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Pedro J Batista - Publications

Affiliations: 
2011-2016 Stanford University, Palo Alto, CA 
 2016- Laboratory of Cell Biology National Cancer Institute, Rockville, MD, United States 
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41 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2024 González Dalmasy JM, Fitzsimmons CM, Frye WJE, Perciaccante AJ, Jewell CP, Jenkins LM, Batista PJ, Robey RW, Gottesman MM. The thiol methyltransferase activity of TMT1A (METTL7A) is conserved across species. Chemico-Biological Interactions. 394: 110989. PMID 38574836 DOI: 10.1016/j.cbi.2024.110989  0.771
2024 Mandler MD, Maligireddy SS, Guiblet WM, Fitzsimmons CM, McDonald KS, Warrell DL, Batista PJ. The modification landscape of tRNAs. Biorxiv : the Preprint Server For Biology. PMID 38529508 DOI: 10.1101/2024.02.21.581370  0.774
2024 Fitzsimmons CM, Mandler MD, Lunger JC, Chan D, Maligireddy SS, Schmiechen AC, Gamage ST, Link C, Jenkins LM, Chan K, Andresson T, Crooks DR, Meier JL, Linehan WM, Batista PJ. Rewiring of RNA methylation by the oncometabolite fumarate in renal cell carcinoma. Nar Cancer. 6: zcae004. PMID 38328795 DOI: 10.1093/narcan/zcae004  0.797
2023 Robey RW, Fitzsimmons CM, Guiblet WM, Frye WJE, González Dalmasy JM, Wang L, Russell DA, Huff LM, Perciaccante AJ, Ali-Rahmani F, Lipsey CC, Wade HM, Mitchell AV, Maligireddy SS, Terrero D, ... ... Batista PJ, et al. The methyltransferases METTL7A and METTL7B confer resistance to thiol-based histone deacetylase inhibitors. Molecular Cancer Therapeutics. PMID 38151817 DOI: 10.1158/1535-7163.MCT-23-0144  0.761
2023 González Dalmasy JM, Fitzsimmons CM, Frye WJE, Perciaccante AJ, Jewell CP, Jenkins LM, Batista PJ, Robey RW, Gottesman MM. The thiol methyltransferase activity of TMT1A (METTL7A) is conserved across species. Biorxiv : the Preprint Server For Biology. PMID 38076968 DOI: 10.1101/2023.11.17.567538  0.771
2023 Crooks DR, Cawthon GM, Fitzsimmons CM, Perez M, Ricketts CJ, Vocke CD, Yang Y, Middelton L, Nielsen D, Schmidt LS, Tandon M, Merino MJ, Ball MW, Meier JL, Batista PJ, et al. Cryptic splice mutation in the fumarate hydratase gene in patients with clinical manifestations of hereditary Leiomyomatosis and renal cell cancer (HLRCC). Human Molecular Genetics. PMID 37561409 DOI: 10.1093/hmg/ddad131  0.772
2022 Haddad Derafshi B, Danko T, Chanda S, Batista PJ, Litzenburger U, Lee QY, Ng YH, Sebin A, Chang HY, Südhof TC, Wernig M. The autism risk factor CHD8 is a chromatin activator in human neurons and functionally dependent on the ERK-MAPK pathway effector ELK1. Scientific Reports. 12: 22425. PMID 36575212 DOI: 10.1038/s41598-022-23614-x  0.437
2022 Bailey AS, Batista PJ, Chang HY, Fuller MT. Identification of Protein-RNA Interactions in Mouse Testis Tissue Using fRIP. Bio-Protocol. 12: e4286. PMID 35118177 DOI: 10.21769/BioProtoc.4286  0.596
2021 Patel RP, Thomas JR, Curt KM, Fitzsimmons CM, Batista PJ, Bates SE, Gottesman MM, Robey RW. Dual Inhibition of Histone Deacetylases and the Mechanistic Target of Rapamycin Promotes Apoptosis in Cell Line Models of Uveal Melanoma. Investigative Ophthalmology & Visual Science. 62: 16. PMID 34533562 DOI: 10.1167/iovs.62.12.16  0.75
2021 Chan D, Fitzsimmons CM, Mandler MD, Batista PJ. Ten simple rules for acing virtual interviews. Plos Computational Biology. 17: e1009057. PMID 34166364 DOI: 10.1371/journal.pcbi.1009057  0.672
2021 Flynn RA, Pedram K, Malaker SA, Batista PJ, Smith BAH, Johnson AG, George BM, Majzoub K, Villalta PW, Carette JE, Bertozzi CR. Small RNAs are modified with N-glycans and displayed on the surface of living cells. Cell. PMID 34004145 DOI: 10.1016/j.cell.2021.04.023  0.779
2020 Lunger JC, Batista PJ. You Get a Modification, and You Get a Modification… Everyone Gets a Modification! Molecular Cell. 80: 557-559. PMID 33217314 DOI: 10.1016/j.molcel.2020.10.043  0.753
