| Year |
Citation |
Score |
| 2023 |
Bondra ER, Rine J. Context-dependent function of the transcriptional regulator Rap1 in gene silencing and activation in . Proceedings of the National Academy of Sciences of the United States of America. 120: e2304343120. PMID 37769255 DOI: 10.1073/pnas.2304343120 |
0.38 |
|
| 2023 |
Movilla Miangolarra A, Saxton DS, Yan Z, Rine J, Howard M. Two-way feedback between chromatin compaction and histone modification state explains heterochromatin bistability. Biorxiv : the Preprint Server For Biology. PMID 37645983 DOI: 10.1101/2023.08.12.552948 |
0.345 |
|
| 2023 |
Bondra ER, Rine J. Context dependent function of the transcriptional regulator Rap1 in gene silencing and activation in . Biorxiv : the Preprint Server For Biology. PMID 37214837 DOI: 10.1101/2023.05.08.539937 |
0.379 |
|
| 2022 |
Fouet M, Rine J. Limits to Transcriptional Silencing in Saccharomyces cerevisiae. Genetics. PMID 36495285 DOI: 10.1093/genetics/iyac180 |
0.8 |
|
| 2022 |
Brothers M, Rine J. Distinguishing between recruitment and spread of silent chromatin structures in . Elife. 11. PMID 35073254 DOI: 10.7554/eLife.75653 |
0.805 |
|
| 2021 |
Farris D, Saxton DS, Rine J. A novel allele of SIR2 reveals a heritable intermediate state of gene silencing. Genetics. 218. PMID 33713126 DOI: 10.1093/genetics/iyab041 |
0.377 |
|
| 2020 |
Goodnight D, Rine J. S-phase-independent silencing establishment in Saccharomyces cerevisiae. Elife. 9. PMID 32687055 DOI: 10.7554/Elife.58910 |
0.444 |
|
| 2019 |
Saxton DS, Rine J. Epigenetic memory independent of symmetric histone inheritance. Elife. 8. PMID 31613222 DOI: 10.7554/Elife.51421 |
0.443 |
|
| 2019 |
Schlissel G, Rine J. The nucleosome core particle remembers its position through DNA replication and RNA transcription. Proceedings of the National Academy of Sciences of the United States of America. 116: 20605-20611. PMID 31511420 DOI: 10.1073/Pnas.1911943116 |
0.433 |
|
| 2019 |
Rine J. Mutations in the PCNA DNA Polymerase Clamp of Saccharomyces cerevisiae Reveal Complexities of the Cell Cycle and Ploidy on Heterochromatin Assembly. Genetics. 213: 449-463. PMID 31451562 DOI: 10.1534/Genetics.119.302452 |
0.491 |
|
| 2019 |
Marini NJ, Asrani K, Yang W, Rine J, Shaw GM. Accumulation of rare coding variants in genes implicated in risk of human cleft lip with or without cleft palate. American Journal of Medical Genetics. Part A. PMID 31063268 DOI: 10.1002/Ajmg.A.61183 |
0.333 |
|
| 2019 |
Gonseth S, Shaw GM, Roy R, Segal MR, Asrani K, Rine J, Wiemels J, Marini NJ. Epigenomic profiling of newborns with isolated orofacial clefts reveals widespread DNA methylation changes and implicates metastable epiallele regions in disease risk. Epigenetics. 1-16. PMID 30870065 DOI: 10.1080/15592294.2019.1581591 |
0.332 |
|
| 2019 |
Saxton DS, Rine J. Author response: Epigenetic memory independent of symmetric histone inheritance Elife. DOI: 10.7554/Elife.51421.030 |
0.304 |
|
| 2018 |
Janke R, King GA, Kupiec M, Rine J. Pivotal roles of PCNA loading and unloading in heterochromatin function. Proceedings of the National Academy of Sciences of the United States of America. PMID 29440488 DOI: 10.1073/Pnas.1721573115 |
0.431 |
|
| 2018 |
Sieverman KJ, Rine J. Impact of Homologous Recombination on Silent Chromatin in . Genetics. 208: 1099-1113. PMID 29339409 DOI: 10.1534/Genetics.118.300704 |
0.488 |
|
| 2017 |
Janke R, Iavarone AT, Rine J. Oncometabolite D-2-Hydroxyglutarate enhances gene silencing through inhibition of specific H3K36 histone demethylases. Elife. 6. PMID 28346139 DOI: 10.7554/Elife.22451 |
0.41 |
|
| 2017 |
Schlissel G, Krzyzanowski MK, Caudron F, Barral Y, Rine J. Aggregation of the Whi3 protein, not loss of heterochromatin, causes sterility in old yeast cells. Science (New York, N.Y.). 355: 1184-1187. PMID 28302853 DOI: 10.1126/Science.Aaj2103 |
0.343 |
|
| 2017 |
Janke R, Iavarone AT, Rine J. Author response: Oncometabolite D-2-Hydroxyglutarate enhances gene silencing through inhibition of specific H3K36 histone demethylases Elife. DOI: 10.7554/Elife.22451.017 |
0.376 |
|
| 2016 |
Dodson AE, Rine J. Donor Preference Meets Heterochromatin: Moonlighting Activities of a Recombinational Enhancer in Saccharomyces cerevisiae. Genetics. 204: 1065-1074. PMID 27655944 DOI: 10.1534/Genetics.116.194696 |
0.442 |
|
| 2016 |
Thurtle-Schmidt DM, Dodson AE, Rine J. Histone Deacetylases with Antagonistic Roles in Saccharomyces cerevisiae Heterochromatin Formation. Genetics. 204: 177-90. PMID 27489001 DOI: 10.1534/Genetics.116.190835 |
0.465 |
|
| 2016 |
McCleary DF, Steakley DL, Rine J. Sir Protein-Independent Repair of Dicentric Chromosomes in Saccharomyces cerevisiae. Molecular Biology of the Cell. PMID 27466318 DOI: 10.1091/Mbc.E16-02-0102 |
0.776 |
|
| 2016 |
