Daniel Wagner - Publications

Affiliations: 
Systems Biology Harvard University, Cambridge, MA, United States 

22 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Kraiczy J, McCarthy N, Malagola E, Tie G, Madha S, Boffelli D, Wagner DE, Wang TC, Shivdasani RA. Graded BMP signaling within intestinal crypt architecture directs self-organization of the Wnt-secreting stem cell niche. Cell Stem Cell. 30: 433-449.e8. PMID 37028407 DOI: 10.1016/j.stem.2023.03.004  0.425
2021 Matthews KRW, Wagner DS, Warmflash A. Stem Cell-Based Models of Embryos: The Need for Improved Naming Conventions. Stem Cell Reports. PMID 33770498 DOI: 10.1016/j.stemcr.2021.02.018  0.355
2020 Wagner DE, Klein AM. Lineage tracing meets single-cell omics: opportunities and challenges. Nature Reviews. Genetics. PMID 32235876 DOI: 10.1038/S41576-020-0223-2  0.702
2020 Sharma N, Flaherty K, Lezgiyeva K, Wagner DE, Klein AM, Ginty DD. The emergence of transcriptional identity in somatosensory neurons. Nature. PMID 31915380 DOI: 10.1038/S41586-019-1900-1  0.608
2019 Tewari AG, Owen JH, Petersen CP, Wagner DE, Reddien PW. A small set of conserved genes, including sp5 and Hox, are activated by Wnt signaling in the posterior of planarians and acoels. Plos Genetics. 15: e1008401. PMID 31626630 DOI: 10.1371/Journal.Pgen.1008401  0.627
2019 Gu Q, Yang X, Lv J, Zhang J, Xia B, Kim JD, Wang R, Xiong F, Meng S, Clements TP, Tandon B, Wagner DS, Diaz MF, Wenzel PL, Miller YI, et al. AIBP-mediated cholesterol efflux instructs hematopoietic stem and progenitor cell fate. Science (New York, N.Y.). PMID 30705153 DOI: 10.1126/Science.Aav1749  0.36
2018 Wang IE, Wagner DE, Reddien PW. Clonal Analysis of Planarian Stem Cells by Subtotal Irradiation and Single-Cell Transplantation. Methods in Molecular Biology (Clifton, N.J.). 1774: 479-495. PMID 29916173 DOI: 10.1007/978-1-4939-7802-1_20  0.747
2018 Wagner DE, Weinreb C, Collins ZM, Briggs JA, Megason SG, Klein AM. Single-cell mapping of gene expression landscapes and lineage in the zebrafish embryo. Science (New York, N.Y.). PMID 29700229 DOI: 10.1126/Science.Aar4362  0.787
2018 Briggs JA, Weinreb C, Wagner DE, Megason S, Peshkin L, Kirschner MW, Klein AM. The dynamics of gene expression in vertebrate embryogenesis at single-cell resolution. Science (New York, N.Y.). PMID 29700227 DOI: 10.1126/Science.Aar5780  0.775
2018 Raj B, Wagner DE, McKenna A, Pandey S, Klein AM, Shendure J, Gagnon JA, Schier AF. Simultaneous single-cell profiling of lineages and cell types in the vertebrate brain. Nature Biotechnology. PMID 29608178 DOI: 10.1038/Nbt.4103  0.706
2017 Wagner DE, Klein AM. Genetic screening enters the single-cell era. Nature Methods. 14: 237-238. PMID 28245215 DOI: 10.1038/Nmeth.4196  0.596
2016 Eisenhoffer GT, Slattum G, Ruiz OE, Otsuna H, Bryan CD, Lopez J, Wagner DS, Bonkowsky JL, Chien CB, Dorsky RI, Rosenblatt J. A toolbox to study epidermal cell types in zebrafish. Journal of Cell Science. PMID 27149923 DOI: 10.1242/Jcs.184341  0.365
2015 Hirota S, Clements TP, Tang LK, Morales JE, Lee HS, Oh SP, Rivera GM, Wagner DS, McCarty JH. Neuropilin-1 balances β8 integrin-activated TGFβ signaling to control sprouting angiogenesis in the brain. Development (Cambridge, England). PMID 26586223 DOI: 10.1242/dev.113746  0.344
2015 Swindell EC, Yuan Q, Maili LE, Tandon B, Wagner DS, Hecht JT. Crispld2 is required for neural crest cell migration and cell viability during zebrafish craniofacial development. Genesis (New York, N.Y. : 2000). PMID 26297922 DOI: 10.1002/dvg.22897  0.377
2015 Owen JH, Wagner DE, Chen CC, Petersen CP, Reddien PW. teashirt is required for head-versus-tail regeneration polarity in planarians. Development (Cambridge, England). 142: 1062-72. PMID 25725068 DOI: 10.1242/Dev.119685  0.761
2014 van Wolfswinkel JC, Wagner DE, Reddien PW. Single-cell analysis reveals functionally distinct classes within the planarian stem cell compartment. Cell Stem Cell. 15: 326-39. PMID 25017721 DOI: 10.1016/J.Stem.2014.06.007  0.725
2013 Witchley JN, Mayer M, Wagner DE, Owen JH, Reddien PW. Muscle cells provide instructions for planarian regeneration. Cell Reports. 4: 633-41. PMID 23954785 DOI: 10.1016/J.Celrep.2013.07.022  0.687
2012 Lukianova-Hleb EY, Wagner DS, Brenner MK, Lapotko DO. Cell-specific transmembrane injection of molecular cargo with gold nanoparticle-generated transient plasmonic nanobubbles. Biomaterials. 33: 5441-50. PMID 22521612 DOI: 10.1016/j.biomaterials.2012.03.077  0.361
2012 Wagner DE, Ho JJ, Reddien PW. Genetic regulators of a pluripotent adult stem cell system in planarians identified by RNAi and clonal analysis. Cell Stem Cell. 10: 299-311. PMID 22385657 DOI: 10.1016/J.Stem.2012.01.016  0.737
2011 Miller RK, Canny SG, Jang CW, Cho K, Ji H, Wagner DS, Jones EA, Habas R, McCrea PD. Pronephric tubulogenesis requires Daam1-mediated planar cell polarity signaling. Journal of the American Society of Nephrology : Jasn. 22: 1654-64. PMID 21804089 DOI: 10.1681/Asn.2010101086  0.321
2011 Wagner DE, Wang IE, Reddien PW. Clonogenic neoblasts are pluripotent adult stem cells that underlie planarian regeneration. Science (New York, N.Y.). 332: 811-6. PMID 21566185 DOI: 10.1126/Science.1203983  0.752
2009 Holloway BA, Gomez de la Torre Canny S, Ye Y, Slusarski DC, Freisinger CM, Dosch R, Chou MM, Wagner DS, Mullins MC. A novel role for MAPKAPK2 in morphogenesis during zebrafish development. Plos Genetics. 5: e1000413. PMID 19282986 DOI: 10.1371/Journal.Pgen.1000413  0.328
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