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August Woerner - Publications

Affiliations: 
Ecology and Evolutionary Biology University of Arizona, Tucson, AZ 
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37 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Woerner AE, Novroski NM, Mandape S, King JL, Crysup B, Coble MD. Identifying distant relatives using benchtop-scale sequencing. Forensic Science International. Genetics. 69: 103005. PMID 38171224 DOI: 10.1016/j.fsigen.2023.103005  0.306
2022 Woerner AE, Mandape S, Kapema KB, Duque TM, Smuts A, King JL, Crysup B, Wang X, Huang M, Ge J, Budowle B. Optimized variant calling for estimating kinship. Forensic Science International. Genetics. 61: 102785. PMID 36206658 DOI: 10.1016/j.fsigen.2022.102785  0.346
2022 Turner SD, Nagraj VP, Scholz M, Jessa S, Acevedo C, Ge J, Woerner AE, Budowle B. Evaluating the Impact of Dropout and Genotyping Error on SNP-Based Kinship Analysis With Forensic Samples. Frontiers in Genetics. 13: 882268. PMID 35846115 DOI: 10.3389/fgene.2022.882268  0.316
2021 Mandape SN, Smart U, King JL, Muenzler M, Kapema KB, Budowle B, Woerner AE. MMDIT: A tool for the deconvolution and interpretation of mitochondrial DNA mixtures. Forensic Science International. Genetics. 55: 102568. PMID 34416654 DOI: 10.1016/j.fsigen.2021.102568  0.727
2021 Moura-Neto R, King JL, Mello I, Dias V, Crysup B, Woerner AE, Budowle B, Silva R. Evaluation of Promega PowerSeq™ Auto/Y systems prototype on an admixed sample of Rio de Janeiro, Brazil: Population data, sensitivity, stutter and mixture studies. Forensic Science International. Genetics. 53: 102516. PMID 33878618 DOI: 10.1016/j.fsigen.2021.102516  0.365
2021 Crysup B, Woerner AE, King JL, Budowle B. Graph Algorithms for Mixture Interpretation. Genes. 12. PMID 33514030 DOI: 10.3390/genes12020185  0.387
2021 Smart U, Cihlar JC, Mandape SN, Muenzler M, King JL, Budowle B, Woerner AE. A Continuous Statistical Phasing Framework for the Analysis of Forensic Mitochondrial DNA Mixtures. Genes. 12. PMID 33498312 DOI: 10.3390/genes12020128  0.741
2021 Song B, Woerner AE, Planz J. mixIndependR: a R package for statistical independence testing of loci in database of multi-locus genotypes. Bmc Bioinformatics. 22: 12. PMID 33407074 DOI: 10.1186/s12859-020-03945-0  0.324
2020 Woerner AE, Cihlar JC, Smart U, Budowle B. Numt identification and removal with RtN! Bioinformatics (Oxford, England). PMID 32706871 DOI: 10.1093/bioinformatics/btaa642  0.734
2019 Smart U, Budowle B, Ambers A, Soares Moura-Neto R, Silva R, Woerner AE. A novel phylogenetic approach for de novo discovery of putative nuclear mitochondrial (pNumt) haplotypes. Forensic Science International. Genetics. 43: 102146. PMID 31446343 DOI: 10.1016/j.fsigen.2019.102146  0.755
2019 Novroski NMM, Wendt FR, Woerner AE, Bus MM, Coble M, Budowle B. Expanding beyond the current core STR loci: An exploration of 73 STR markers with increased diversity for enhanced DNA mixture deconvolution. Forensic Science International. Genetics. 38: 121-129. PMID 30396008 DOI: 10.1016/j.fsigen.2018.10.013  0.372
2018 Novroski NMM, Woerner AE, Budowle B. Potential highly polymorphic short tandem repeat markers for enhanced forensic identity testing. Forensic Science International. Genetics. 37: 162-171. PMID 30176438 DOI: 10.1016/j.fsigen.2018.08.011  0.318
2018 Woerner AE, Veeramah KR, Watkins JC, Hammer MF. The role of phylogenetically conserved elements in shaping patterns of human genomic diversity. Molecular Biology and Evolution. PMID 30113695 DOI: 10.1093/Molbev/Msy145  0.629