Liu TY, Dodson AE, Terhorst J, Song YS, Rine J. Riches of phenotype computationally extracted from microbial colonies. Proceedings of the National Academy of Sciences of the United States of America. PMID 27140647 DOI: 10.1073/Pnas.1523295113 |
0.333 |
|
| 2016 |
Ellahi A, Rine J. Evolution and Functional Trajectory of Sir1 in Gene Silencing. Molecular and Cellular Biology. 36: 1164-79. PMID 26811328 DOI: 10.1128/Mcb.01013-15 |
0.463 |
|
| 2015 |
Janke R, Dodson AE, Rine J. Metabolism and epigenetics. Annual Review of Cell and Developmental Biology. 31: 473-496. PMID 26359776 DOI: 10.1146/Annurev-Cellbio-100814-125544 |
0.415 |
|
| 2015 |
Steakley DL, Rine J. On the Mechanism of Gene Silencing in Saccharomyces cerevisiae. G3 (Bethesda, Md.). 5: 1751-63. PMID 26082137 DOI: 10.1534/G3.115.018515 |
0.809 |
|
| 2015 |
Ellahi A, Thurtle DM, Rine J. The Chromatin and Transcriptional Landscape of Native Saccharomyces cerevisiae Telomeres and Subtelomeric Domains. Genetics. 200: 505-21. PMID 25823445 DOI: 10.1534/Genetics.115.175711 |
0.815 |
|
| 2015 |
Dodson AE, Rine J. Heritable capture of heterochromatin dynamics in Saccharomyces cerevisiae. Elife. 4: e05007. PMID 25581000 DOI: 10.7554/Elife.05007 |
0.459 |
|
| 2015 |
Lombardi LM, Davis MD, Rine J. Maintenance of nucleosomal balance in cis by conserved AAA-ATPase Yta7. Genetics. 199: 105-16. PMID 25406467 DOI: 10.1534/Genetics.114.168039 |
0.769 |
|
| 2015 |
Dodson AE, Rine J. Heritable capture of heterochromatin dynamic saccharomyces cerevisiae Elife. 2015. DOI: 10.7554/eLife.05007 |
0.345 |
|
| 2014 |
Sadhu MJ, Moresco JJ, Zimmer AD, Yates JR, Rine J. Multiple inputs control sulfur-containing amino acid synthesis in Saccharomyces cerevisiae. Molecular Biology of the Cell. 25: 1653-65. PMID 24648496 DOI: 10.1091/Mbc.E13-12-0755 |
0.787 |
|
| 2014 |
Thurtle DM, Rine J. The molecular topography of silenced chromatin in Saccharomyces cerevisiae. Genes & Development. 28: 245-58. PMID 24493645 DOI: 10.1101/Gad.230532.113 |
0.813 |
|
| 2013 |
Teytelman L, Thurtle DM, Rine J, van Oudenaarden A. Highly expressed loci are vulnerable to misleading ChIP localization of multiple unrelated proteins. Proceedings of the National Academy of Sciences of the United States of America. 110: 18602-7. PMID 24173036 DOI: 10.1073/Pnas.1316064110 |
0.804 |
|
| 2013 |
Sadhu MJ, Guan Q, Li F, Sales-Lee J, Iavarone AT, Hammond MC, Cande WZ, Rine J. Nutritional control of epigenetic processes in yeast and human cells. Genetics. 195: 831-44. PMID 23979574 DOI: 10.1534/Genetics.113.153981 |
0.788 |
|
| 2013 |
Dimster-Denk D, Tripp KW, Marini NJ, Marqusee S, Rine J. Mono and dual cofactor dependence of human cystathionine β-synthase enzyme variants in vivo and in vitro. G3 (Bethesda, Md.). 3: 1619-28. PMID 23934999 DOI: 10.1534/G3.113.006916 |
0.31 |
|
| 2012 |
Teytelman L, Osborne Nishimura EA, Özaydin B, Eisen MB, Rine J. The enigmatic conservation of a Rap1 binding site in the Saccharomyces cerevisiae HMR-E silencer. G3 (Bethesda, Md.). 2: 1555-62. PMID 23275878 DOI: 10.1534/G3.112.004077 |
0.311 |
|
| 2012 |
Zill OA, Scannell DR, Kuei J, Sadhu M, Rine J. Evolutionary analysis of heterochromatin protein compatibility by interspecies complementation in Saccharomyces. Genetics. 192: 1001-14. PMID 22923378 DOI: 10.1534/Genetics.112.141549 |
0.799 |
|
| 2012 |
Zunder RM, Rine J. Direct interplay among histones, histone chaperones, and a chromatin boundary protein in the control of histone gene expression. Molecular and Cellular Biology. 32: 4337-49. PMID 22907759 DOI: 10.1128/Mcb.00871-12 |
0.484 |
|
| 2012 |
Zunder RM, Antczak AJ, Berger JM, Rine J. Two surfaces on the histone chaperone Rtt106 mediate histone binding, replication, and silencing. Proceedings of the National Academy of Sciences of the United States of America. 109: E144-53. PMID 22198837 DOI: 10.1073/Pnas.1119095109 |
0.414 |
|
| 2011 |
Scannell DR, Zill OA, Rokas A, Payen C, Dunham MJ, Eisen MB, Rine J, Johnston M, Hittinger CT. The Awesome Power of Yeast Evolutionary Genetics: New Genome Sequences and Strain Resources for the Saccharomyces sensu stricto Genus. G3 (Bethesda, Md.). 1: 11-25. PMID 22384314 DOI: 10.1534/G3.111.000273 |
0.721 |
|
| 2011 |
Marini NJ, Hoffmann TJ, Lammer EJ, Hardin J, Lazaruk K, Stein JB, Gilbert DA, Wright C, Lipzen A, Pennacchio LA, Carmichael SL, Witte JS, Shaw GM, Rine J. A genetic signature of spina bifida risk from pathway-informed comprehensive gene-variant analysis. Plos One. 6: e28408. PMID 22140583 DOI: 10.1371/Journal.Pone.0028408 |
0.309 |
|
| 2011 |
Lombardi LM, Ellahi A, Rine J. Direct regulation of nucleosome density by the conserved AAA-ATPase Yta7. Proceedings of the National Academy of Sciences of the United States of America. 108: E1302-11. PMID 22074782 DOI: 10.1073/Pnas.1116819108 |
0.758 |
|
| 2011 |
