Roman Bauer - Publications

Affiliations: 
Newcastle University, Newcastle upon Tyne, England, United Kingdom 

15/38 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2021 Breitwieser L, Hesam A, de Montigny J, Vavourakis V, Iosif A, Jennings J, Kaiser M, Manca M, Di Meglio A, Al-Ars Z, Rademakers F, Mutlu O, Bauer R. BioDynaMo: a modular platform for high-performance agent-based simulation. Bioinformatics (Oxford, England). PMID 34529036 DOI: 10.1093/bioinformatics/btab649  0.417
2021 Bauer R, Clowry GJ, Kaiser M. Creative Destruction: A Basic Computational Model of Cortical Layer Formation. Cerebral Cortex (New York, N.Y. : 1991). PMID 33625496 DOI: 10.1093/cercor/bhab003  0.489
2020 Kassraian-Fard P, Pfeiffer M, Bauer R. A generative growth model for thalamocortical axonal branching in primary visual cortex. Plos Computational Biology. 16: e1007315. PMID 32053598 DOI: 10.1371/Journal.Pcbi.1007315  0.585
2020 de Montigny J, Iosif A, Breitwieser L, Manca M, Bauer R, Vavourakis V. An in silico hybrid continuum-/agent-based procedure to modelling cancer development: interrogating the interplay amongst glioma invasion, vascularity and necrosis. Methods (San Diego, Calif.). PMID 31981608 DOI: 10.1016/J.Ymeth.2020.01.006  0.317
2019 Peraza LR, Díaz-Parra A, Kennion O, Moratal D, Taylor JP, Kaiser M, Bauer R. Structural connectivity centrality changes mark the path toward Alzheimer's disease. Alzheimer's & Dementia (Amsterdam, Netherlands). 11: 98-107. PMID 30723773 DOI: 10.1016/J.Dadm.2018.12.004  0.418
2019 Mellough CB, Bauer R, Collin J, Dorgau B, Zerti D, Dolan DWP, Jones CM, Izuogu OG, Yu M, Hallam D, Steyn JS, White K, Steel DH, Santibanez-Koref M, Elliott DJ, et al. An integrated transcriptional analysis of the developing human retina. Development (Cambridge, England). 146. PMID 30696714 DOI: 10.1242/Dev.169474  0.31
2019 Collin J, Zerti D, Queen R, Santos-Ferreira T, Bauer R, Coxhead J, Hussain R, Steel D, Mellough C, Ader M, Sernagor E, Armstrong L, Lako M. CRX Expression in Pluripotent Stem Cell-Derived Photoreceptors Marks a Transplantable Subpopulation of Early Cones. Stem Cells (Dayton, Ohio). PMID 30681766 DOI: 10.1002/Stem.2974  0.315
2018 Felemban M, Dorgau B, Hunt NC, Hallam D, Zerti D, Bauer R, Ding Y, Collin J, Steel D, Krasnogor N, Al-Aama J, Lindsay S, Mellough C, Lako M. Extracellular matrix expression in human pluripotent stem cell-derived retinal organoids recapitulates retinogenesis in vivo and reveals an important role for IMPG1 and CD44 in the development of photoreceptors and interphotoreceptor matrix. Acta Biomaterialia. PMID 29777959 DOI: 10.1016/J.Actbio.2018.05.023  0.305
2018 Gonzalez-de-Aledo P, Vladimirov A, Manca M, Baugh J, Asai R, Kaiser M, Bauer R. An optimization approach for agent-based computational models of biological development Advances in Engineering Software. 121: 262-275. DOI: 10.1016/J.Advengsoft.2018.03.010  0.502
2017 Bauer R, Kaiser M. Nonlinear growth: an origin of hub organization in complex networks. Royal Society Open Science. 4: 160691. PMID 28405356 DOI: 10.1098/Rsos.160691  0.515
2014 Bauer R, Zubler F, Pfister S, Hauri A, Pfeiffer M, Muir DR, Douglas RJ. Developmental self-construction and -configuration of functional neocortical neuronal networks. Plos Computational Biology. 10: e1003994. PMID 25474693 DOI: 10.1371/Journal.Pcbi.1003994  0.625
2014 Bauer R, Kaiser M, Stoll E. A computational model incorporating neural stem cell dynamics reproduces glioma incidence across the lifespan in the human population. Plos One. 9: e111219. PMID 25409511 DOI: 10.1371/Journal.Pone.0111219  0.485
