Tsvi Tlusty - Publications

Affiliations: 
2000-2004 Center for Physics and Biology Rockefeller University, New York, NY, United States 
 2005-2013 Physics Weizmann Institute of Science, Rehovot, Israel 
 2011-2015 School of Natural Science Institute for Advanced Studies 
 2015- CSLM Institute for Basic Science 
Area:
Physical Biology; Information Theory; Condensed Matter
Website:
http://www.sns.ias.edu/~tlusty/

30 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Piñeros WD, Tlusty T. Kinetic proofreading and the limits of thermodynamic uncertainty. Physical Review. E. 101: 022415. PMID 32168722 DOI: 10.1103/Physreve.101.022415  0.315
2018 Dutta S, Eckmann JP, Libchaber A, Tlusty T. Green function of correlated genes in a minimal mechanical model of protein evolution. Proceedings of the National Academy of Sciences of the United States of America. PMID 29712824 DOI: 10.1073/Pnas.1716215115  0.556
2017 Tlusty T, Libchaber A, Eckmann J. Physical Model of the Genotype-to-Phenotype Map of Proteins Physical Review X. 7. DOI: 10.1103/Physrevx.7.021037  0.547
2016 Savir Y, Tlusty T. Comment on "Ribosome utilizes the minimum free energy changes to achieve the highest decoding rate and fidelity". Physical Review. E. 93: 056401. PMID 27301009 DOI: 10.1103/Physreve.93.056401  0.676
2016 Tlusty T. Self-referring DNA and protein: a remark on physical and geometrical aspects. Philosophical Transactions. Series a, Mathematical, Physical, and Engineering Sciences. 374. PMID 26857671 DOI: 10.1098/Rsta.2015.0070  0.314
2015 Savir Y, Kagan J, Tlusty T. Binding of Transcription Factors Adapts to Resolve Information-Energy Tradeoff Journal of Statistical Physics. DOI: 10.1007/S10955-015-1388-5  0.693
2014 Joseph C, Tseng CY, Zocchi G, Tlusty T. Asymmetric effect of mechanical stress on the forward and reverse reaction catalyzed by an enzyme. Plos One. 9: e101442. PMID 25000118 DOI: 10.1371/Journal.Pone.0101442  0.546
2013 Savir Y, Tlusty T. The ribosome as an optimal decoder: a lesson in molecular recognition. Cell. 153: 471-9. PMID 23582332 DOI: 10.1016/J.Cell.2013.03.032  0.702
2012 Maeda YT, Tlusty T, Libchaber A. Effects of long DNA folding and small RNA stem-loop in thermophoresis. Proceedings of the National Academy of Sciences of the United States of America. 109: 17972-7. PMID 23071341 DOI: 10.1073/Pnas.1215764109  0.534
2012 Iyer KV, Maharana S, Gupta S, Libchaber A, Tlusty T, Shivashankar GV. Modeling and experimental methods to probe the link between global transcription and spatial organization of chromosomes. Plos One. 7: e46628. PMID 23049710 DOI: 10.1371/Journal.Pone.0046628  0.522
2012 Savir Y, Waysbort N, Antebi YE, Tlusty T, Friedman N. Balancing speed and accuracy of polyclonal T cell activation: a role for extracellular feedback. Bmc Systems Biology. 6: 111. PMID 22925037 DOI: 10.1186/1752-0509-6-111  0.688
2010 Savir Y, Tlusty T. RecA-mediated homology search as a nearly optimal signal detection system. Molecular Cell. 40: 388-96. PMID 21070965 DOI: 10.1016/J.Molcel.2010.10.020  0.703
2010 Savir Y, Noor E, Milo R, Tlusty T. Cross-species analysis traces adaptation of Rubisco toward optimality in a low-dimensional landscape. Proceedings of the National Academy of Sciences of the United States of America. 107: 3475-80. PMID 20142476 DOI: 10.1073/Pnas.0911663107  0.696
2009 Waysbort N, Savir Y, Antebi Y, Tlusty T, Friedman N. Modeling autoregulation by IL-2 in T-cell activation: A time to cooperate, a time to compete Cytokine. 48: 103. DOI: 10.1016/J.Cyto.2009.07.432  0.673