Osborne EA, Hiraoka Y, Rine J. Symmetry, asymmetry, and kinetics of silencing establishment in Saccharomyces cerevisiae revealed by single-cell optical assays. Proceedings of the National Academy of Sciences of the United States of America. 108: 1209-16. PMID 21262833 DOI: 10.1073/Pnas.1018742108 |
0.785 |
|
| 2010 |
Zill OA, Scannell D, Teytelman L, Rine J. Co-evolution of transcriptional silencing proteins and the DNA elements specifying their assembly. Plos Biology. 8: e1000550. PMID 21151344 DOI: 10.1371/Journal.Pbio.1000550 |
0.762 |
|
| 2010 |
Mayfield JA, Fontana MF, Rine J. Genetic control of immune cell types in fungal disease. Proceedings of the National Academy of Sciences of the United States of America. 107: 22202-6. PMID 21135228 DOI: 10.1073/Pnas.1012925108 |
0.305 |
|
| 2010 |
Halley JE, Kaplan T, Wang AY, Kobor MS, Rine J. Roles for H2A.Z and its acetylation in GAL1 transcription and gene induction, but not GAL1-transcriptional memory. Plos Biology. 8: e1000401. PMID 20582323 DOI: 10.1371/Journal.Pbio.1000401 |
0.809 |
|
| 2010 |
Marini NJ, Thomas PD, Rine J. The use of orthologous sequences to predict the impact of amino acid substitutions on protein function. Plos Genetics. 6: e1000968. PMID 20523748 DOI: 10.1371/Journal.Pgen.1000968 |
0.337 |
|
| 2010 |
Rusche LN, Rine J. Switching the mechanism of mating type switching: a domesticated transposase supplants a domesticated homing endonuclease. Genes & Development. 24: 10-4. PMID 20047997 DOI: 10.1101/Gad.1886310 |
0.345 |
|
| 2010 |
Ozaydin B, Rine J. Expanded roles of the origin recognition complex in the architecture and function of silenced chromatin in Saccharomyces cerevisiae. Molecular and Cellular Biology. 30: 626-39. PMID 19948882 DOI: 10.1128/Mcb.00614-09 |
0.822 |
|
| 2010 |
Rine J, Kenyon C. A Well-Studied Worm: The Nematode Caenorhabditis elegans. Science (New York, N.Y.). 244: 235. PMID 17835358 DOI: 10.1126/Science.244.4901.235 |
0.46 |
|
| 2009 |
Wang AY, Schulze JM, Skordalakes E, Gin JW, Berger JM, Rine J, Kobor MS. Asf1-like structure of the conserved Yaf9 YEATS domain and role in H2A.Z deposition and acetylation. Proceedings of the National Academy of Sciences of the United States of America. 106: 21573-8. PMID 19966225 DOI: 10.1073/Pnas.0906539106 |
0.61 |
|
| 2009 |
Teytelman L, Ozaydin B, Zill O, Lefrançois P, Snyder M, Rine J, Eisen MB. Impact of chromatin structures on DNA processing for genomic analyses. Plos One. 4: e6700. PMID 19693276 DOI: 10.1371/Journal.Pone.0006700 |
0.8 |
|
| 2009 |
Osborne EA, Dudoit S, Rine J. The establishment of gene silencing at single-cell resolution. Nature Genetics. 41: 800-6. PMID 19543267 DOI: 10.1038/Ng.402 |
0.784 |
|
| 2009 |
Gallagher JE, Babiarz JE, Teytelman L, Wolfe KH, Rine J. Elaboration, diversification and regulation of the Sir1 family of silencing proteins in Saccharomyces. Genetics. 181: 1477-91. PMID 19171939 DOI: 10.1534/Genetics.108.099663 |
0.741 |
|
| 2008 |
Teytelman L, Eisen MB, Rine J. Silent but not static: accelerated base-pair substitution in silenced chromatin of budding yeasts. Plos Genetics. 4: e1000247. PMID 18989454 DOI: 10.1371/Journal.Pgen.1000247 |
0.381 |
|
| 2008 |
Chao LY, Rine J, Marletta MA. Spectroscopic and kinetic studies of Nor1, a cytochrome P450 nitric oxide reductase from the fungal pathogen Histoplasma capsulatum. Archives of Biochemistry and Biophysics. 480: 132-7. PMID 18804446 DOI: 10.1016/J.Abb.2008.09.001 |
0.616 |
|
| 2008 |
Zill OA, Rine J. Interspecies variation reveals a conserved repressor of alpha-specific genes in Saccharomyces yeasts. Genes & Development. 22: 1704-16. PMID 18559484 DOI: 10.1101/Gad.1640008 |
0.743 |
|
| 2008 |
Chao LY, Marletta MA, Rine J. Sre1, an iron-modulated GATA DNA-binding protein of iron-uptake genes in the fungal pathogen Histoplasma capsulatum. Biochemistry. 47: 7274-83. PMID 18549241 DOI: 10.1021/Bi800066S |
0.658 |
|
| 2008 |
Marini NJ, Gin J, Ziegle J, Keho KH, Ginzinger D, Gilbert DA, Rine J. The prevalence of folate-remedial MTHFR enzyme variants in humans Proceedings of the National Academy of Sciences of the United States of America. 105: 8055-8060. PMID 18523009 DOI: 10.1073/Pnas.0802813105 |
0.328 |
|
| 2008 |
Hwang LH, Mayfield JA, Rine J, Sil A. Histoplasma requires SID1, a member of an iron-regulated siderophore gene cluster, for host colonization. Plos Pathogens. 4: e1000044. PMID 18404210 DOI: 10.1371/Journal.Ppat.1000044 |
0.575 |
|
| 2007 |
Suter B, Pogoutse O, Guo X, Krogan N, Lewis P, Greenblatt JF, Rine J, Emili A. Association with the origin recognition complex suggests a novel role for histone acetyltransferase Hat1p/Hat2p. Bmc Biology. 5: 38. PMID 17880717 DOI: 10.1186/1741-7007-5-38 |
0.631 |
|
| 2007 |
Jeong H, Herskowitz I, Kroetz DL, Rine J. Function-altering SNPs in the human multidrug transporter gene ABCB1 identified using a Saccharomyces-based assay. Plos Genetics. 3: e39. PMID 17352537 DOI: 10.1371/Journal.Pgen.0030039 |