2020 Chan D, Batista PJ. RNA post-transcriptional modification speaks to chromatin. Nature Genetics. 52: 868-869. PMID 32879511 DOI: 10.1038/S41588-020-0685-3  0.814
2020 Zong D, Oberdoerffer P, Batista PJ, Nussenzweig A. RNA: a double-edged sword in genome maintenance. Nature Reviews. Genetics. PMID 32764716 DOI: 10.1038/S41576-020-0263-7  0.387
2019 Fang J, Ma Q, Chu C, Huang B, Li L, Cai P, Batista PJ, Tolentino KEM, Xu J, Li R, Du P, Qu K, Chang HY. PIRCh-seq: functional classification of non-coding RNAs associated with distinct histone modifications. Genome Biology. 20: 292. PMID 31862000 DOI: 10.1186/S13059-019-1880-3  0.604
2018 Fitzsimmons CM, Batista PJ. It's complicated… mA-dependent regulation of gene expression in cancer. Biochimica Et Biophysica Acta. Gene Regulatory Mechanisms. PMID 30296493 DOI: 10.1016/J.Bbagrm.2018.09.010  0.792
2018 Chen L, Roake CM, Freund A, Batista PJ, Tian S, Yin YA, Gajera CR, Lin S, Lee B, Pech MF, Venteicher AS, Das R, Chang HY, Artandi SE. An Activity Switch in Human Telomerase Based on RNA Conformation and Shaped by TCAB1. Cell. PMID 29804836 DOI: 10.1016/J.Cell.2018.04.039  0.573
2018 Gao Y, Vasic R, Tebaldi T, Song Y, Teng R, Joshi P, Viero G, Xiao A, Batista P, Li H, Flavell R, Halene S. Mettl3 Mediated m6A Modification Is Essential in Fetal Hematopoiesis Blood. 132: 3825-3825. DOI: 10.1182/Blood-2018-99-119699  0.384
2017 Schmiechen AC, Batista PJ. An epitranscriptomic vulnerability in myeloid malignancies. Nature Medicine. 23: 1252-1254. PMID 29117175 DOI: 10.1038/Nm.4435  0.731
2017 Bailey AS, Batista PJ, Gold RS, Chen YG, de Rooij DG, Chang HY, Fuller MT. The conserved RNA helicase YTHDC2 regulates the transition from proliferation to differentiation in the germline. Elife. 6. PMID 29087293 DOI: 10.7554/Elife.26116  0.568
2017 Li HB, Tong J, Zhu S, Batista PJ, Duffy EE, Zhao J, Bailis W, Cao G, Kroehling L, Chen Y, Wang G, Broughton JP, Chen YG, Kluger Y, Simon MD, et al. m(6)A mRNA methylation controls T cell homeostasis by targeting the IL-7/STAT5/SOCS pathways. Nature. PMID 28792938 DOI: 10.1038/Nature23450  0.5
2017 Chen YG, Kim MV, Chen X, Batista PJ, Aoyama S, Wilusz JE, Iwasaki A, Chang HY. Sensing Self and Foreign Circular RNAs by Intron Identity. Molecular Cell. PMID 28625551 DOI: 10.1016/J.Molcel.2017.05.022  0.77
2017 Batista PJ. The RNA Modification N(6)-methyladenosine and Its Implications in Human Disease. Genomics, Proteomics & Bioinformatics. PMID 28533023 DOI: 10.1016/J.Gpb.2017.03.002  0.503
2017 Bailey AS, Batista PJ, Gold RS, Chen YG, Rooij DGd, Chang HY, Fuller MT. Author response: The conserved RNA helicase YTHDC2 regulates the transition from proliferation to differentiation in the germline Elife. DOI: 10.7554/Elife.26116.050  0.553
2015 Spitale RC, Flynn RA, Zhang QC, Crisalli P, Lee B, Jung JW, Kuchelmeister HY, Batista PJ, Torre EA, Kool ET, Chang HY. Erratum: Structural imprints in vivo decode RNA regulatory mechanisms. Nature. PMID 26416736 DOI: 10.1038/Nature15717  0.731
2015 Roost C, Lynch SR, Batista PJ, Qu K, Chang HY, Kool ET. Correction to "Structure and Thermodynamics of N(6)-Methyladenosine in RNA: A Spring-Loaded Base Modification". Journal of the American Chemical Society. PMID 26087989 DOI: 10.1021/Jacs.5B05858  0.538
2015 Spitale RC, Flynn RA, Zhang QC, Crisalli P, Lee B, Jung JW, Kuchelmeister HY, Batista PJ, Torre EA, Kool ET, Chang HY. Structural imprints in vivo decode RNA regulatory mechanisms. Nature. 519: 486-90. PMID 25799993 DOI: 10.1038/Nature14263  0.787
2015 Roost C, Lynch SR, Batista PJ, Qu K, Chang HY, Kool ET. Structure and thermodynamics of N6-methyladenosine in RNA: a spring-loaded base modification. Journal of the American Chemical Society. 137: 2107-15. PMID 25611135 DOI: 10.1021/Ja513080V  0.559
