| Year |
Citation |
Score |
| 2023 |
Wang Y, Zhou JX, Pedrini E, Rubin I, Khalil M, Taramelli R, Qian H, Huang S. Cell Population Growth Kinetics in the Presence of Stochastic Heterogeneity of Cell Phenotype. Arxiv. PMID 37904742 |
0.313 |
|
| 2023 |
Wang Y, Zhou JX, Pedrini E, Rubin I, Khalil M, Taramelli R, Qian H, Huang S. Cell population growth kinetics in the presence of stochastic heterogeneity of cell phenotype. Journal of Theoretical Biology. 575: 111645. PMID 37863423 DOI: 10.1016/j.jtbi.2023.111645 |
0.313 |
|
| 2023 |
Strasser MK, Gibbs DL, Gascard P, Bons J, Hickey JW, Schürch CM, Tan Y, Black S, Chu P, Ozkan A, Basisty N, Sangwan V, Rose J, Shah S, Camilleri-Broet S, ... ... Huang S, et al. Concerted epithelial and stromal changes during progression of Barrett's Esophagus to invasive adenocarcinoma exposed by multi-scale, multi-omics analysis. Biorxiv : the Preprint Server For Biology. PMID 37333362 DOI: 10.1101/2023.06.08.544265 |
0.489 |
|
| 2023 |
Wang Y, Zhou JX, Pedrini E, Rubin I, Khalil M, Qian H, Huang S. Cell Population Growth Kinetics in the Presence of Stochastic Heterogeneity of Cell Phenotype. Biorxiv : the Preprint Server For Biology. PMID 36824755 DOI: 10.1101/2023.02.08.527773 |
0.305 |
|
| 2023 |
Rodrigues A, MacQuarrie KL, Freeman E, Lin A, Willis AB, Xu Z, Alvarez AA, Ma Y, White BEP, Foltz DR, Huang S. Nucleoli and the nucleoli-centromere association are dynamic during normal development and in cancer. Molecular Biology of the Cell. mbcE22060237. PMID 36753381 DOI: 10.1091/mbc.E22-06-0237 |
0.312 |
|
| 2020 |
Fishbein A, Wang W, Yang H, Yang J, Hallisey VM, Deng J, Verheul SML, Hwang SH, Gartung A, Wang Y, Bielenberg DR, Huang S, Kieran MW, Hammock BD, Panigrahy D. Resolution of eicosanoid/cytokine storm prevents carcinogen and inflammation-initiated hepatocellular cancer progression. Proceedings of the National Academy of Sciences of the United States of America. PMID 32801214 DOI: 10.1073/Pnas.2007412117 |
0.343 |
|
| 2019 |
Johnson KE, Howard G, Mo W, Strasser MK, Lima EABF, Huang S, Brock A. Cancer cell population growth kinetics at low densities deviate from the exponential growth model and suggest an Allee effect. Plos Biology. 17: e3000399. PMID 31381560 DOI: 10.1371/Journal.Pbio.3000399 |
0.734 |
|
| 2019 |
Kaipainen A, Chen E, Chang L, Zhao B, Shin H, Stahl A, Fishman SJ, Mulliken JB, Folkman J, Huang S, Fannon M. Characterization of lymphatic malformations using primary cells and tissue transcriptomes. Scandinavian Journal of Immunology. e12800. PMID 31241785 DOI: 10.1111/Sji.12800 |
0.393 |
|
| 2019 |
Panigrahy D, Gartung A, Yang J, Yang H, Gilligan MM, Sulciner ML, Bhasin SS, Bielenberg DR, Chang J, Schmidt BA, Piwowarski J, Fishbein A, Soler-Ferran D, Sparks MA, Staffa SJ, ... ... Huang S, et al. Preoperative stimulation of resolution and inflammation blockade eradicates micrometastases. The Journal of Clinical Investigation. 130. PMID 31205032 DOI: 10.1172/Jci127282 |
0.302 |
|
| 2019 |
Gilligan MM, Gartung A, Sulciner ML, Norris PC, Sukhatme VP, Bielenberg DR, Huang S, Kieran MW, Serhan CN, Panigrahy D. Aspirin-triggered proresolving mediators stimulate resolution in cancer. Proceedings of the National Academy of Sciences of the United States of America. PMID 30862734 DOI: 10.1073/Pnas.1804000116 |
0.349 |
|
| 2019 |