2008 Savir Y, Tlusty T. Optimal Design of a Molecular Recognizer: Molecular Recognition as a Bayesian Signal Detection Problem Ieee Journal of Selected Topics in Signal Processing. 2: 390-399. DOI: 10.1109/Jstsp.2008.923859  0.709
2007 Savir Y, Tlusty T. Conformational proofreading: the impact of conformational changes on the specificity of molecular recognition. Plos One. 2: e468. PMID 17520027 DOI: 10.1371/Journal.Pone.0000468  0.694
2006 Sagi D, Tlusty T, Stavans J. High fidelity of RecA-catalyzed recombination: a watchdog of genetic diversity. Nucleic Acids Research. 34: 5021-31. PMID 16990254 DOI: 10.1093/Nar/Gkl586  0.631
2005 Safran S, Gov N, Nicolas A, Schwarz U, Tlusty T. Physics of cell elasticity, shape and adhesion Physica a: Statistical Mechanics and Its Applications. 352: 171-201. DOI: 10.1016/J.Physa.2004.12.035  0.566
2004 Tlusty T, Bar-Ziv R, Libchaber A. High-fidelity DNA sensing by protein binding fluctuations. Physical Review Letters. 93: 258103. PMID 15697950 DOI: 10.1103/Physrevlett.93.258103  0.562
2003 Zilman A, Tlusty T, Safran SA. Entropic networks in colloidal, polymeric and amphiphilic systems Journal of Physics Condensed Matter. 15: S57-S64. DOI: 10.1088/0953-8984/15/1/306  0.696
2002 Bar-Ziv R, Tlusty T, Libchaber A. Protein-DNA computation by stochastic assembly cascade. Proceedings of the National Academy of Sciences of the United States of America. 99: 11589-92. PMID 12186973 DOI: 10.1073/Pnas.162369099  0.544
2001 Tlusty T, Safran SA. Entropic networks in colloidal self-assembly Philosophical Transactions of the Royal Society a: Mathematical, Physical and Engineering Sciences. 359: 879-881. DOI: 10.1098/Rsta.2001.0807  0.524
2000 Tlusty T, Safran SA. Defect-induced phase separation in dipolar fluids Science. 290: 1328-1331. PMID 11082055 DOI: 10.1126/Science.290.5495.1328  0.52
2000 Tlusty T, Safran SA. Microemulsion networks: the onset of bicontinuity Journal of Physics: Condensed Matter. 12: A253-A262. DOI: 10.1088/0953-8984/12/8A/332  0.543
1999 Bar-Ziv R, Tlusty T, Moses E, Safran SA, Bershadsky A. Pearling in cells: a clue to understanding cell shape. Proceedings of the National Academy of Sciences of the United States of America. 96: 10140-5. PMID 10468576 DOI: 10.1073/Pnas.96.18.10140  0.525
1999 Bernheim-Groswasser A, Tlusty T, Safran SA, Talmon Y. Direct observation of phase separation in microemulsion networks Langmuir. 15: 5448-5453. DOI: 10.1021/La990301Q  0.528
1998 Meller A, Bar-Ziv R, Tlusty T, Moses E, Stavans J, Safran SA. Localized dynamic light scattering: a new approach to dynamic measurements in optical microscopy. Biophysical Journal. 74: 1541-8. PMID 9512050 DOI: 10.1016/S0006-3495(98)77866-X  0.673
1997 Tlusty T, Safran SA, Menes R, Strey R. Scaling Laws for Microemulsions Governed by Spontaneous Curvature Physical Review Letters. 78: 2616-2619. DOI: 10.1103/Physrevlett.78.2616  0.537
1997 Bar-Ziv R, Meller A, Tlusty T, Moses E, Stavans J, Safran SA. Localized Dynamic Light Scattering: Probing Single Particle Dynamics at the Nanoscale Physical Review Letters. 78: 154-157. DOI: 10.1103/Physrevlett.78.154  0.672
1996 Safran SA, Tlusty T. Curvature Elasticity Models of Microemulsions Berichte Der Bunsengesellschaft FüR Physikalische Chemie. 100: 252-263. DOI: 10.1002/BBPC.19961000311  0.446
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