2018 Woerner AE, Ambers A, Wendt FR, King JL, Moura-Neto RS, Silva R, Budowle B. Evaluation of the precision ID mtDNA whole genome panel on two massively parallel sequencing systems. Forensic Science International. Genetics. 36: 213-224. PMID 30059903 DOI: 10.1016/j.fsigen.2018.07.015  0.366
2018 Quinto-Cortés CD, Woerner AE, Watkins JC, Hammer MF. Modeling SNP array ascertainment with Approximate Bayesian Computation for demographic inference. Scientific Reports. 8: 10209. PMID 29977040 DOI: 10.1038/S41598-018-28539-Y  0.591
2017 Moura-Neto RS, Mello ICT, Silva R, Maette APC, Bottino CG, Woerner A, King J, Wendt F, Budowle B. Evaluation of InnoTyper® 21 in a sample of Rio de Janeiro population as an alternative forensic panel. International Journal of Legal Medicine. PMID 28748403 DOI: 10.1007/S00414-017-1642-2  0.452
2016 Hsieh P, Woerner AE, Wall JD, Lachance J, Tishkoff SA, Gutenkunst RN, Hammer MF. Corrigendum: Model-based analyses of whole-genome data reveal a complex evolutionary history involving archaic introgression in Central African Pygmies. Genome Research. 26: 717.1. PMID 27197244 DOI: 10.1101/Gr.206524.116  0.533
2016 Hsieh P, Woerner AE, Wall JD, Lachance J, Tishkoff SA, Gutenkunst RN, Hammer MF. Model-based analyses of whole-genome data reveal a complex evolutionary history involving archaic introgression in Central African Pygmies. Genome Research. PMID 26888264 DOI: 10.1101/Gr.196634.115  0.646
2015 Stevison LS, Woerner AE, Kidd JM, Kelley JL, Veeramah KR, McManus KF, Bustamante CD, Hammer MF, Wall JD. The Time-Scale Of Recombination Rate Evolution In Great Apes. Molecular Biology and Evolution. PMID 26671457 DOI: 10.1093/Molbev/Msv331  0.565
2015 Nam K, Munch K, Hobolth A, Dutheil JY, Veeramah KR, Woerner AE, Hammer MF, Mailund T, Schierup MH. Extreme selective sweeps independently targeted the X chromosomes of the great apes. Proceedings of the National Academy of Sciences of the United States of America. 112: 6413-8. PMID 25941379 DOI: 10.1073/Pnas.1419306112  0.539
2015 Veeramah KR, Woerner AE, Johnstone L, Gut I, Gut M, Marques-Bonet T, Carbone L, Wall JD, Hammer MF. Examining phylogenetic relationships among gibbon genera using whole genome sequence data using an approximate bayesian computation approach. Genetics. 200: 295-308. PMID 25769979 DOI: 10.1534/Genetics.115.174425  0.617
2015 McManus KF, Kelley JL, Song S, Veeramah KR, Woerner AE, Stevison LS, Ryder OA, Ape Genome Project G, Kidd JM, Wall JD, Bustamante CD, Hammer MF. Inference of gorilla demographic and selective history from whole-genome sequence data. Molecular Biology and Evolution. 32: 600-12. PMID 25534031 DOI: 10.1093/Molbev/Msu394  0.622
2014 Carbone L, Harris RA, Gnerre S, Veeramah KR, Lorente-Galdos B, Huddleston J, Meyer TJ, Herrero J, Roos C, Aken B, Anaclerio F, Archidiacono N, Baker C, Barrell D, Batzer MA, ... ... Woerner AE, et al. Gibbon genome and the fast karyotype evolution of small apes. Nature. 513: 195-201. PMID 25209798 DOI: 10.1038/Nature13679  0.723
2014 Veeramah KR, Gutenkunst RN, Woerner AE, Watkins JC, Hammer MF. Evidence for increased levels of positive and negative selection on the X chromosome versus autosomes in humans. Molecular Biology and Evolution. 31: 2267-82. PMID 24830675 DOI: 10.1093/Molbev/Msu166  0.513