Gartung A, Yang J, Sukhatme VP, Bielenberg DR, Fernandes D, Chang J, Schmidt BA, Hwang SH, Zurakowski D, Huang S, Kieran MW, Hammock BD, Panigrahy D. Suppression of chemotherapy-induced cytokine/lipid mediator surge and ovarian cancer by a dual COX-2/sEH inhibitor. Proceedings of the National Academy of Sciences of the United States of America. PMID 30647111 DOI: 10.1073/Pnas.1803999116 |
0.328 |
|
| 2018 |
Zhou JX, Taramelli R, Pedrini E, Knijnenburg T, Huang S. Author Correction: Extracting Intercellular Signaling Network of Cancer Tissues using Ligand-Receptor Expression Patterns from Whole-tumor and Single-cell Transcriptomes. Scientific Reports. 8: 17903. PMID 30538266 DOI: 10.1038/S41598-018-36408-X |
0.338 |
|
| 2018 |
Joo JI, Zhou JX, Huang S, Cho KH. Determining Relative Dynamic Stability of Cell States Using Boolean Network Model. Scientific Reports. 8: 12077. PMID 30104572 DOI: 10.1038/S41598-018-30544-0 |
0.405 |
|
| 2018 |
Chang J, Bhasin SS, Bielenberg DR, Sukhatme VP, Bhasin M, Huang S, Kieran MW, Panigrahy D. Chemotherapy-generated cell debris stimulates colon carcinoma tumor growth via osteopontin. Faseb Journal : Official Publication of the Federation of American Societies For Experimental Biology. fj201800019RR. PMID 29957058 DOI: 10.1096/Fj.201800019Rr |
0.379 |
|
| 2018 |
Grosse-Wilde A, Kuestner RE, Skelton SM, MacIntosh E, d'Hérouël AF, Ertaylan G, Del Sol A, Skupin A, Huang S. Loss of inter-cellular cooperation by complete epithelial-mesenchymal transition supports favorable outcomes in basal breast cancer patients. Oncotarget. 9: 20018-20033. PMID 29732000 DOI: 10.18632/Oncotarget.25034 |
0.37 |
|
| 2017 |
Sulciner ML, Serhan CN, Gilligan MM, Mudge DK, Chang J, Gartung A, Lehner KA, Bielenberg DR, Schmidt B, Dalli J, Greene ER, Gus-Brautbar Y, Piwowarski J, Mammoto T, Zurakowski D, ... ... Huang S, et al. Resolvins suppress tumor growth and enhance cancer therapy. The Journal of Experimental Medicine. PMID 29191914 DOI: 10.1084/Jem.20170681 |
0.363 |
|
| 2017 |
Brock A, Huang S. Precision Oncology: Between Vaguely Right and Precisely Wrong. Cancer Research. PMID 29162615 DOI: 10.1158/0008-5472.Can-17-0448 |
0.64 |
|
| 2017 |
Liu X, Sun L, Gursel DB, Cheng C, Huang S, Rademaker AW, Khan SA, Yin J, Kiyokawa H. The non-canonical ubiquitin activating enzyme UBA6 suppresses epithelial-mesenchymal transition of mammary epithelial cells. Oncotarget. 8: 87480-87493. PMID 29152096 DOI: 10.18632/Oncotarget.20900 |
0.302 |
|
| 2017 |
Yuan R, Zhang S, Yu J, Huang Y, Lu D, Cheng R, Huang S, Ao P, Zheng S, Hood L, Zhu X. Beyond cancer genes: colorectal cancer as robust intrinsic states formed by molecular interactions. Open Biology. 7. PMID 29118272 DOI: 10.1098/Rsob.170169 |
0.357 |
|
| 2017 |
Zhou JX, Taramelli R, Pedrini E, Knijnenburg T, Huang S. Extracting Intercellular Signaling Network of Cancer Tissues using Ligand-Receptor Expression Patterns from Whole-tumor and Single-cell Transcriptomes. Scientific Reports. 7: 8815. PMID 28821810 DOI: 10.1038/S41598-017-09307-W |
0.442 |
|
| 2017 |
Huang S, Li F, Zhou JX, Qian H. Processes on the emergent landscapes of biochemical reaction networks and heterogeneous cell population dynamics: differentiation in living matters. Journal of the Royal Society, Interface. 14. PMID 28490602 DOI: 10.1098/Rsif.2017.0097 |
0.397 |
|
| 2017 |