0.537 |
|
| 2006 |
Davies BS, Rine J. A role for sterol levels in oxygen sensing in Saccharomyces cerevisiae. Genetics. 174: 191-201. PMID 16783004 DOI: 10.1534/Genetics.106.059964 |
0.722 |
|
| 2006 |
Babiarz JE, Halley JE, Rine J. Telomeric heterochromatin boundaries require NuA4-dependent acetylation of histone variant H2A.Z in Saccharomyces cerevisiae. Genes & Development. 20: 700-10. PMID 16543222 DOI: 10.1101/Gad.1386306 |
0.789 |
|
| 2006 |
Kirchmaier AL, Rine J. Cell cycle requirements in assembling silent chromatin in Saccharomyces cerevisiae Molecular and Cellular Biology. 26: 852-862. PMID 16428441 DOI: 10.1128/Mcb.26.3.852-862.2006 |
0.402 |
|
| 2006 |
Roberts TM, Kobor MS, Bastin-Shanower SA, Ii M, Horte SA, Gin JW, Emili A, Rine J, Brill SJ, Brown GW. Slx4 regulates DNA damage checkpoint-dependent phosphorylation of the BRCT domain protein Rtt107/Esc4. Molecular Biology of the Cell. 17: 539-48. PMID 16267268 DOI: 10.1091/Mbc.E05-08-0785 |
0.553 |
|
| 2006 |
Rine JD. Sir1- and Sir2p-elated Genes Annual Review of Genetics. 42: 81013034826018. DOI: 10.1146/Annurev.Genet.41.110306.130335 |
0.344 |
|
| 2005 |
Olaharski AJ, Rine J, Marshall BL, Babiarz J, Zhang L, Verdin E, Smith MT. The flavoring agent dihydrocoumarin reverses epigenetic silencing and inhibits sirtuin deacetylases Plos Genetics. 1: e77. PMID 16362078 DOI: 10.1371/Journal.Pgen.0010077 |
0.694 |
|
| 2005 |
Pillus L, Rine J. SIR1 and the origin of epigenetic states in Saccharomyces cerevisiae. Cold Spring Harbor Symposia On Quantitative Biology. 69: 259-65. PMID 16117657 DOI: 10.1101/Sqb.2004.69.259 |
0.315 |
|
| 2005 |
Davies BS, Wang HS, Rine J. Dual activators of the sterol biosynthetic pathway of Saccharomyces cerevisiae: similar activation/regulatory domains but different response mechanisms. Molecular and Cellular Biology. 25: 7375-85. PMID 16055745 DOI: 10.1128/Mcb.25.16.7375-7385.2005 |
0.726 |
|
| 2005 |
Lynch PJ, Fraser HB, Sevastopoulos E, Rine J, Rusche LN. Sum1p, the origin recognition complex, and the spreading of a promoter-specific repressor in Saccharomyces cerevisiae. Molecular and Cellular Biology. 25: 5920-32. PMID 15988008 DOI: 10.1128/Mcb.25.14.5920-5932.2005 |
0.433 |
|
| 2004 |
Suter B, Tong A, Chang M, Yu L, Brown GW, Boone C, Rine J. The origin recognition complex links replication, sister chromatid cohesion and transcriptional silencing in Saccharomyces cerevisiae. Genetics. 167: 579-91. PMID 15238513 DOI: 10.1534/Genetics.103.024851 |
0.455 |
|
| 2004 |
Beh CT, Rine J. A role for yeast oxysterol-binding protein homologs in endocytosis and in the maintenance of intracellular sterol-lipid distribution. Journal of Cell Science. 117: 2983-96. PMID 15173322 DOI: 10.1242/Jcs.01157 |
0.379 |
|
| 2004 |
Kobor MS, Venkatasubrahmanyam S, Meneghini MD, Gin JW, Jennings JL, Link AJ, Madhani HD, Rine J. A protein complex containing the conserved Swi2/Snf2-related ATPase Swr1p deposits histone variant H2A.Z into euchromatin. Plos Biology. 2: E131. PMID 15045029 DOI: 10.1371/Journal.Pbio.0020131 |
0.621 |
|
| 2004 |
Tong AH, Lesage G, Bader GD, Ding H, Xu H, Xin X, Young J, Berriz GF, Brost RL, Chang M, Chen Y, Cheng X, Chua G, Friesen H, Goldberg DS, ... ... Rine J, et al. Global mapping of the yeast genetic interaction network. Science (New York, N.Y.). 303: 808-13. PMID 14764870 DOI: 10.1126/Science.1091317 |
0.738 |
|
| 2003 |
Hwang L, Hocking-Murray D, Bahrami AK, Andersson M, Rine J, Sil A. Identifying phase-specific genes in the fungal pathogen Histoplasma capsulatum using a genomic shotgun microarray. Molecular Biology of the Cell. 14: 2314-26. PMID 12808032 DOI: 10.1091/Mbc.E03-01-0027 |
0.58 |
|
| 2003 |
Rusche LN, Kirchmaier AL, Rine J. The establishment, inheritance, and function of silenced chromatin in Saccharomyces cerevisiae. Annual Review of Biochemistry. 72: 481-516. PMID 12676793 DOI: 10.1146/Annurev.Biochem.72.121801.161547 |
0.488 |
|
| 2003 |
Aström SU, Cline TW, Rine J. The Drosophila melanogaster sir2+ gene is nonessential and has only minor effects on position-effect variegation. Genetics. 163: 931-7. PMID 12663533 |
0.324 |
|
| 2002 |
Rusché LN, Kirchmaier AL, Rine J. Ordered nucleation and spreading of silenced chromatin in Saccharomyces cerevisiae. Molecular Biology of the Cell. 13: 2207-22. PMID 12134062 DOI: 10.1091/Mbc.E02-03-0175 |
0.483 |
|
| 2002 |
Garber PM, Rine J. Overlapping roles of the spindle assembly and DNA damage checkpoints in the cell-cycle response to altered chromosomes in Saccharomyces cerevisiae. Genetics. 161: 521-34. PMID 12072451 |
0.718 |
|
| 2001 |
Vik A, Rine J. Upc2p and Ecm22p, dual regulators of sterol biosynthesis in Saccharomyces cerevisiae. Molecular and Cellular Biology. 21: 6395-405. PMID 11533229 DOI: 10.1128/Mcb.21.19.6395-6405.2001 |