2013 Prado-Martinez J, Sudmant PH, Kidd JM, Li H, Kelley JL, Lorente-Galdos B, Veeramah KR, Woerner AE, O'Connor TD, Santpere G, Cagan A, Theunert C, Casals F, Laayouni H, Munch K, et al. Great ape genetic diversity and population history. Nature. 499: 471-5. PMID 23823723 DOI: 10.1038/Nature12228  0.6
2013 Mendez FL, Krahn T, Schrack B, Krahn AM, Veeramah KR, Woerner AE, Fomine FL, Bradman N, Thomas MG, Karafet TM, Hammer MF. An African American paternal lineage adds an extremely ancient root to the human Y chromosome phylogenetic tree. American Journal of Human Genetics. 92: 454-9. PMID 23453668 DOI: 10.1016/J.Ajhg.2013.02.002  0.732
2013 Wall JD, Yang MA, Jay F, Kim SK, Durand EY, Stevison LS, Gignoux C, Woerner A, Hammer MF, Slatkin M. Higher levels of neanderthal ancestry in East Asians than in Europeans. Genetics. 194: 199-209. PMID 23410836 DOI: 10.1534/Genetics.112.148213  0.683
2012 Veeramah KR, Wegmann D, Woerner A, Mendez FL, Watkins JC, Destro-Bisol G, Soodyall H, Louie L, Hammer MF. An early divergence of KhoeSan ancestors from those of other modern humans is supported by an ABC-based analysis of autosomal resequencing data. Molecular Biology and Evolution. 29: 617-30. PMID 21890477 DOI: 10.1093/Molbev/Msr212  0.725
2011 Hammer MF, Woerner AE, Mendez FL, Watkins JC, Wall JD. Genetic evidence for archaic admixture in Africa. Proceedings of the National Academy of Sciences of the United States of America. 108: 15123-8. PMID 21896735 DOI: 10.1073/Pnas.1109300108  0.765
2010 Hammer MF, Woerner AE, Mendez FL, Watkins JC, Cox MP, Wall JD. The ratio of human X chromosome to autosome diversity is positively correlated with genetic distance from genes. Nature Genetics. 42: 830-1. PMID 20802480 DOI: 10.1038/Ng.651  0.734
2009 Cox MP, Morales DA, Woerner AE, Sozanski J, Wall JD, Hammer MF. Autosomal resequence data reveal Late Stone Age signals of population expansion in sub-Saharan African foraging and farming populations. Plos One. 4: e6366. PMID 19641603 DOI: 10.1371/journal.pone.0006366  0.555
2008 Cox MP, Woerner AE, Wall JD, Hammer MF. Intergenic DNA sequences from the human X chromosome reveal high rates of global gene flow. Bmc Genetics. 9: 76. PMID 19038041 DOI: 10.1186/1471-2156-9-76  0.604
2008 Hammer MF, Mendez FL, Cox MP, Woerner AE, Wall JD. Sex-biased evolutionary forces shape genomic patterns of human diversity. Plos Genetics. 4: e1000202. PMID 18818765 DOI: 10.1371/Journal.Pgen.1000202  0.773
2008 Wall JD, Cox MP, Mendez FL, Woerner A, Severson T, Hammer MF. A novel DNA sequence database for analyzing human demographic history. Genome Research. 18: 1354-61. PMID 18493019 DOI: 10.1101/Gr.075630.107  0.777
2008 Pilkington MM, Wilder JA, Mendez FL, Cox MP, Woerner A, Angui T, Kingan S, Mobasher Z, Batini C, Destro-Bisol G, Soodyall H, Strassmann BI, Hammer MF. Contrasting signatures of population growth for mitochondrial DNA and Y chromosomes among human populations in Africa. Molecular Biology and Evolution. 25: 517-25. PMID 18093995 DOI: 10.1093/Molbev/Msm279  0.752
2007 Woerner AE, Cox MP, Hammer MF. Recombination-filtered genomic datasets by information maximization. Bioinformatics (Oxford, England). 23: 1851-3. PMID 17519249 DOI: 10.1093/bioinformatics/btm253  0.529
2007 Brown BT, Woerner A, Wilder JA. Ascertainment bias and the pattern of nucleotide diversity at the human ALDH2 locus in a Japanese population. Journal of Molecular Evolution. 64: 375-85. PMID 17225965 DOI: 10.1007/S00239-006-0149-0  0.683
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