Bargaje R, Trachana K, Shelton MN, McGinnis CS, Zhou JX, Chadick C, Cook S, Cavanaugh C, Huang S, Hood L. Cell population structure prior to bifurcation predicts efficiency of directed differentiation in human induced pluripotent cells. Proceedings of the National Academy of Sciences of the United States of America. PMID 28167799 DOI: 10.1073/Pnas.1621412114 |
0.445 |
|
| 2016 |
Mojtahedi M, Skupin A, Zhou J, Castaño IG, Leong-Quong RY, Chang H, Trachana K, Giuliani A, Huang S. Cell Fate Decision as High-Dimensional Critical State Transition. Plos Biology. 14: e2000640. PMID 28027308 DOI: 10.1371/Journal.Pbio.2000640 |
0.442 |
|
| 2016 |
Vazquez-Martin A, Anatskaya OV, Giuliani A, Erenpreisa J, Huang S, Salmina K, Inashkina I, Huna A, Nikolsky NN, Vinogradov AE. Somatic polyploidy is associated with the upregulation of c-MYC interacting genes and EMT-like signature. Oncotarget. PMID 27655693 DOI: 10.18632/Oncotarget.12118 |
0.365 |
|
| 2016 |
Marr C, Zhou JX, Huang S. Single-cell gene expression profiling and cell state dynamics: collecting data, correlating data points and connecting the dots. Current Opinion in Biotechnology. 39: 207-214. PMID 27152696 DOI: 10.1016/J.Copbio.2016.04.015 |
0.423 |
|
| 2016 |
Zhou JX, Samal A, 'Hérouël AF, Price ND, Huang S. Relative Stability of Network States in Boolean Network Models of Gene Regulation in Development. Bio Systems. PMID 26965665 DOI: 10.1016/J.Biosystems.2016.03.002 |
0.399 |
|
| 2016 |
Li Q, Wennborg A, Aurell E, Dekel E, Zou JZ, Xu Y, Huang S, Ernberg I. Dynamics inside the cancer cell attractor reveal cell heterogeneity, limits of stability, and escape. Proceedings of the National Academy of Sciences of the United States of America. PMID 26929366 DOI: 10.1073/Pnas.1519210113 |
0.47 |
|
| 2016 |
Zhou JX, Isik Z, Xiao C, Rubin I, Kauffman SA, Schroeder M, Huang S. Systematic drug perturbations on cancer cells reveal diverse exit paths from proliferative state. Oncotarget. PMID 26871731 DOI: 10.18632/Oncotarget.7294 |
0.405 |
|
| 2016 |
Gilligan MM, Sulciner ML, Gus-Brautbar Y, Ramon S, Colas RA, Huang S, Serhan CN, Panigrahy D. Abstract 766: Control of lung cancer with aspirin-triggered stimulation of resolution Cancer Research. 76: 766-766. DOI: 10.1158/1538-7445.Am2016-766 |
0.338 |
|
| 2015 |
Grosse-Wilde A, Fouquier d'Hérouël A, McIntosh E, Ertaylan G, Skupin A, Kuestner RE, Del Sol A, Walters KA, Huang S. Stemness of the hybrid Epithelial/Mesenchymal State in Breast Cancer and Its Association with Poor Survival. Plos One. 10: e0126522. PMID 26020648 DOI: 10.1371/Journal.Pone.0126522 |
0.343 |
|
| 2015 |
Gilligan M, Sulciner M, Ramon S, Colas R, Huang S, Serhan C, Panigrahy D. Control of Lung Cancer with Aspirin-Triggered Stimulation of Resolution The Faseb Journal. 29. DOI: 10.1096/Fasebj.29.1_Supplement.54.6 |
0.308 |
|
| 2014 |
Zhou JX, Pisco AO, Qian H, Huang S. Nonequilibrium population dynamics of phenotype conversion of cancer cells. Plos One. 9: e110714. PMID 25438251 DOI: 10.1371/Journal.Pone.0110714 |
0.423 |
|
| 2014 |
Pisco AO, Jackson DA, Huang S. Reduced Intracellular Drug Accumulation in Drug-Resistant Leukemia Cells is Not Only Solely Due to MDR-Mediated Efflux but also to Decreased Uptake. Frontiers in Oncology. 4: 306. PMID 25401091 DOI: 10.3389/Fonc.2014.00306 |
0.308 |
|
| 2014 |
Grosse-Wilde A, d'Herouel A, Kuestner R, Ertaylan G, Skupin A, Huang S, Ozinsky A. Abstract 1918: Synergy between epithelial and mesenchymal cells in breast cancer: from mammospheres to predicting patient outcomes Cancer Research. 74: 1918-1918. DOI: 10.1158/1538-7445.Am2014-1918 |