2014 Bauer R, Zubler F, Hauri A, Muir DR, Douglas RJ. Developmental origin of patchy axonal connectivity in the neocortex: a computational model. Cerebral Cortex (New York, N.Y. : 1991). 24: 487-500. PMID 23131803 DOI: 10.1093/Cercor/Bhs327  0.639
2013 Zubler F, Hauri A, Pfister S, Bauer R, Anderson JC, Whatley AM, Douglas RJ. Simulating cortical development as a self constructing process: a novel multi-scale approach combining molecular and physical aspects. Plos Computational Biology. 9: e1003173. PMID 23966845 DOI: 10.1371/Journal.Pcbi.1003173  0.728
2009 Pfister S, Hauri A, Zubler F, Bauer R, Whatley A, Douglas R. Computer simulation of cortical development Frontiers in Neuroinformatics. 3. DOI: 10.3389/Conf.Neuro.11.2009.08.114  0.675
Low-probability matches (unlikely to be authored by this person)
2018 Dorgau B, Felemban M, Sharpe A, Bauer R, Hallam D, Steel DH, Lindsay S, Mellough C, Lako M. Laminin γ3 plays an important role in retinal lamination, photoreceptor organisation and ganglion cell differentiation. Cell Death & Disease. 9: 615. PMID 29795281 DOI: 10.1038/S41419-018-0648-0  0.299
2000 Frien A, Eckhorn R, Bauer R, Woelbern T, Gabriel A. Fast oscillations display sharper orientation tuning than slower components of the same recordings in striate cortex of the awake monkey. The European Journal of Neuroscience. 12: 1453-65. PMID 10762373 DOI: 10.1046/J.1460-9568.2000.00025.X  0.298
2002 Woelbern T, Eckhorn R, Frien A, Bauer R. Perceptual grouping correlates with short synchronization in monkey prestriate cortex. Neuroreport. 13: 1881-6. PMID 12395084 DOI: 10.1097/00001756-200210280-00010  0.289
1997 Brosch M, Bauer R, Eckhorn R. Stimulus-dependent modulations of correlated high-frequency oscillations in cat visual cortex. Cerebral Cortex (New York, N.Y. : 1991). 7: 70-6. PMID 9023434 DOI: 10.1093/Cercor/7.1.70  0.288
2019 Jennings J, Bauer R, Breitwieser L. Computational Modelling Of Slow Freezing Using The Biodynamo Software Package Cryodynamo Cryobiology. 91: 191-192. DOI: 10.1016/J.Cryobiol.2019.10.175  0.272
2020 Bojic S, Falco MM, Stojkovic P, Ljujic B, Gazdic Jankovic M, Armstrong L, Markovic N, Dopazo J, Lako M, Bauer R, Stojkovic M. Platform to study intracellular polystyrene nanoplastic pollution and clinical outcomes. Stem Cells (Dayton, Ohio). PMID 32614127 DOI: 10.1002/Stem.3244  0.262
2023 de Montigny J, Sernagor E, Bauer R. Retinal self-organization: a model of retinal ganglion cells and starburst amacrine cells mosaic formation. Open Biology. 13: 220217. PMID 37015288 DOI: 10.1098/rsob.220217  0.242
2019 Bojic S, Ljujic B, Georgiou M, Bauer R. Slow Freezing Of Murine Retina At Different Sub-Zero Temperatures Cryobiology. 91: 187. DOI: 10.1016/J.Cryobiol.2019.10.159  0.207
2002 Bauer R, Heinze S. Contour integration in striate cortex. Classic cell responses or cooperative selection? Experimental Brain Research. 147: 145-52. PMID 12410329 DOI: 10.1007/s00221-002-1178-6  0.164
2021 Zerti D, Molina MM, Dorgau B, Mearns S, Bauer R, Al-Aama J, Lako M. IGFBPs mediate IGF-1's functions in retinal lamination and photoreceptor development during pluripotent stem cell differentiation to retinal organoids. Stem Cells (Dayton, Ohio). PMID 33442906 DOI: 10.1002/stem.3331  0.153
2002 Bauer R, Heinze S. Inter-cellular spike coincidences in visual detection tasks. Die Naturwissenschaften. 89: 316-8. PMID 12216863  0.138
2022 Cogno N, Bauer R, Durante M. An Agent-Based Model of Radiation-Induced Lung Fibrosis. International Journal of Molecular Sciences. 23. PMID 36430398 DOI: 10.3390/ijms232213920  0.13
