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Ruben Portugues - Publications

Affiliations: 
2014-2021 Research Group of Sensorimotor Control MPI for Neurobiology Martinsried 
 2020- Institute of Neuroscience Technical University of Munich (TUM), München, Bayern, Germany 
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46 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2024 Palieri V, Paoli E, Wu YK, Haesemeyer M, Grunwald Kadow IC, Portugues R. The preoptic area and dorsal habenula jointly support homeostatic navigation in larval zebrafish. Current Biology : Cb. PMID 38211586 DOI: 10.1016/j.cub.2023.12.030  0.328
2024 Félix R, Markov DA, Renninger SL, Tomás AR, Laborde A, Carey MR, Orger MB, Portugues R. Structural and functional organization of visual responses in the inferior olive of larval zebrafish. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. PMID 38195508 DOI: 10.1523/JNEUROSCI.2352-21.2023  0.756
2023 Feierstein CE, de Goeij MHM, Ostrovsky AD, Laborde A, Portugues R, Orger MB, Machens CK. Dimensionality reduction reveals separate translation and rotation populations in the zebrafish hindbrain. Current Biology : Cb. 33: 3911-3925.e6. PMID 37689065 DOI: 10.1016/j.cub.2023.08.037  0.747
2022 Xiao Y, Petrucco L, Hoodless LJ, Portugues R, Czopka T. Oligodendrocyte precursor cells sculpt the visual system by regulating axonal remodeling. Nature Neuroscience. PMID 35241802 DOI: 10.1038/s41593-022-01023-7  0.758
2021 Odstrcil I, Petkova MD, Haesemeyer M, Boulanger-Weill J, Nikitchenko M, Gagnon JA, Oteiza P, Schalek R, Peleg A, Portugues R, Lichtman JW, Engert F. Functional and ultrastructural analysis of reafferent mechanosensation in larval zebrafish. Current Biology : Cb. PMID 34822765 DOI: 10.1016/j.cub.2021.11.007  0.801
2021 Markov DA, Petrucco L, Kist AM, Portugues R. A cerebellar internal model calibrates a feedback controller involved in sensorimotor control. Nature Communications. 12: 6694. PMID 34795244 DOI: 10.1038/s41467-021-26988-0  0.772
2021 Engerer P, Petridou E, Williams PR, Suzuki SC, Yoshimatsu T, Portugues R, Misgeld T, Godinho L. Notch-mediated re-specification of neuronal identity during central nervous system development. Current Biology : Cb. PMID 34534440 DOI: 10.1016/j.cub.2021.08.049  0.38
2021 Claudi F, Tyson AL, Petrucco L, Margrie TW, Portugues R, Branco T. Visualizing anatomically registered data with Brainrender. Elife. 10. PMID 33739286 DOI: 10.7554/eLife.65751  0.783
2021 Valera G, Markov DA, Bijari K, Randlett O, Asgharsharghi A, Baudoin JP, Ascoli GA, Portugues R, López-Schier H. A neuronal blueprint for directional mechanosensation in larval zebrafish. Current Biology : Cb. PMID 33545047 DOI: 10.1016/j.cub.2021.01.045  0.786
2021 Jafari M, Schumacher AM, Snaidero N, Ullrich Gavilanes EM, Neziraj T, Kocsis-Jutka V, Engels D, Jürgens T, Wagner I, Weidinger JDF, Schmidt SS, Beltrán E, Hagan N, Woodworth L, Ofengeim D, ... ... Portugues R, et al. Phagocyte-mediated synapse removal in cortical neuroinflammation is promoted by local calcium accumulation. Nature Neuroscience. PMID 33495636 DOI: 10.1038/s41593-020-00780-7  0.311
2020 Yildizoglu T, Riegler C, Fitzgerald JE, Portugues R. A Neural Representation of Naturalistic Motion-Guided Behavior in the Zebrafish Brain. Current Biology : Cb. PMID 32386533 DOI: 10.1016/J.Cub.2020.04.043  0.555
2020 Siju KP, Štih V, Aimon S, Gjorgjieva J, Portugues R, Grunwald Kadow IC. Valence and State-Dependent Population Coding in Dopaminergic Neurons in the Fly Mushroom Body. Current Biology : Cb. PMID 32386530 DOI: 10.1016/J.Cub.2020.04.037  0.799