0.432 |
|
| 2014 |
Sulciner ML, Mudge DK, Bielenberg DR, Benny O, Dalli J, Huang S, Serhan CN, Kieran MW, Panigrahy D. Abstract 1664: Cancer progression: The failure to resolve Cancer Research. 74: 1664-1664. DOI: 10.1158/1538-7445.Am2014-1664 |
0.347 |
|
| 2014 |
Mudge D, Kieran MW, Bielenberg D, Benny O, Dalli J, Huang S, Serhan CN, Panigrahy D. Abstract 1170: Maresin 1: a potent endogenous anti-inflammatory and pro-resolving inhibitor of primary tumor growth and metastasis Cancer Research. 74: 1170-1170. DOI: 10.1158/1538-7445.Am2014-1170 |
0.322 |
|
| 2013 |
Pisco AO, Brock A, Zhou J, Moor A, Mojtahedi M, Jackson D, Huang S. Non-Darwinian dynamics in therapy-induced cancer drug resistance. Nature Communications. 4: 2467. PMID 24045430 DOI: 10.1038/Ncomms3467 |
0.622 |
|
| 2013 |
Panigrahy D, Kalish BT, Huang S, Bielenberg DR, Le HD, Yang J, Edin ML, Lee CR, Benny O, Mudge DK, Butterfield CE, Mammoto A, Mammoto T, Inceoglu B, Jenkins RL, et al. Epoxyeicosanoids promote organ and tissue regeneration. Proceedings of the National Academy of Sciences of the United States of America. 110: 13528-33. PMID 23898174 DOI: 10.1073/Pnas.1311565110 |
0.492 |
|
| 2013 |
Huang S, Kauffman S. How to escape the cancer attractor: rationale and limitations of multi-target drugs. Seminars in Cancer Biology. 23: 270-8. PMID 23792873 DOI: 10.1016/J.Semcancer.2013.06.003 |
0.397 |
|
| 2013 |
Heinäniemi M, Nykter M, Kramer R, Wienecke-Baldacchino A, Sinkkonen L, Zhou JX, Kreisberg R, Kauffman SA, Huang S, Shmulevich I. Gene-pair expression signatures reveal lineage control. Nature Methods. 10: 577-83. PMID 23603899 DOI: 10.1038/Nmeth.2445 |
0.406 |
|
| 2012 |
Zhou JX, Aliyu DSM, Aurell E, Huang S. Quasi-potential landscape in complex multi-stable systems Journal of the Royal Society Interface. 9: 3539-3553. PMID 22933187 DOI: 10.1098/Rsif.2012.0434 |
0.32 |
|
| 2012 |
Panigrahy D, Edin ML, Lee CR, Huang S, Bielenberg DR, Butterfield CE, Barnés CM, Mammoto A, Mammoto T, Luria A, Benny O, Chaponis DM, Dudley AC, Greene ER, Vergilio JA, et al. Epoxyeicosanoids stimulate multiorgan metastasis and tumor dormancy escape in mice. The Journal of Clinical Investigation. 122: 178-91. PMID 22182838 DOI: 10.1172/Jci58128 |
0.53 |
|
| 2012 |
Halley JD, Smith-Miles KA, Winkler DA, Kalkan T, Huang S, Smith A. Self-organizing circuitry and emergent computation in mouse embryonic stem cells Stem Cell Research. 8: 324-333. PMID 22169460 DOI: 10.1016/J.Scr.2011.11.001 |
0.383 |
|
| 2011 |
Greene ER, Huang S, Serhan CN, Panigrahy D. Regulation of inflammation in cancer by eicosanoids. Prostaglandins & Other Lipid Mediators. 96: 27-36. PMID 21864702 DOI: 10.1016/J.Prostaglandins.2011.08.004 |
0.313 |
|
| 2011 |
Huang S. Systems biology of stem cells: three useful perspectives to help overcome the paradigm of linear pathways. Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences. 366: 2247-59. PMID 21727130 DOI: 10.1098/Rstb.2011.0008 |
0.392 |
|
| 2011 |
Huang S. On the intrinsic inevitability of cancer: from foetal to fatal attraction. Seminars in Cancer Biology. 21: 183-99. PMID 21640825 DOI: 10.1016/J.Semcancer.2011.05.003 |
0.364 |
|
| 2011 |
Andrecut M, Halley JD, Winkler DA, Huang S. A general model for binary cell fate decision gene circuits with degeneracy: indeterminacy and switch behavior in the absence of cooperativity. Plos One. 6: e19358. PMID 21625586 DOI: 10.1371/Journal.Pone.0019358 |
