| Year |
Citation |
Score |
| 2008 |
Wills NM, O'Connor M, Nelson CC, Rettberg CC, Huang WM, Gesteland RF, Atkins JF. Translational bypassing without peptidyl-tRNA anticodon scanning of coding gap mRNA. The Embo Journal. 27: 2533-44. PMID 18772887 DOI: 10.1038/Emboj.2008.170 |
0.465 |
|
| 2006 |
Ivanov IP, Gesteland RF, Atkins JF. Evolutionary specialization of recoding: frameshifting in the expression of S. cerevisiae antizyme mRNA is via an atypical antizyme shift site but is still +1. Rna (New York, N.Y.). 12: 332-7. PMID 16431984 DOI: 10.1261/Rna.2245906 |
0.417 |
|
| 2006 |
Wills NM, Moore B, Hammer A, Gesteland RF, Atkins JF. A functional -1 ribosomal frameshift signal in the human paraneoplastic Ma3 gene. The Journal of Biological Chemistry. 281: 7082-8. PMID 16407312 DOI: 10.1074/Jbc.M511629200 |
0.417 |
|
| 2006 |
Atkins JF, Gesteland RF, Jackson RJ, Wills NM. 16 The Shapely mRNA: Knotting Ventured, Knotting Gained Cold Spring Harbor Monograph Archive. 43: 437-467. DOI: 10.1101/087969739.43.437 |
0.333 |
|
| 2005 |
Petros LM, Howard MT, Gesteland RF, Atkins JF. Polyamine sensing during antizyme mRNA programmed frameshifting. Biochemical and Biophysical Research Communications. 338: 1478-89. PMID 16269132 DOI: 10.1016/J.Bbrc.2005.10.115 |
0.423 |
|
| 2005 |
Gurvich OL, Baranov PV, Gesteland RF, Atkins JF. Expression levels influence ribosomal frameshifting at the tandem rare arginine codons AGG_AGG and AGA_AGA in Escherichia coli. Journal of Bacteriology. 187: 4023-32. PMID 15937165 DOI: 10.1128/Jb.187.12.4023-4032.2005 |
0.422 |
|
| 2005 |
Baranov PV, Hammer AW, Zhou J, Gesteland RF, Atkins JF. Transcriptional slippage in bacteria: distribution in sequenced genomes and utilization in IS element gene expression. Genome Biology. 6: R25. PMID 15774026 DOI: 10.1186/Gb-2005-6-3-R25 |
0.423 |
|
| 2005 |
Baranov PV, Henderson CM, Anderson CB, Gesteland RF, Atkins JF, Howard MT. Programmed ribosomal frameshifting in decoding the SARS-CoV genome. Virology. 332: 498-510. PMID 15680415 DOI: 10.1016/J.Virol.2004.11.038 |
0.404 |
|
| 2005 |
Bucklin DJ, Wills NM, Gesteland RF, Atkins JF. P-site pairing subtleties revealed by the effects of different tRNAs on programmed translational bypassing where anticodon re-pairing to mRNA is separated from dissociation. Journal of Molecular Biology. 345: 39-49. PMID 15567409 DOI: 10.1016/J.Jmb.2004.10.037 |
0.419 |
|
| 2004 |
Howard MT, Gesteland RF, Atkins JF. Efficient stimulation of site-specific ribosome frameshifting by antisense oligonucleotides. Rna (New York, N.Y.). 10: 1653-61. PMID 15383681 DOI: 10.1261/Rna.7810204 |
0.441 |
|
| 2004 |
Ivanov IP, Anderson CB, Gesteland RF, Atkins JF. Identification of a new antizyme mRNA +1 frameshifting stimulatory pseudoknot in a subset of diverse invertebrates and its apparent absence in intermediate species. Journal of Molecular Biology. 339: 495-504. PMID 15147837 DOI: 10.1016/J.Jmb.2004.03.082 |
0.409 |
|
| 2004 |
Mejlhede N, Licznar P, Prère MF, Wills NM, Gesteland RF, Atkins JF, Fayet O. -1 frameshifting at a CGA AAG hexanucleotide site is required for transposition of insertion sequence IS1222. Journal of Bacteriology. 186: 3274-7. PMID 15126494 DOI: 10.1128/Jb.186.10.3274-3277.2004 |
0.36 |
|
| 2004 |
Matveeva OV, Foley BT, Nemtsov VA, Gesteland RF, Matsufuji S, Atkins JF, Ogurtsov AY, Shabalina SA. Identification of regions in multiple sequence alignments thermodynamically suitable for targeting by consensus oligonucleotides: application to HIV genome. Bmc Bioinformatics. 5: 44. PMID 15115544 DOI: 10.1186/1471-2105-5-44 |
