552/ac2ec6