0.409 |
|
| 2011 |
Guo Y, Feng Y, Trivedi NS, Huang S. Medusa structure of the gene regulatory network: dominance of transcription factors in cancer subtype classification. Experimental Biology and Medicine (Maywood, N.J.). 236: 628-36. PMID 21540249 DOI: 10.1258/Ebm.2011.010324 |
0.328 |
|
| 2011 |
Zhou JX, Brusch L, Huang S. Predicting pancreas cell fate decisions and reprogramming with a hierarchical multi-attractor model. Plos One. 6: e14752. PMID 21423725 DOI: 10.1371/Journal.Pone.0014752 |
0.399 |
|
| 2011 |
Zhou JX, Huang S. Understanding gene circuits at cell-fate branch points for rational cell reprogramming. Trends in Genetics : Tig. 27: 55-62. PMID 21146896 DOI: 10.1016/J.Tig.2010.11.002 |
0.42 |
|
| 2010 |
Wang J, Xu L, Wang E, Huang S. The potential landscape of genetic circuits imposes the arrow of time in stem cell differentiation. Biophysical Journal. 99: 29-39. PMID 20655830 DOI: 10.1016/J.Bpj.2010.03.058 |
0.387 |
|
| 2010 |
Huang S. Cell lineage determination in state space: a systems view brings flexibility to dogmatic canonical rules. Plos Biology. 8: e1000380. PMID 20520792 DOI: 10.1371/Journal.Pbio.1000380 |
0.31 |
|
| 2010 |
Bracha AL, Ramanathan A, Huang S, Ingber DE, Schreiber SL. Carbon metabolism-mediated myogenic differentiation. Nature Chemical Biology. 6: 202-204. PMID 20081855 DOI: 10.1038/Nchembio.301 |
0.469 |
|
| 2009 |
Huang S. Non-genetic heterogeneity of cells in development: more than just noise. Development (Cambridge, England). 136: 3853-62. PMID 19906852 DOI: 10.1242/Dev.035139 |
0.421 |
|
| 2009 |
Foster DV, Foster JG, Huang S, Kauffman SA. A model of sequential branching in hierarchical cell fate determination. Journal of Theoretical Biology. 260: 589-97. PMID 19615382 DOI: 10.1016/J.Jtbi.2009.07.005 |
0.44 |
|
| 2009 |
Huang S, Ernberg I, Kauffman S. Cancer attractors: A systems view of tumors from a gene network dynamics and developmental perspective Seminars in Cell and Developmental Biology. 20: 869-876. PMID 19595782 DOI: 10.1016/J.Semcdb.2009.07.003 |
0.417 |
|
| 2009 |
Brock A, Chang H, Huang S. Non-genetic heterogeneity--a mutation-independent driving force for the somatic evolution of tumours. Nature Reviews. Genetics. 10: 336-42. PMID 19337290 DOI: 10.1038/Nrg2556 |
0.641 |
|
| 2009 |
Huang S. Reprogramming cell fates: reconciling rarity with robustness. Bioessays : News and Reviews in Molecular, Cellular and Developmental Biology. 31: 546-60. PMID 19319911 DOI: 10.1002/Bies.200800189 |
0.431 |
|
| 2008 |
Panigrahy D, Kaipainen A, Kieran MW, Huang S. PPARs: A Double-Edged Sword in Cancer Therapy? Ppar Research. 2008: 350351. PMID 19590598 DOI: 10.1155/2008/350351 |
0.345 |
|
| 2008 |
Andrecut M, Huang S, Kauffman SA. Heuristic approach to sparse approximation of gene regulatory networks. Journal of Computational Biology : a Journal of Computational Molecular Cell Biology. 15: 1173-86. PMID 18844584 DOI: 10.1089/Cmb.2008.0087 |
0.311 |
|
| 2008 |
Hoffmann M, Chang HH, Huang S, Ingber DE, Loeffler M, Galle J. Noise-driven stem cell and progenitor population dynamics. Plos One. 3: e2922. PMID 18698344 DOI: 10.1371/Journal.Pone.0002922 |
0.534 |
|
| 2008 |
Wang C, Norton JT, Ghosh S, Kim J, Fushimi K, Wu JY, Stack MS, Huang S. Polypyrimidine tract-binding protein (PTB) differentially affects malignancy in a cell line-dependent manner. The Journal of Biological Chemistry. 283: 20277-87. PMID 18499661 DOI: 10.1074/Jbc.M803682200 |
