Year |
Citation |
Score |
2024 |
Lu J, Rincon N, Wood DE, Breitwieser FP, Pockrandt C, Langmead B, Salzberg SL, Steinegger M. Author Correction: Metagenome analysis using the Kraken software suite. Nature Protocols. PMID 39210095 DOI: 10.1038/s41596-024-01064-1 |
0.584 |
|
2022 |
Lu J, Rincon N, Wood DE, Breitwieser FP, Pockrandt C, Langmead B, Salzberg SL, Steinegger M. Metagenome analysis using the Kraken software suite. Nature Protocols. PMID 36171387 DOI: 10.1038/s41596-022-00738-y |
0.608 |
|
2022 |
Keefer LA, White JR, Wood DE, Gerding KMR, Valkenburg KC, Riley D, Gault C, Papp E, Vollmer CM, Greer A, Hernandez J, McGregor PM, Zingone A, Ryan BM, Deak K, et al. Automated next-generation profiling of genomic alterations in human cancers. Nature Communications. 13: 2830. PMID 35595835 DOI: 10.1038/s41467-022-30380-x |
0.632 |
|
2021 |
Salzberg SL, Wood DE. Releasing the Kraken. Frontiers in Bioinformatics. 1: 808003. PMID 36303747 DOI: 10.3389/fbinf.2021.808003 |
0.498 |
|
2019 |
Wood DE, Lu J, Langmead B. Improved metagenomic analysis with Kraken 2. Genome Biology. 20: 257. PMID 31779668 DOI: 10.1186/S13059-019-1891-0 |
0.609 |
|
2018 |
Wood DE, White JR, Georgiadis A, Van Emburgh B, Parpart-Li S, Mitchell J, Anagnostou V, Niknafs N, Karchin R, Papp E, McCord C, LoVerso P, Riley D, Diaz LA, Jones S, et al. A machine learning approach for somatic mutation discovery. Science Translational Medicine. 10. PMID 30185652 DOI: 10.1126/Scitranslmed.Aar7939 |
0.591 |
|
2014 |
Merchant S, Wood DE, Salzberg SL. Unexpected cross-species contamination in genome sequencing projects. Peerj. 2: e675. PMID 25426337 DOI: 10.7717/peerj.675 |
0.585 |
|
2014 |
Wood DE, Salzberg SL. Kraken: ultrafast metagenomic sequence classification using exact alignments. Genome Biology. 15: R46. PMID 24580807 DOI: 10.1186/gb-2014-15-3-r46 |
0.512 |
|
2013 |
Magoc T, Wood D, Salzberg SL. EDGE-pro: Estimated Degree of Gene Expression in Prokaryotic Genomes. Evolutionary Bioinformatics Online. 9: 127-36. PMID 23531787 DOI: 10.4137/Ebo.S11250 |
0.667 |
|
2012 |
Wood DE, Lin H, Levy-Moonshine A, Swaminathan R, Chang YC, Anton BP, Osmani L, Steffen M, Kasif S, Salzberg SL. Thousands of missed genes found in bacterial genomes and their analysis with COMBREX. Biology Direct. 7: 37. PMID 23111013 DOI: 10.1186/1745-6150-7-37 |
0.566 |
|
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