0.33 |
|
| 2004 |
Baranov PV, Gesteland RF, Atkins JF. P-site tRNA is a crucial initiator of ribosomal frameshifting. Rna (New York, N.Y.). 10: 221-30. PMID 14730021 DOI: 10.1261/Rna.5122604 |
0.381 |
|
| 2004 |
Herr AJ, Wills NM, Nelson CC, Gesteland RF, Atkins JF. Factors that influence selection of coding resumption sites in translational bypassing: minimal conventional peptidyl-tRNA:mRNA pairing can suffice. The Journal of Biological Chemistry. 279: 11081-7. PMID 14707145 DOI: 10.1074/Jbc.M311491200 |
0.414 |
|
| 2003 |
Gurvich OL, Baranov PV, Zhou J, Hammer AW, Gesteland RF, Atkins JF. Sequences that direct significant levels of frameshifting are frequent in coding regions of Escherichia coli. The Embo Journal. 22: 5941-50. PMID 14592990 DOI: 10.1093/Emboj/Cdg561 |
0.423 |
|
| 2003 |
Licznar P, Mejlhede N, Prère MF, Wills N, Gesteland RF, Atkins JF, Fayet O. Programmed translational -1 frameshifting on hexanucleotide motifs and the wobble properties of tRNAs. The Embo Journal. 22: 4770-8. PMID 12970189 DOI: 10.1093/Emboj/Cdg465 |
0.428 |
|
| 2003 |
Matveeva OV, Mathews DH, Tsodikov AD, Shabalina SA, Gesteland RF, Atkins JF, Freier SM. Thermodynamic criteria for high hit rate antisense oligonucleotide design. Nucleic Acids Research. 31: 4989-94. PMID 12930948 DOI: 10.1093/Nar/Gkg710 |
0.31 |
|
| 2003 |
Hansen TM, Baranov PV, Ivanov IP, Gesteland RF, Atkins JF. Maintenance of the correct open reading frame by the ribosome. Embo Reports. 4: 499-504. PMID 12717454 DOI: 10.1038/Sj.Embor.Embor825 |
0.422 |
|
| 2003 |
Giddings MC, Shah AA, Gesteland RF, Moore B. Genome-based peptide fingerprint scanning. Proceedings of the National Academy of Sciences of the United States of America. 100: 20-25. PMID 12518051 DOI: 10.1073/Pnas.0136893100 |
0.303 |
|
| 2002 |
Giddings MC, Shah AA, Freier S, Atkins JF, Gesteland RF, Matveeva OV. Artificial neural network prediction of antisense oligodeoxynucleotide activity. Nucleic Acids Research. 30: 4295-304. PMID 12364609 DOI: 10.1093/Nar/Gkf557 |
0.321 |
|
| 2002 |
Wang Y, Wills NM, Du Z, Rangan A, Atkins JF, Gesteland RF, Hoffman DW. Comparative studies of frameshifting and nonframeshifting RNA pseudoknots: a mutational and NMR investigation of pseudoknots derived from the bacteriophage T2 gene 32 mRNA and the retroviral gag-pro frameshift site. Rna (New York, N.Y.). 8: 981-96. PMID 12212853 DOI: 10.1017/S1355838202024044 |
0.366 |
|
| 2002 |
Shah AA, Giddings MC, Parvaz JB, Gesteland RF, Atkins JF, Ivanov IP. Computational identification of putative programmed translational frameshift sites. Bioinformatics (Oxford, England). 18: 1046-53. PMID 12176827 DOI: 10.1093/Bioinformatics/18.8.1046 |
0.375 |
|
| 2002 |
Baranov PV, Gesteland RF, Atkins JF. Recoding: translational bifurcations in gene expression. Gene. 286: 187-201. PMID 11943474 DOI: 10.1016/S0378-1119(02)00423-7 |
0.365 |
|
| 2002 |
Baranov PV, Gesteland RF, Atkins JF. Release factor 2 frameshifting sites in different bacteria. Embo Reports. 3: 373-7. PMID 11897659 DOI: 10.1093/Embo-Reports/Kvf065 |
0.449 |
|
| 2002 |
Bertrand C, Prère MF, Gesteland RF, Atkins JF, Fayet O. Influence of the stacking potential of the base 3' of tandem shift codons on -1 ribosomal frameshifting used for gene expression. Rna (New York, N.Y.). 8: 16-28. PMID 11871658 DOI: 10.1017/S1355838202012086 |
0.443 |
|
| 2001 |