0.329 |
|
| 2008 |
Chang HH, Hemberg M, Barahona M, Ingber DE, Huang S. Transcriptome-wide noise controls lineage choice in mammalian progenitor cells. Nature. 453: 544-7. PMID 18497826 DOI: 10.1038/Nature06965 |
0.587 |
|
| 2008 |
Panigrahy D, Kaipainen A, Huang S, Butterfield CE, Barnés CM, Fannon M, Laforme AM, Chaponis DM, Folkman J, Kieran MW. PPARalpha agonist fenofibrate suppresses tumor growth through direct and indirect angiogenesis inhibition. Proceedings of the National Academy of Sciences of the United States of America. 105: 985-90. PMID 18199835 DOI: 10.1073/Pnas.0711281105 |
0.363 |
|
| 2007 |
Pietramaggiori G, Liu P, Scherer SS, Kaipainen A, Prsa MJ, Mayer H, Newalder J, Alperovich M, Mentzer SJ, Konerding MA, Huang S, Ingber DE, Orgill DP. Tensile forces stimulate vascular remodeling and epidermal cell proliferation in living skin. Annals of Surgery. 246: 896-902. PMID 17968184 DOI: 10.1097/Sla.0B013E3180Caa47F |
0.506 |
|
| 2007 |
de Bivort B, Huang S, Bar-Yam Y. Empirical multiscale networks of cellular regulation. Plos Computational Biology. 3: 1968-78. PMID 17953478 DOI: 10.1371/Journal.Pcbi.0030207 |
0.387 |
|
| 2007 |
Soneji S, Huang S, Loose M, Donaldson IJ, Patient R, Göttgens B, Enver T, May G. Inference, validation, and dynamic modeling of transcription networks in multipotent hematopoietic cells. Annals of the New York Academy of Sciences. 1106: 30-40. PMID 17442775 DOI: 10.1196/Annals.1392.018 |
0.406 |
|
| 2007 |
Huang S, Guo YP, May G, Enver T. Bifurcation dynamics in lineage-commitment in bipotent progenitor cells. Developmental Biology. 305: 695-713. PMID 17412320 DOI: 10.1016/J.Ydbio.2007.02.036 |
0.403 |
|
| 2007 |
Kaipainen A, Kieran MW, Huang S, Butterfield C, Bielenberg D, Mostoslavsky G, Mulligan R, Folkman J, Panigrahy D. PPARalpha deficiency in inflammatory cells suppresses tumor growth. Plos One. 2: e260. PMID 17327920 DOI: 10.1371/Journal.Pone.0000260 |
0.33 |
|
| 2007 |
Mammoto A, Huang S, Ingber DE. Filamin links cell shape and cytoskeletal structure to Rho regulation by controlling accumulation of p190RhoGAP in lipid rafts. Journal of Cell Science. 120: 456-67. PMID 17227794 DOI: 10.1242/Jcs.03353 |
0.571 |
|
| 2007 |
Joy MP, Ingber DE, Huang S. Chaotic mean field dynamics of a Boolean network with random connectivity International Journal of Modern Physics C. 18: 1459-1473. DOI: 10.1142/S0129183107011467 |
0.474 |
|
| 2006 |
Guo Y, Eichler GS, Feng Y, Ingber DE, Huang S. Towards a holistic, yet gene-centered analysis of gene expression profiles: a case study of human lung cancers. Journal of Biomedicine & Biotechnology. 2006: 69141. PMID 17489018 DOI: 10.1155/Jbb/2006/69141 |
0.529 |
|
| 2006 |
Huang S, Ingber DE. A non-genetic basis for cancer progression and metastasis: self-organizing attractors in cell regulatory networks. Breast Disease. 26: 27-54. PMID 17473364 DOI: 10.3233/Bd-2007-26104 |
0.58 |
|
| 2006 |
Chang HH, Oh PY, Ingber DE, Huang S. Multistable and multistep dynamics in neutrophil differentiation. Bmc Cell Biology. 7: 11. PMID 16507101 DOI: 10.1186/1471-2121-7-11 |
0.585 |
|
| 2005 |
Barnés CM, Huang S, Kaipainen A, Sanoudou D, Chen EJ, Eichler GS, Guo Y, Yu Y, Ingber DE, Mulliken JB, Beggs AH, Folkman J, Fishman SJ. Evidence by molecular profiling for a placental origin of infantile hemangioma. Proceedings of the National Academy of Sciences of the United States of America. 102: 19097-102. PMID 16365311 DOI: 10.1073/Pnas.0509579102 |