2020 Barykina NV, Sotskov VP, Gruzdeva AM, Wu YK, Portugues R, Subach OM, Chefanova ES, Plusnin VV, Ivashkina OI, Anokhin KV, Vlaskina AV, Korzhenevskiy DA, Nikolaeva AY, Boyko KM, Rakitina TV, et al. FGCaMP7, an Improved Version of Fungi-Based Ratiometric Calcium Indicator for In Vivo Visualization of Neuronal Activity. International Journal of Molecular Sciences. 21. PMID 32344594 DOI: 10.3390/Ijms21083012  0.495
2019 Dragomir EI, Štih V, Portugues R. Evidence accumulation during a sensorimotor decision task revealed by whole-brain imaging. Nature Neuroscience. PMID 31792463 DOI: 10.1038/S41593-019-0535-8  0.778
2019 Kist AM, Portugues R. Optomotor Swimming in Larval Zebrafish Is Driven by Global Whole-Field Visual Motion and Local Light-Dark Transitions. Cell Reports. 29: 659-670.e3. PMID 31618634 DOI: 10.1016/J.Celrep.2019.09.024  0.783
2019 Štih V, Petrucco L, Kist AM, Portugues R. Stytra: An open-source, integrated system for stimulation, tracking and closed-loop behavioral experiments. Plos Computational Biology. 15: e1006699. PMID 30958870 DOI: 10.1371/Journal.Pcbi.1006699  0.757
2019 Knogler LD, Kist AM, Portugues R. Motor context dominates output from purkinje cell functional regions during reflexive visuomotor behaviours. Elife. 8. PMID 30681408 DOI: 10.7554/Elife.42138  0.802
2018 Fabritius A, Ng D, Kist AM, Erdogan M, Portugues R, Griesbeck O. Imaging-Based Screening Platform Assists Protein Engineering. Cell Chemical Biology. PMID 30220597 DOI: 10.1016/J.Chembiol.2018.08.008  0.739
2018 Knogler LD, Kist AM, Portugues R. Author response: Motor context dominates output from purkinje cell functional regions during reflexive visuomotor behaviours Elife. DOI: 10.7554/Elife.42138.025  0.428
2017 Oteiza P, Odstrcil I, Lauder G, Portugues R, Engert F. Erratum: A novel mechanism for mechanosensory-based rheotaxis in larval zebrafish. Nature. 549: 292. PMID 28905914 DOI: 10.1038/nature23895  0.588
2017 Oteiza P, Odstrcil I, Lauder G, Portugues R, Engert F. A novel mechanism for mechanosensory-based rheotaxis in larval zebrafish. Nature. 547: 445-448. PMID 28700578 DOI: 10.1038/Nature23014  0.651
2017 Hildebrand DGC, Cicconet M, Torres RM, Choi W, Quan TM, Moon J, Wetzel AW, Scott Champion A, Graham BJ, Randlett O, Plummer GS, Portugues R, Bianco IH, Saalfeld S, Baden AD, et al. Whole-brain serial-section electron microscopy in larval zebrafish. Nature. PMID 28489821 DOI: 10.1038/Nature22356  0.789
2017 Knogler LD, Markov DA, Dragomir EI, Štih V, Portugues R. Sensorimotor Representations in Cerebellar Granule Cells in Larval Zebrafish Are Dense, Spatially Organized, and Non-temporally Patterned. Current Biology : Cb. PMID 28434864 DOI: 10.1016/J.Cub.2017.03.029  0.75
2016 Lopes SS, Distel M, Linker C, Fior R, Monteiro R, Bianco IH, Portugues R, Strähle U, Saúde L. Report of the 4th European Zebrafish Principal Investigator Meeting. Zebrafish. PMID 27626600 DOI: 10.1089/Zeb.2016.1364  0.685
2016 Orger MB, Portugues R. Correlating Whole Brain Neural Activity with Behavior in Head-Fixed Larval Zebrafish. Methods in Molecular Biology (Clifton, N.J.). 1451: 307-20. PMID 27464817 DOI: 10.1007/978-1-4939-3771-4_21  0.782
2015 Randlett O, Wee CL, Naumann EA, Nnaemeka O, Schoppik D, Fitzgerald JE, Portugues R, Lacoste AM, Riegler C, Engert F, Schier AF. Whole-brain activity mapping onto a zebrafish brain atlas. Nature Methods. 12: 1039-1046. PMID 26778924 DOI: 10.1038/Nmeth.3581  0.763
2015 Lacoste AM, Schoppik D, Robson DN, Haesemeyer M, Portugues R, Li JM, Randlett O, Wee CL, Engert F, Schier AF. A convergent and essential interneuron pathway for mauthner-cell-mediated escapes. Current Biology : Cb. 25: 1526-34. PMID 25959971 DOI: 10.1016/J.Cub.2015.04.025  0.759
2015 Portugues R, Haesemeyer M, Blum ML, Engert F. Whole-field visual motion drives swimming in larval zebrafish via a stochastic process. The Journal of Experimental Biology. 218: 1433-43. PMID 25792753 DOI: 10.1242/Jeb.118299  0.694