0.45 |
|
| 2001 |
Rusché LN, Rine J. Conversion of a gene-specific repressor to a regional silencer. Genes & Development. 15: 955-67. PMID 11316790 DOI: 10.1101/gad.873601 |
0.344 |
|
| 2001 |
Beh CT, Cool L, Phillips J, Rine J. Overlapping functions of the yeast oxysterol-binding protein homologues. Genetics. 157: 1117-40. PMID 11238399 |
0.345 |
|
| 2001 |
Kirchmaier AL, Rine J. DNA replication-independent silencing in S. cerevisiae Science. 291: 646-650. PMID 11158676 DOI: 10.1126/Science.291.5504.646 |
0.376 |
|
| 2000 |
Metallinos D, Rine J. Exclusion of EDNRB and KIT as the basis for white spotting in Border Collies Genome Biology. 1: 1-4. PMID 11178229 DOI: 10.1186/Gb-2000-1-2-Research0004 |
0.343 |
|
| 2000 |
Vik A, Rine J. Membrane biology: membrane-regulated transcription. Current Biology : Cb. 10: R869-71. PMID 11114535 DOI: 10.1016/S0960-9822(00)00822-8 |
0.572 |
|
| 1999 |
Ehrenhofer-Murray AE, Kamakaka RT, Rine J. A role for the replication proteins PCNA, RF-C, polymerase epsilon and Cdc45 in transcriptional silencing in Saccharomyces cerevisiae. Genetics. 153: 1171-82. PMID 10545450 |
0.349 |
|
| 1999 |
Rine J. On the mechanism of silencing in Escherichia coli. Proceedings of the National Academy of Sciences of the United States of America. 96: 8309-8311. PMID 10411864 DOI: 10.1073/Pnas.96.15.8309 |
0.389 |
|
| 1999 |
Acland GM, Ray K, Mellersh CS, Langston AA, Rine J, Ostrander EA, Aguirre GD. A novel retinal degeneration locus identified by linkage and comparative mapping of canine early retinal degeneration. Genomics. 59: 134-42. PMID 10409424 DOI: 10.1006/Geno.1999.5842 |
0.303 |
|
| 1999 |
Donze D, Adams CR, Rine J, Kamakaka RT. The boundaries of the silenced HMR domain in Saccharomyces cerevisiae Genes and Development. 13: 698-708. PMID 10090726 DOI: 10.1101/Gad.13.6.698 |
0.697 |
|
| 1999 |
Åström SU, Okamura SM, Rine J. Yeast cell-type regulation of DNA repair Nature. 397: 310-310. PMID 9950423 DOI: 10.1038/16833 |
0.419 |
|
| 1999 |
Gardner KA, Rine J, Fox CA. A region of the Sir1 protein dedicated to recognition of a silencer and required for interaction with the Orc1 protein in saccharomyces cerevisiae. Genetics. 151: 31-44. PMID 9872946 |
0.604 |
|
| 1998 |
Gardner R, Cronin S, Leader B, Rine J, Hampton R. Sequence Determinants for Regulated Degradation of Yeast 3-Hydroxy-3-Methylglutaryl-CoA Reductase, an Integral Endoplasmic Reticulum Membrane Protein Molecular Biology of the Cell. 9: 2611-2626. PMID 9725915 DOI: 10.1091/Mbc.9.9.2611 |
0.671 |
|
| 1998 |
Kamakaka RT, Rine J. Sir- and silencer-independent disruption of silencing in Saccharomyces by Sas10p. Genetics. 149: 903-14. PMID 9611201 |
0.401 |
|
| 1998 |
Metallinos DL, Bowling AT, Rine J. A missense mutation in the endothelin-B receptor gene is associated with Lethal White Foal Syndrome: an equine version of Hirschsprung disease. Mammalian Genome : Official Journal of the International Mammalian Genome Society. 9: 426-31. PMID 9585428 DOI: 10.1007/S003359900790 |
0.314 |
|
| 1998 |
Carver EA, Issel-Tarver L, Rine J, Olsen AS, Stubbs L. Location of mouse and human genes corresponding to conserved canine olfactory receptor gene subfamilies. Mammalian Genome : Official Journal of the International Mammalian Genome Society. 9: 349-54. PMID 9545490 DOI: 10.1007/S003359900768 |
0.373 |
|
| 1998 |
Aström SU, Rine J. Theme and variation among silencing proteins in Saccharomyces cerevisiae and Kluyveromyces lactis. Genetics. 148: 1021-9. PMID 9539421 |
0.314 |
|
| 1998 |
Acland GM, Ray K, Mellersh CS, Gu W, Langston AA, Rine J, Ostrander EA, Aguirre GD. Linkage analysis and comparative mapping of canine progressive rod-cone degeneration (prcd) establishes potential locus homology with retinitis pigmentosa (RP17) in humans. Proceedings of the National Academy of Sciences of the United States of America. 95: 3048-53. PMID 9501213 DOI: 10.1073/Pnas.95.6.3048 |
0.339 |
|
| 1998 |
Dillin A, Rine J. Roles for ORC in M phase and S phase Science. 279: 1733-1737. PMID 9497294 DOI: 10.1126/Science.279.5357.1733 |
0.598 |
|
| 1997 |
Dillin A, Rine J. Separable functions of ORC5 in replication initiation and silencing in Saccharomyces cerevisiae Genetics. 147: 1053-1062. PMID 9383052 |
0.581 |
|
| 1997 |
Herman PK, Rine J. Yeast spore germination: a requirement for Ras protein activity during re-entry into the cell cycle. The Embo Journal. 16: 6171-81. PMID 9321396 DOI: 10.1093/Emboj/16.20.6171 |
0.327 |
|
| 1997 |
Whistler JL, Rine J. Ras2 and Ras1 protein phosphorylation in Saccharomyces cerevisiae. The Journal of Biological Chemistry. 272: 18790-800. PMID 9228053 DOI: 10.1074/Jbc.272.30.18790 |
0.308 |
|
| 1997 |
Fox CA, Ehrenhofer-Murray AE, Loo S, Rine J. The origin recognition complex, SIR1, and the S phase requirement for silencing Science. 276: 1547. PMID 9171055 DOI: 10.1126/Science.276.5318.1547 |