0.532 |
|
| 2005 |
Huang S, Ingber DE. Cell tension, matrix mechanics, and cancer development. Cancer Cell. 8: 175-6. PMID 16169461 DOI: 10.1016/J.Ccr.2005.08.009 |
0.533 |
|
| 2005 |
Panigrahy D, Huang S, Kieran MW, Kaipainen A. PPARgamma as a therapeutic target for tumor angiogenesis and metastasis. Cancer Biology & Therapy. 4: 687-93. PMID 16082179 DOI: 10.4161/Cbt.4.7.2014 |
0.352 |
|
| 2005 |
Joy MP, Brock A, Ingber DE, Huang S. High-betweenness proteins in the yeast protein interaction network. Journal of Biomedicine & Biotechnology. 2005: 96-103. PMID 16046814 DOI: 10.1155/Jbb.2005.96 |
0.659 |
|
| 2005 |
Huang S, Brangwynne CP, Parker KK, Ingber DE. Symmetry-breaking in mammalian cell cohort migration during tissue pattern formation: role of random-walk persistence. Cell Motility and the Cytoskeleton. 61: 201-13. PMID 15986404 DOI: 10.1002/Cm.20077 |
0.589 |
|
| 2005 |
Huang S, Eichler G, Bar-Yam Y, Ingber DE. Cell fates as high-dimensional attractor states of a complex gene regulatory network. Physical Review Letters. 94: 128701. PMID 15903968 DOI: 10.1103/Physrevlett.94.128701 |
0.573 |
|
| 2005 |
Moore KA, Polte T, Huang S, Shi B, Alsberg E, Sunday ME, Ingber DE. Control of basement membrane remodeling and epithelial branching morphogenesis in embryonic lung by Rho and cytoskeletal tension. Developmental Dynamics : An Official Publication of the American Association of Anatomists. 232: 268-81. PMID 15614768 DOI: 10.1002/Dvdy.20237 |
0.526 |
|
| 2005 |
Enver T, Huang S. Mathematical modeling of transcriptional regulatory circuits defines cell fate attractors and predicts the genome-scale behaviour of haemopoietic progenitor cells undergoing a binary cell fate decision. Blood. 106: 4219-4219. DOI: 10.1182/Blood.V106.11.4219.4219 |
0.397 |
|
| 2004 |
de Bivort B, Huang S, Bar-Yam Y. Dynamics of cellular level function and regulation derived from murine expression array data. Proceedings of the National Academy of Sciences of the United States of America. 101: 17687-92. PMID 15598744 DOI: 10.1073/Pnas.0406707102 |
0.356 |
|
| 2004 |
Saxena V, Hwang CW, Huang S, Eichbaum Q, Ingber D, Orgill DP. Vacuum-assisted closure: microdeformations of wounds and cell proliferation. Plastic and Reconstructive Surgery. 114: 1086-96; discussion . PMID 15457017 DOI: 10.1097/01.Prs.0000135330.51408.97 |
0.502 |
|
| 2004 |
Mammoto A, Huang S, Moore K, Oh P, Ingber DE. Role of RhoA, mDia, and ROCK in cell shape-dependent control of the Skp2-p27kip1 pathway and the G1/S transition. The Journal of Biological Chemistry. 279: 26323-30. PMID 15096506 DOI: 10.1074/Jbc.M402725200 |
0.588 |
|
| 2004 |
Zhu H, Huang S, Dhar P. The next step in systems biology: simulating the temporospatial dynamics of molecular network. Bioessays. 26: 68-72. PMID 14696042 DOI: 10.1002/Bies.10383 |
0.325 |
|
| 2003 |
Eichler GS, Huang S, Ingber DE. Gene Expression Dynamics Inspector (GEDI): for integrative analysis of expression profiles. Bioinformatics (Oxford, England). 19: 2321-2. PMID 14630665 DOI: 10.1093/Bioinformatics/Btg307 |
0.481 |
|
| 2003 |
Numaguchi Y, Huang S, Polte TR, Eichler GS, Wang N, Ingber DE. Caldesmon-dependent switching between capillary endothelial cell growth and apoptosis through modulation of cell shape and contractility. Angiogenesis. 6: 55-64. PMID 14517405 DOI: 10.1023/A:1025821517679 |