2014 Batista PJ, Molinie B, Wang J, Qu K, Zhang J, Li L, Bouley DM, Lujan E, Haddad B, Daneshvar K, Carter AC, Flynn RA, Zhou C, Lim KS, Dedon P, et al. m(6)A RNA modification controls cell fate transition in mammalian embryonic stem cells. Cell Stem Cell. 15: 707-19. PMID 25456834 DOI: 10.1016/J.Stem.2014.09.019  0.538
2013 Harcourt EM, Ehrenschwender T, Batista PJ, Chang HY, Kool ET. Identification of a selective polymerase enables detection of N(6)-methyladenosine in RNA. Journal of the American Chemical Society. 135: 19079-82. PMID 24328136 DOI: 10.1021/Ja4105792  0.556
2013 Batista PJ, Chang HY. Long noncoding RNAs: cellular address codes in development and disease. Cell. 152: 1298-307. PMID 23498938 DOI: 10.1016/J.Cell.2013.02.012  0.547
2013 Batista PJ, Chang HY. Cytotopic localization by long noncoding RNAs. Current Opinion in Cell Biology. 25: 195-9. PMID 23279909 DOI: 10.1016/J.Ceb.2012.12.001  0.594
2011 Gu W, Claycomb JM, Batista PJ, Mello CC, Conte D. Cloning Argonaute-associated small RNAs from Caenorhabditis elegans. Methods in Molecular Biology (Clifton, N.J.). 725: 251-80. PMID 21528459 DOI: 10.1007/978-1-61779-046-1_17  0.8
2010 Conine CC, Batista PJ, Gu W, Claycomb JM, Chaves DA, Shirayama M, Mello CC. Argonautes ALG-3 and ALG-4 are required for spermatogenesis-specific 26G-RNAs and thermotolerant sperm in Caenorhabditis elegans. Proceedings of the National Academy of Sciences of the United States of America. 107: 3588-93. PMID 20133686 DOI: 10.1073/Pnas.0911685107  0.801
2010 Vasale JJ, Gu W, Thivierge C, Batista PJ, Claycomb JM, Youngman EM, Duchaine TF, Mello CC, Conte D. Sequential rounds of RNA-dependent RNA transcription drive endogenous small-RNA biogenesis in the ERGO-1/Argonaute pathway. Proceedings of the National Academy of Sciences of the United States of America. 107: 3582-7. PMID 20133583 DOI: 10.1073/Pnas.0911908107  0.802
2009 van Wolfswinkel JC, Claycomb JM, Batista PJ, Mello CC, Berezikov E, Ketting RF. CDE-1 affects chromosome segregation through uridylation of CSR-1-bound siRNAs. Cell. 139: 135-48. PMID 19804759 DOI: 10.1016/J.Cell.2009.09.012  0.749
2009 Claycomb JM, Batista PJ, Pang KM, Gu W, Vasale JJ, van Wolfswinkel JC, Chaves DA, Shirayama M, Mitani S, Ketting RF, Conte D, Mello CC. The Argonaute CSR-1 and its 22G-RNA cofactors are required for holocentric chromosome segregation. Cell. 139: 123-34. PMID 19804758 DOI: 10.1016/J.Cell.2009.09.014  0.785
2009 Gu W, Shirayama M, Conte D, Vasale J, Batista PJ, Claycomb JM, Moresco JJ, Youngman EM, Keys J, Stoltz MJ, Chen CC, Chaves DA, Duan S, Kasschau KD, Fahlgren N, et al. Distinct argonaute-mediated 22G-RNA pathways direct genome surveillance in the C. elegans germline. Molecular Cell. 36: 231-44. PMID 19800275 DOI: 10.1016/J.Molcel.2009.09.020  0.802
2008 Batista PJ, Ruby JG, Claycomb JM, Chiang R, Fahlgren N, Kasschau KD, Chaves DA, Gu W, Vasale JJ, Duan S, Conte D, Luo S, Schroth GP, Carrington JC, Bartel DP, et al. PRG-1 and 21U-RNAs interact to form the piRNA complex required for fertility in C. elegans. Molecular Cell. 31: 67-78. PMID 18571452 DOI: 10.1016/J.Molcel.2008.06.002  0.802
2006 Yigit E, Batista PJ, Bei Y, Pang KM, Chen CC, Tolia NH, Joshua-Tor L, Mitani S, Simard MJ, Mello CC. Analysis of the C. elegans Argonaute family reveals that distinct Argonautes act sequentially during RNAi. Cell. 127: 747-57. PMID 17110334 DOI: 10.1016/J.Cell.2006.09.033  0.662
2005 Page AR, Kovacs A, Deak P, Torok T, Kiss I, Dario P, Bastos C, Batista P, Gomes R, Ohkura H, Russell S, Glover DM. Spotted-dick, a zinc-finger protein of Drosophila required for expression of Orc4 and S phase. The Embo Journal. 24: 4304-15. PMID 16369566 DOI: 10.1038/Sj.Emboj.7600890  0.335
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