0.616 |
|
| 1997 |
Moazed D, Kistler A, Axelrod A, Rine J, Johnson AD. Silent information regulator protein complexes in Saccharomyces cerevisiae: a SIR2/SIR4 complex and evidence for a regulatory domain in SIR4 that inhibits its interaction with SIR3. Proceedings of the National Academy of Sciences of the United States of America. 94: 2186-91. PMID 9122169 DOI: 10.1073/Pnas.94.6.2186 |
0.577 |
|
| 1997 |
Yalovsky S, Trueblood CE, Callan KL, Narita JO, Jenkins SM, Rine J, Gruissem W. Plant farnesyltransferase can restore yeast Ras signaling and mating Molecular and Cellular Biology. 17: 1986-1994. PMID 9121446 DOI: 10.1128/Mcb.17.4.1986 |
0.371 |
|
| 1997 |
Boyartchuk VL, Ashby MN, Rine J. Modulation of Ras and a-factor function by carboxyl-terminal proteolysis. Science (New York, N.Y.). 275: 1796-800. PMID 9065405 DOI: 10.1126/Science.275.5307.1796 |
0.371 |
|
| 1996 |
Hampton RY, Gardner RG, Rine J. Role of 26S proteasome and HRD genes in the degradation of 3-hydroxy-3- methylglutaryl-CoA reductase, an integral endoplasmic reticulum membrane protein Molecular Biology of the Cell. 7: 2029-2044. PMID 8970163 DOI: 10.1091/Mbc.7.12.2029 |
0.689 |
|
| 1996 |
Issel-Tarver L, Rine J. Organization and expression of canine olfactory receptor genes. Proceedings of the National Academy of Sciences of the United States of America. 93: 10897-902. PMID 8855279 DOI: 10.1073/Pnas.93.20.10897 |
0.322 |
|
| 1996 |
Dimster-Denk D, Rine J. Transcriptional regulation of a sterol-biosynthetic enzyme by sterol levels in Saccharomyces cerevisiae. Molecular and Cellular Biology. 16: 3981-9. PMID 8754796 DOI: 10.1128/Mcb.16.8.3981 |
0.444 |
|
| 1996 |
Fox CA, Rine J. Influences of the cell cycle on silencing Current Opinion in Cell Biology. 8: 354-357. PMID 8743886 DOI: 10.1016/S0955-0674(96)80009-3 |
0.67 |
|
| 1996 |
Hampton RY, Koning A, Wright R, Rine J. In vivo examination of membrane protein localization and degradation with green fluorescent protein Proceedings of the National Academy of Sciences of the United States of America. 93: 828-833. PMID 8570643 DOI: 10.1073/Pnas.93.2.828 |
0.652 |
|
| 1996 |
Hampton R, Dimster-Denk D, Rine J. The biology of HMG-CoA reductase: the pros of contra-regulation Trends in Biochemical Sciences. 21: 140-145. DOI: 10.1016/S0968-0004(96)80168-X |
0.639 |
|
| 1995 |
Loo S, Rine J. Silencing and heritable domains of gene expression. Annual Review of Cell and Developmental Biology. 11: 519-48. PMID 8689568 DOI: 10.1146/Annurev.Cb.11.110195.002511 |
0.512 |
|
| 1995 |
Parrish ML, Sengstag C, Rine JD, Wright RL. Identification of the sequences in HMG-CoA reductase required for karmellae assembly. Molecular Biology of the Cell. 6: 1535-47. PMID 8589454 DOI: 10.1091/Mbc.6.11.1535 |
0.305 |
|
| 1995 |
Loo S, Laurenson P, Foss M, Dillin A, Rine J. Roles of ABF1, NPL3, and YCL54 in silencing in Saccharomyces cerevisiae Genetics. 141: 889-902. PMID 8582634 |
0.594 |
|
| 1995 |
Fox CA, Loo S, Dillin A, Rine J. The origin recognition complex has essential functions in transcriptional silencing and chromosomal replication Genes and Development. 9: 911-924. PMID 7774809 DOI: 10.1101/Gad.9.8.911 |
0.73 |
|
| 1995 |
Dimster-Denk D, Schafer WR, Rine J. Control of RAS mRNA level by the mevalonate pathway. Molecular Biology of the Cell. 6: 59-70. PMID 7749195 DOI: 10.1091/Mbc.6.1.59 |
0.607 |
|
| 1995 |
Kamb A, Wang C, Thomas A, DeHoff BS, Norris FH, Richardson K, Rine J, Skolnick MH, Rosteck PR. Software trapping: a strategy for finding genes in large genomic regions Computers and Biomedical Research. 28: 140-153. PMID 7656550 DOI: 10.1006/Cbmr.1995.1010 |
0.336 |
|
| 1995 |
Ashby MN, Rine J. Ras and a-factor converting enzyme. Methods in Enzymology. 250: 235-51. PMID 7651155 DOI: 10.1016/0076-6879(95)50076-6 |
0.315 |
|
| 1995 |
Dillin A, Rine J. On the origin of a silencer Trends in Biochemical Sciences. 20: 231-235. PMID 7631420 DOI: 10.1016/S0968-0004(00)89023-4 |
0.656 |
|
| 1995 |
Loo S, Fox CA, Rine J, Kobayashi R, Stillman B, Bell S. The origin recognition complex in silencing, cell cycle progression, and DNA replication Molecular Biology of the Cell. 6: 741-756. PMID 7579692 DOI: 10.1091/Mbc.6.6.741 |
0.614 |
|
| 1995 |
Ehrenhofer-Murray AE, Gossen M, Pak DT, Botchan MR, Rine J. Separation of origin recognition complex functions by cross-species complementation. Science (New York, N.Y.). 270: 1671-4. PMID 7502078 DOI: 10.1126/Science.270.5242.1671 |
0.437 |
|
| 1994 |
Loo S, Rine J. Silencers and domains of generalized repression. Science (New York, N.Y.). 264: 1768-71. PMID 8209257 DOI: 10.1126/Science.8209257 |
0.48 |
|
| 1994 |
Hampton RY, Rine J. Regulated degradation of HMG-CoA reductase, an integral membrane protein of the endoplasmic reticulum, in yeast Journal of Cell Biology. 125: 299-312. PMID 8163547 DOI: 10.1083/Jcb.125.2.299 |
