| Year |
Citation |
Score |
| 2022 |
Rouhani FJ, Zou X, Danecek P, Badja C, Amarante TD, Koh G, Wu Q, Memari Y, Durbin R, Martincorena I, Bassett AR, Gaffney D, Nik-Zainal S. Substantial somatic genomic variation and selection for BCOR mutations in human induced pluripotent stem cells. Nature Genetics. PMID 35953586 DOI: 10.1038/s41588-022-01147-3 |
0.396 |
|
| 2021 |
Wei W, Gaffney DJ, Chinnery PF. Cell reprogramming shapes the mitochondrial DNA landscape. Nature Communications. 12: 5241. PMID 34475388 DOI: 10.1038/s41467-021-25482-x |
0.345 |
|
| 2018 |
Mosqueira D, Mannhardt I, Bhagwan JR, Lis-Slimak K, Katili P, Scott E, Hassan M, Prondzynski M, Harmer SC, Tinker A, Smith JGW, Carrier L, Williams PM, Gaffney D, Eschenhagen T, et al. CRISPR/Cas9 editing in human pluripotent stem cell-cardiomyocytes highlights arrhythmias, hypocontractility, and energy depletion as potential therapeutic targets for hypertrophic cardiomyopathy. European Heart Journal. PMID 29741611 DOI: 10.1093/Eurheartj/Ehy249 |
0.323 |
|
| 2012 |
Gaffney DJ, McVicker G, Pai AA, Fondufe-Mittendorf YN, Lewellen N, Michelini K, Widom J, Gilad Y, Pritchard JK. Controls of nucleosome positioning in the human genome. Plos Genetics. 8: e1003036. PMID 23166509 DOI: 10.1371/Journal.Pgen.1003036 |
0.317 |
|
| 2012 |
Liu JZ, Marri MA, Gaffney D, Mells GF, Jostins L, Cordell HJ, Ducker SJ, Day D, Heneghan MA, Neuberger J, Donaldson PT, Bathgate A, Burroughs AK, Davies MH, Jones DE, et al. Dense fine-mapping study identifies novel disease loci and implicates coding and non-coding variation in primary Mary cirrhosis risk Hepatology. 56. DOI: 10.1002/Hep.26040 |
0.323 |
|
| 2011 |
Pickrell JK, Gaffney DJ, Gilad Y, Pritchard JK. False positive peaks in ChIP-seq and other sequencing-based functional assays caused by unannotated high copy number regions. Bioinformatics (Oxford, England). 27: 2144-6. PMID 21690102 DOI: 10.1093/bioinformatics/btr354 |
0.316 |
|
| 2010 |
Revil T, Gaffney D, Dias C, Majewski J, Jerome-Majewska LA. Alternative splicing is frequent during early embryonic development in mouse. Bmc Genomics. 11: 399. PMID 20573213 DOI: 10.1186/1471-2164-11-399 |
0.325 |
|
| 2008 |
Gaffney DJ, Keightley PD. Effect of the assignment of ancestral CpG state on the estimation of nucleotide substitution rates in mammals. Bmc Evolutionary Biology. 8: 265. PMID 18826599 DOI: 10.1186/1471-2148-8-265 |
0.581 |
|
| 2008 |
Gaffney DJ, Blekhman R, Majewski J. Selective constraints in experimentally defined primate regulatory regions. Plos Genetics. 4: e1000157. PMID 18704158 DOI: 10.1371/Journal.Pgen.1000157 |
0.457 |
|
| 2006 |
Gaffney DJ, Keightley PD. Genomic selective constraints in murid noncoding DNA. Plos Genetics. 2: e204. PMID 17166057 DOI: 10.1371/journal.pgen.0020204 |
0.653 |
|
| 2005 |
Keightley PD, Kryukov GV, Sunyaev S, Halligan DL, Gaffney DJ. Evolutionary constraints in conserved nongenic sequences of mammals. Genome Research. 15: 1373-8. PMID 16204190 DOI: 10.1101/Gr.3942005 |
0.656 |
|
| 2005 |
Gaffney DJ, Keightley PD. The scale of mutational variation in the murid genome. Genome Research. 15: 1086-94. PMID 16024822 DOI: 10.1101/gr.3895005 |
0.613 |
|
| 2004 |
Wesche PL, Gaffney DJ, Keightley PD. DNA sequence error rates in Genbank records estimated using the mouse genome as a reference. Dna Sequence : the Journal of Dna Sequencing and Mapping. 15: 362-4. PMID 15621661 DOI: 10.1080/10425170400008972 |
0.595 |
|
| 2004 |
Gaffney DJ, Keightley PD. Unexpected conserved non-coding DNA blocks in mammals. Trends in Genetics : Tig. 20: 332-7. PMID 15262402 DOI: 10.1016/j.tig.2004.06.011 |
0.605 |
|
| 2003 |
Keightley PD, Gaffney DJ. Functional constraints and frequency of deleterious mutations in noncoding DNA of rodents. Proceedings of the National Academy of Sciences of the United States of America. 100: 13402-6. PMID 14597721 DOI: 10.1073/pnas.2233252100 |
0.663 |
|
| 2002 |
Eyre-Walker A, Keightley PD, Smith NG, Gaffney D. Quantifying the slightly deleterious mutation model of molecular evolution. Molecular Biology and Evolution. 19: 2142-9. PMID 12446806 DOI: 10.1093/Oxfordjournals.Molbev.A004039 |
0.615 |
|
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