0.581 |
|
| 2003 |
Brock A, Huang S, Ingber DE. Identification of a distinct class of cytoskeleton-associated mRNAs using microarray technology. Bmc Cell Biology. 4: 6. PMID 12848903 DOI: 10.1186/1471-2121-4-6 |
0.694 |
|
| 2003 |
Numaguchi Y, Huang S, Ingber DE. Caldesmon regulates apoptosis and cell cycle progression in capillary endothelial cells and inhibits angiogenesis in vitro Journal of the American College of Cardiology. 41: 297. DOI: 10.1016/S0735-1097(03)82391-4 |
0.541 |
|
| 2002 |
Moore KA, Huang S, Kong Y, Sunday ME, Ingber DE. Control of embryonic lung branching morphogenesis by the Rho activator, cytotoxic necrotizing factor 1. The Journal of Surgical Research. 104: 95-100. PMID 12020126 DOI: 10.1006/Jsre.2002.6418 |
0.499 |
|
| 2002 |
Huang S, Ingber DE. A discrete cell cycle checkpoint in late G(1) that is cytoskeleton-dependent and MAP kinase (Erk)-independent. Experimental Cell Research. 275: 255-64. PMID 11969294 DOI: 10.1006/Excr.2002.5504 |
0.513 |
|
| 2002 |
Brock A, Huang S. A novel trap for dynamic protein interactions in cytokine signaling. Trends in Biotechnology. 20: 145. PMID 11906744 DOI: 10.1016/S0167-7799(02)01959-5 |
0.601 |
|
| 2002 |
Brock A, Huang S. A bright new tool lights up promoters Trends in Biotechnology. 20: 490. DOI: 10.1016/S0167-7799(02)02099-1 |
0.611 |
|
| 2001 |
Brock A, Huang S. Proteomics in context Trends in Biotechnology. 19: 435. DOI: 10.1016/S0167-7799(01)01863-7 |
0.636 |
|
| 2000 |
Brangwynne C, Huang S, Parker KK, Ingber DE, Ostuni E. Symmetry breaking in cultured mammalian cells. In Vitro Cellular & Developmental Biology. Animal. 36: 563-5. PMID 11212140 DOI: 10.1007/Bf02577523 |
0.503 |
|
| 2000 |
Huang S, Ingber DE. Shape-dependent control of cell growth, differentiation, and apoptosis: switching between attractors in cell regulatory networks. Experimental Cell Research. 261: 91-103. PMID 11082279 DOI: 10.1006/Excr.2000.5044 |
0.614 |
|
| 2000 |
Chiu DT, Jeon NL, Huang S, Kane RS, Wargo CJ, Choi IS, Ingber DE, Whitesides GM. Patterned deposition of cells and proteins onto surfaces by using three-dimensional microfluidic systems. Proceedings of the National Academy of Sciences of the United States of America. 97: 2408-13. PMID 10681460 DOI: 10.1073/Pnas.040562297 |
0.516 |
|
| 1999 |
Huang S, Ingber DE. The structural and mechanical complexity of cell-growth control. Nature Cell Biology. 1: E131-8. PMID 10559956 DOI: 10.1038/13043 |
0.595 |
|
| 1999 |
Huang S. Gene expression profiling, genetic networks, and cellular states: an integrating concept for tumorigenesis and drug discovery Journal of Molecular Medicine. 77: 469-480. PMID 10475062 DOI: 10.1007/S001099900023 |
0.346 |
|
| 1998 |
Huang S, Chen CS, Ingber DE. Control of cyclin D1, p27(Kip1), and cell cycle progression in human capillary endothelial cells by cell shape and cytoskeletal tension. Molecular Biology of the Cell. 9: 3179-93. PMID 9802905 DOI: 10.1091/Mbc.9.11.3179 |
0.599 |
|
| 1998 |
Chen CS, Mrksich M, Huang S, Whitesides GM, Ingber DE. Micropatterned surfaces for control of cell shape, position, and function. Biotechnology Progress. 14: 356-63. PMID 9622515 DOI: 10.1021/Bp980031M |
0.58 |
|
| 1997 |
Chen CS, Mrksich M, Huang S, Whitesides GM, Ingber DE. Geometric control of cell life and death. Science (New York, N.Y.). 276: 1425-8. PMID 9162012 DOI: 10.1126/Science.276.5317.1425 |
0.576 |
|
| Show low-probability matches. |