0.653 |
|
| 1994 |
Dimster-Denk D, Thorsness MK, Rine J. Feedback regulation of 3-hydroxy-3-methylglutaryl coenzyme A reductase in Saccharomyces cerevisiae. Molecular Biology of the Cell. 5: 655-65. PMID 7949422 DOI: 10.1091/Mbc.5.6.655 |
0.346 |
|
| 1994 |
Lishanski A, Ostrander EA, Rine J. Mutation detection by mismatch binding protein, MutS, in amplified DNA: application to the cystic fibrosis gene. Proceedings of the National Academy of Sciences of the United States of America. 91: 2674-8. PMID 7511817 DOI: 10.1073/Pnas.91.7.2674 |
0.373 |
|
| 1993 |
Trueblood CE, Ohya Y, Rine J. Genetic evidence for in vivo cross-specificity of the CaaX-box protein prenyltransferases farnesyltransferase and geranylgeranyltransferase-I in Saccharomyces cerevisiae. Molecular and Cellular Biology. 13: 4260-75. PMID 8321228 DOI: 10.1128/Mcb.13.7.4260 |
0.338 |
|
| 1993 |
Foss M, McNally FJ, Laurenson P, Rine J. Origin recognition complex (ORC) in transcriptional silencing and DNA replication in S. cerevisiae Science. 262: 1838-1844. PMID 8266071 DOI: 10.1016/0168-9525(94)90227-5 |
0.737 |
|
| 1993 |
Ashby MN, Errada PR, Boyartchuk VL, Rine J. Isolation and DNA sequence of the STE14 gene encoding farnesyl cysteine: carboxyl methyltransferase. Yeast (Chichester, England). 9: 907-13. PMID 8212897 DOI: 10.1002/Yea.320090810 |
0.402 |
|
| 1993 |
Fox CA, Loo S, Rivier DH, Foss MA, Rine J. A transcriptional silencer as a specialized origin of replication that establishes functional domains of chromatin Cold Spring Harbor Symposia On Quantitative Biology. 58: 443-455. PMID 7956058 DOI: 10.1101/Sqb.1993.058.01.051 |
0.619 |
|
| 1992 |
Rivier DH, Rine J. Silencing: the establishment and inheritance of stable, repressed transcription states. Current Opinion in Genetics & Development. 2: 286-92. PMID 1638123 DOI: 10.1016/S0959-437X(05)80286-2 |
0.467 |
|
| 1992 |
Rivier DH, Rine J. An origin of DNA replication and a transcription silencer require a common element. Science (New York, N.Y.). 256: 659-63. PMID 1585179 DOI: 10.1126/Science.1585179 |
0.429 |
|
| 1992 |
Schafer WR, Rine J. Protein prenylation: genes, enzymes, targets, and functions. Annual Review of Genetics. 26: 209-37. PMID 1482112 DOI: 10.1146/Annurev.Ge.26.120192.001233 |
0.614 |
|
| 1992 |
Ostrander EA, Jong PM, Rine J, Duyk G. Construction of small-insert genomic DNA libraries highly enriched for microsatellite repeat sequences. Proceedings of the National Academy of Sciences of the United States of America. 89: 3419-23. PMID 1314388 DOI: 10.1073/Pnas.89.8.3419 |
0.328 |
|
| 1992 |
Laurenson P, Rine J. Silencers, silencing, and heritable transcriptional states. Microbiological Research. 56: 543-560. DOI: 10.1128/Mmbr.56.4.543-560.1992 |
0.522 |
|
| 1992 |
Herskowitz I, Rine J, Strathern J. 11 Mating-type Determination and Mating-type Interconversion in Saccharomyces cerevisiae Cold Spring Harbor Monograph Archive. 583-656. DOI: 10.1101/087969365.21B.583 |
0.626 |
|
| 1992 |
Rivier DH, Rine J. Silencing of transcription Current Biology. 2: 206. DOI: 10.1016/0960-9822(92)90535-I |
0.37 |
|
| 1991 |
Rine J. Gene overexpression in studies of Saccharomyces cerevisiae. Methods in Enzymology. 194: 239-251. PMID 2005790 DOI: 10.1016/0076-6879(91)94019-9 |
0.423 |
|
| 1991 |
Axelrod A, Rine J. A role for CDC7 in repression of transcription at the silent mating-type locus HMR in Saccharomyces cerevisiae Molecular and Cellular Biology. 11: 1080-1091. PMID 1990268 DOI: 10.1128/Mcb.11.2.1080 |
0.437 |
|
| 1991 |
McNally FJ, Rine J. A Synthetic silencer mediates sir-dependent functions in Saccharomyces cerevisiae Molecular and Cellular Biology. 11: 5648-5659. PMID 1922068 DOI: 10.1128/Mcb.11.11.5648 |
0.722 |
|
| 1990 |
Pillus L, Rine J. Epigenetic inheritance of transcriptional states in S. cerevisiae. Cell. 59: 637-47. PMID 2684414 DOI: 10.1016/0092-8674(89)90009-3 |
0.382 |
|
| 1990 |
Sengstag C, Stirling C, Schekman R, Rine J. Genetic and biochemical evaluation of eucaryotic membrane protein topology: multiple transmembrane domains of Saccharomyces cerevisiae 3-hydroxy-3-methylglutaryl coenzyme A reductase. Molecular and Cellular Biology. 10: 672-80. PMID 2405252 DOI: 10.1128/Mcb.10.2.672 |
0.353 |
|
| 1990 |
Schafer WR, Trueblood CE, Yang CC, Mayer MP, Rosenberg S, Poulter CD, Kim SH, Rine J. Enzymatic coupling of cholesterol intermediates to a mating pheromone precursor and to the ras protein. Science (New York, N.Y.). 249: 1133-9. PMID 2204115 DOI: 10.1126/Science.2204115 |
0.62 |
|
| 1990 |
Finegold AA, Schafer WR, Rine J, Whiteway M, Tamanoi F. Common modifications of trimeric G proteins and ras protein: involvement of polyisoprenylation. Science (New York, N.Y.). 249: 165-9. PMID 1695391 DOI: 10.1126/Science.1695391 |
0.593 |
|
| 1989 |