2022 Demetriades M, Zivanovic M, Hadjicharalambous M, Ioannou E, Ljujic B, Vucicevic K, Ivosevic Z, Dagovic A, Milivojevic N, Kokkinos O, Bauer R, Vavourakis V. Interrogating and Quantifying In Vitro Cancer Drug Pharmacodynamics via Agent-Based and Bayesian Monte Carlo Modelling. Pharmaceutics. 14. PMID 35456583 DOI: 10.3390/pharmaceutics14040749  0.113
2009 Meisner NC, Hintersteiner M, Seifert JM, Bauer R, Benoit RM, Widmer A, Schindler T, Uhl V, Lang M, Gstach H, Auer M. Terminal adenosyl transferase activity of posttranscriptional regulator HuR revealed by confocal on-bead screening. Journal of Molecular Biology. 386: 435-50. PMID 19109971 DOI: 10.1016/j.jmb.2008.12.020  0.083
2007 Meisner NC, Hintersteiner M, Mueller K, Bauer R, Seifert JM, Naegeli HU, Ottl J, Oberer L, Guenat C, Moss S, Harrer N, Woisetschlaeger M, Buehler C, Uhl V, Auer M. Identification and mechanistic characterization of low-molecular-weight inhibitors for HuR. Nature Chemical Biology. 3: 508-15. PMID 17632515 DOI: 10.1038/nchembio.2007.14  0.082
2022 Sakhaee E, Amirahmadi A, Mahdiani M, Shojaei M, Hassanian-Moghaddam H, Bauer R, Zamani N, Pakdaman H, Gharagozli K. Developing a novel prediction model in opioid overdose using machine learning; a pilot analytical study. Health Science Reports. 5: e767. PMID 35949676 DOI: 10.1002/hsr2.767  0.077
2021 Bojic S, Murray A, Bentley BL, Spindler R, Pawlik P, Cordeiro JL, Bauer R, de Magalhães JP. Winter is coming: the future of cryopreservation. Bmc Biology. 19: 56. PMID 33761937 DOI: 10.1186/s12915-021-00976-8  0.072
2006 Bauer R, Scheiblhofer S, Kern K, Gruber C, Stepanoska T, Thalhamer T, Hauser-Kronberger C, Alinger B, Zoegg T, Gabler M, Ferreira F, Hartl A, Thalhamer J, Weiss R. Generation of hypoallergenic DNA vaccines by forced ubiquitination: preventive and therapeutic effects in a mouse model of allergy. The Journal of Allergy and Clinical Immunology. 118: 269-76. PMID 16815165 DOI: 10.1016/j.jaci.2006.03.033  0.066
2009 Hintersteiner M, Kimmerlin T, Garavel G, Schindler T, Bauer R, Meisner NC, Seifert JM, Uhl V, Auer M. A highly potent and cellularly active beta-peptidic inhibitor of the p53/hDM2 interaction. Chembiochem : a European Journal of Chemical Biology. 10: 994-8. PMID 19267375 DOI: 10.1002/cbic.200800803  0.063
2022 Jennings JL, Peraza LR, Baker M, Alter K, Taylor JP, Bauer R. Investigating the power of eyes open resting state EEG for assisting in dementia diagnosis. Alzheimer's Research & Therapy. 14: 109. PMID 35932060 DOI: 10.1186/s13195-022-01046-z  0.059
2003 Hartl A, Weiss R, Hochreiter R, Scheiblhofer S, Bauer R, Valenta R, Ferreira F, Leitner W, Thalhamer J. Strategies for the development of safe and effective DNA vaccines for allergy treatment. Arbeiten Aus Dem Paul-Ehrlich-Institut (Bundesamt FüR Sera Und Impfstoffe) Zu Frankfurt a.M. 279-98; discussion 2. PMID 15119049  0.057
2009 Gruber P, Gadermaier G, Bauer R, Weiss R, Wagner S, Leonard R, Breiteneder H, Ebner C, Ferreira F, Egger M. Role of the polypeptide backbone and post-translational modifications in cross-reactivity of Art v 1, the major mugwort pollen allergen. Biological Chemistry. 390: 445-51. PMID 19361284 DOI: 10.1515/BC.2009.063  0.051
2019 Sander M, Bauer R, Kabanova V, Levantino M, Wulff M, Pfuetzenreuter D, Schwarzkopf J, Gaal P. Demonstration of a picosecond Bragg switch for hard X-rays in a synchrotron-based pump-probe experiment. Journal of Synchrotron Radiation. 26: 1253-1259. PMID 31274451 DOI: 10.1107/S1600577519005356  0.027
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