2015 Feierstein CE, Portugues R, Orger MB. Seeing the whole picture: A comprehensive imaging approach to functional mapping of circuits in behaving zebrafish. Neuroscience. 296: 26-38. PMID 25433239 DOI: 10.1016/J.Neuroscience.2014.11.046  0.791
2014 Rose T, Goltstein PM, Portugues R, Griesbeck O. Putting a finishing touch on GECIs. Frontiers in Molecular Neuroscience. 7: 88. PMID 25477779 DOI: 10.3389/Fnmol.2014.00088  0.761
2014 Severi KE, Portugues R, Marques JC, O'Malley DM, Orger MB, Engert F. Neural control and modulation of swimming speed in the larval zebrafish. Neuron. 83: 692-707. PMID 25066084 DOI: 10.1016/J.Neuron.2014.06.032  0.79
2014 Portugues R, Feierstein CE, Engert F, Orger MB. Whole-brain activity maps reveal stereotyped, distributed networks for visuomotor behavior. Neuron. 81: 1328-43. PMID 24656252 DOI: 10.1016/J.Neuron.2014.01.019  0.83
2013 Portugues R, Severi KE, Wyart C, Ahrens MB. Optogenetics in a transparent animal: circuit function in the larval zebrafish. Current Opinion in Neurobiology. 23: 119-26. PMID 23246238 DOI: 10.1016/J.Conb.2012.11.001  0.799
2012 Akerboom J, Chen TW, Wardill TJ, Tian L, Marvin JS, Mutlu S, Calderón NC, Esposti F, Borghuis BG, Sun XR, Gordus A, Orger MB, Portugues R, Engert F, Macklin JJ, et al. Optimization of a GCaMP calcium indicator for neural activity imaging. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 32: 13819-40. PMID 23035093 DOI: 10.1523/Jneurosci.2601-12.2012  0.809
2012 Ahrens MB, Li JM, Orger MB, Robson DN, Schier AF, Engert F, Portugues R. Brain-wide neuronal dynamics during motor adaptation in zebrafish. Nature. 485: 471-7. PMID 22622571 DOI: 10.1038/Nature11057  0.803
2012 Valente A, Huang KH, Portugues R, Engert F. Ontogeny of classical and operant learning behaviors in zebrafish. Learning & Memory (Cold Spring Harbor, N.Y.). 19: 170-7. PMID 22434824 DOI: 10.1101/Lm.025668.112  0.708
2011 Portugues R, Engert F. Adaptive locomotor behavior in larval zebrafish. Frontiers in Systems Neuroscience. 5: 72. PMID 21909325 DOI: 10.3389/Fnsys.2011.00072  0.719
2009 Portugues R, Engert F. The neural basis of visual behaviors in the larval zebrafish. Current Opinion in Neurobiology. 19: 644-7. PMID 19896836 DOI: 10.1016/J.Conb.2009.10.007  0.713
2006 Bunster C, Portugues R, Cnockaert S, Henneaux M. Monopoles for gravitation and for higher spin fields Physical Review D. 73. DOI: 10.1103/Physrevd.73.105014  0.333
2006 Edelstein J, Portugues R. Gauge/string duality in confining theories Fortschritte Der Physik. 54: 525-579. DOI: 10.1002/Prop.200610301  0.322
2004 Hartnoll SA, Portugues R. Deforming baryons into confining strings Physical Review D - Particles, Fields, Gravitation and Cosmology. 70: 066007-1-066007-8. DOI: 10.1103/Physrevd.70.066007  0.318
2004 Gürsoy U, Hartnoll SA, Portugues R. The chiral anomaly from M theory Physical Review D. 69. DOI: 10.1103/Physrevd.69.086003  0.313
2004 Portugues R. Membrane solitons in eight-dimensional hyper-Kaehler backgrounds Journal of High Energy Physics. 2004: 051-051. DOI: 10.1088/1126-6708/2004/03/051  0.341
2002 Portugues R, Townsend PK. Sigma-model soliton intersections from exceptional calibrations Journal of High Energy Physics. 2002: 039-039. DOI: 10.1088/1126-6708/2002/04/039  0.514
2002 Portugues R, Townsend P. Intersoliton forces in the Wess–Zumino model Physics Letters B. 530: 227-234. DOI: 10.1016/S0370-2693(02)01323-0  0.522
2001 Gauntlett JP, Portugues R, Tong D, Townsend PK. D-brane solitons in supersymmetric sigma models Physical Review D. 63. DOI: 10.1103/Physrevd.63.085002  0.515
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