Basson ME, Thorsness M, Finer-Moore J, Stroud RM, Rine J. Structural and functional conservation between yeast and human 3-hydroxy-3-methylglutaryl coenzyme A reductases, the rate-limiting enzyme of sterol biosynthesis. Molecular and Cellular Biology. 8: 3797-808. PMID 3065625 DOI: 10.1128/Mcb.8.9.3797 |
0.388 |
|
| 1989 |
Thorsness M, Schafer W, D'Ari L, Rine J. Positive and negative transcriptional control by heme of genes encoding 3-hydroxy-3-methylglutaryl coenzyme A reductase in Saccharomyces cerevisiae Molecular and Cellular Biology. 9: 5702-5712. PMID 2685574 DOI: 10.1128/Mcb.9.12.5702 |
0.635 |
|
| 1989 |
Schafer WR, Kim R, Sterne R, Thorner J, Kim SH, Rine J. Genetic and pharmacological suppression of oncogenic mutations in ras genes of yeast and humans. Science (New York, N.Y.). 245: 379-85. PMID 2569235 DOI: 10.1126/Science.2569235 |
0.589 |
|
| 1988 |
Buchman AR, Kimmerly WJ, Rine J, Kornberg RD. Two DNA-binding factors recognize specific sequences at silencers, upstream activating sequences, autonomously replicating sequences, and telomeres in Saccharomyces cerevisiae. Molecular and Cellular Biology. 8: 210-25. PMID 3275867 DOI: 10.1128/Mcb.8.1.210 |
0.364 |
|
| 1988 |
Rio DC, Barnes G, Laski FA, Rine J, Rubin GM. Evidence for Drosophila P element transposase activity in mammalian cells and yeast. Journal of Molecular Biology. 200: 411-5. PMID 2836597 DOI: 10.1016/0022-2836(88)90250-1 |
0.551 |
|
| 1988 |
Kimmerly W, Buchman A, Kornberg R, Rine J. Roles of two DNA-binding factors in replication, segregation and transcriptional repression mediated by a yeast silencer. The Embo Journal. 7: 2241-2253. DOI: 10.1002/J.1460-2075.1988.Tb03064.X |
0.417 |
|
| 1987 |
Kimmerly WJ, Rine J. Replication and segregation of plasmids containing cis-acting regulatory sites of silent mating-type genes in Saccharomyces cerevisiae are controlled by the SIR genes. Molecular and Cellular Biology. 7: 4225-4237. PMID 3325822 DOI: 10.1128/Mcb.7.12.4225 |
0.363 |
|
| 1987 |
Rine J, Herskowitz I. Four genes responsible for a position effect on expression from HML and HMR in Saccharomyces cerevisiae Genetics. 116: 9-22. PMID 3297920 |
0.585 |
|
| 1986 |
Basson ME, Thorsness M, Rine J. Saccharomyces cerevisiae contains two functional genes encoding 3-hydroxy-3-methylglutaryl-coenzyme A reductase. Proceedings of the National Academy of Sciences of the United States of America. 83: 5563-5567. PMID 3526336 DOI: 10.1073/Pnas.83.15.5563 |
0.447 |
|
| 1985 |
Barnes G, Rine J. Regulated expression of endonuclease EcoRI in Saccharomyces cerevisiae: Nuclear entry and biological consequences Proceedings of the National Academy of Sciences of the United States of America. 82: 1354-1358. PMID 2983340 DOI: 10.1073/PNAS.82.5.1354 |
0.625 |
|
| 1985 |
Rine J, Barnes G. Localization of proteins to the nucleus Bioessays. 2: 158-161. DOI: 10.1002/Bies.950020405 |
0.548 |
|
| 1984 |
Barnes G, Hansen WJ, Holcomb CL, Rine J. Asparagine-linked glycosylation in Saccharomyces cerevisiae: genetic analysis of an early step. Molecular and Cellular Biology. 4: 2381-8. PMID 6096695 DOI: 10.1128/Mcb.4.11.2381 |
0.625 |
|
| 1983 |
Rine J, Hansen W, Hardeman E, Davis RW. Targeted selection of recombinant clones through gene dosage effects. Proceedings of the National Academy of Sciences of the United States of America. 80: 6750-6754. PMID 6316322 DOI: 10.1073/Pnas.80.22.6750 |
0.362 |
|
| 1981 |
Rine J, Sprague GF, Herskowitz I. rme1 Mutation of Saccharomyces cerevisiae: Map position and bypass of mating type locus control of sporulation Molecular and Cellular Biology. 1: 958-960. PMID 7050660 DOI: 10.1128/Mcb.1.10.958 |
0.536 |
|
| 1981 |
Sprague GF, Rine J, Herskowitz I. Control of yeast cell type by the mating type locus. II. Genetic interactions between MATα and unlinked α-specific STE genes Journal of Molecular Biology. 153: 323-335. PMID 7040682 DOI: 10.1016/0022-2836(81)90281-3 |
0.588 |
|
| 1981 |
Rine J, Jensen R, Hagen D, Blair L, Herskowitz I. Pattern of switching and fate of the replaced cassette in yeast mating-type interconversion Cold Spring Harbor Symposia On Quantitative Biology. 45: 951-960. PMID 6266770 DOI: 10.1101/Sqb.1981.045.01.112 |
0.683 |
|
| 1981 |
Sprague GF, Rine J, Herskowitz I. Homology and non-homology at the yeast mating type locus Nature. 289: 250-252. PMID 6256657 DOI: 10.1038/289250A0 |
0.543 |
|
| 1980 |
Rine J, Herskowitz I. The trans action of HMRa in mating type interconversion Mgg Molecular & General Genetics. 180: 99-105. PMID 7003314 DOI: 10.1007/Bf00267357 |
0.593 |
|
| 1979 |
Rine J, Strathern JN, Hicks JB, Herskowitz I. A suppressor of mating-type locus mutations in Saccharomyces cerevisiae: Evidence for and identification of cryptic mating-type loci Genetics. 93: 877-901. PMID 397913 |
0.488 |
|
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