Atkins JF, Baranov PV, Fayet O, Herr AJ, Howard MT, Ivanov IP, Matsufuji S, Miller WA, Moore B, Prère MF, Wills NM, Zhou J, Gesteland RF. Overriding standard decoding: implications of recoding for ribosome function and enrichment of gene expression. Cold Spring Harbor Symposia On Quantitative Biology. 66: 217-32. PMID 12762024 DOI: 10.1101/Sqb.2001.66.217 |
0.325 |
|
| 2001 |
Herr AJ, Wills NM, Nelson CC, Gesteland RF, Atkins JF. Drop-off during ribosome hopping. Journal of Molecular Biology. 311: 445-52. PMID 11492998 DOI: 10.1006/Jmbi.2001.4899 |
0.441 |
|
| 2001 |
Herr AJ, Nelson CC, Wills NM, Gesteland RF, Atkins JF. Analysis of the roles of tRNA structure, ribosomal protein L9, and the bacteriophage T4 gene 60 bypassing signals during ribosome slippage on mRNA. Journal of Molecular Biology. 309: 1029-48. PMID 11399077 DOI: 10.1006/Jmbi.2001.4717 |
0.449 |
|
| 2001 |
Felden B, Massire C, Westhof E, Atkins JF, Gesteland RF. Phylogenetic analysis of tmRNA genes within a bacterial subgroup reveals a specific structural signature. Nucleic Acids Research. 29: 1602-7. PMID 11266563 DOI: 10.1093/Nar/29.7.1602 |
0.417 |
|
| 2001 |
Baranov PV, Gurvich OL, Fayet O, Prère MF, Miller WA, Gesteland RF, Atkins JF, Giddings MC. RECODE: a database of frameshifting, bypassing and codon redefinition utilized for gene expression. Nucleic Acids Research. 29: 264-7. PMID 11125107 DOI: 10.1093/Nar/29.1.264 |
0.362 |
|
| 2000 |
Atkins JF, Gesteland RF. The twenty-first amino acid. Nature. 407: 463, 465. PMID 11028985 DOI: 10.1038/35035189 |
0.307 |
|
| 2000 |
Moore B, Nelson CC, Persson BC, Gesteland RF, Atkins JF. Decoding of tandem quadruplets by adjacent tRNAs with eight-base anticodon loops. Nucleic Acids Research. 28: 3615-24. PMID 10982884 DOI: 10.1093/Nar/28.18.3615 |
0.397 |
|
| 2000 |
Herr AJ, Atkins JF, Gesteland RF. Coupling of open reading frames by translational bypassing. Annual Review of Biochemistry. 69: 343-72. PMID 10966462 DOI: 10.1146/Annurev.Biochem.69.1.343 |
0.439 |
|
| 2000 |
Ivanov IP, Gesteland RF, Atkins JF. Antizyme expression: a subversion of triplet decoding, which is remarkably conserved by evolution, is a sensor for an autoregulatory circuit. Nucleic Acids Research. 28: 3185-96. PMID 10954585 DOI: 10.1093/Nar/28.17.3185 |
0.341 |
|
| 2000 |
Howard MT, Shirts BH, Petros LM, Flanigan KM, Gesteland RF, Atkins JF. Sequence specificity of aminoglycoside-induced stop condon readthrough: potential implications for treatment of Duchenne muscular dystrophy. Annals of Neurology. 48: 164-9. PMID 10939566 DOI: 10.1002/1531-8249(200008)48:2<164::Aid-Ana5>3.0.Co;2-B |
0.39 |
|
| 2000 |
Matveeva OV, Tsodikov AD, Giddings M, Freier SM, Wyatt JR, Spiridonov AN, Shabalina SA, Gesteland RF, Atkins JF. Identification of sequence motifs in oligonucleotides whose presence is correlated with antisense activity. Nucleic Acids Research. 28: 2862-5. PMID 10908347 DOI: 10.1093/Nar/28.15.2862 |
0.349 |
|
| 2000 |
Herr AJ, Gesteland RF, Atkins JF. One protein from two open reading frames: mechanism of a 50 nt translational bypass. The Embo Journal. 19: 2671-80. PMID 10835364 DOI: 10.1093/Emboj/19.11.2671 |
0.431 |
|
| 2000 |
Ivanov IP, Rohrwasser A, Terreros DA, Gesteland RF, Atkins JF. Discovery of a spermatogenesis stage-specific ornithine decarboxylase antizyme: antizyme 3. Proceedings of the National Academy of Sciences of the United States of America. 97: 4808-13. PMID 10781085 DOI: 10.1073/Pnas.070055897 |
0.396 |
|
| 2000 |
Ivanov IP, Matsufuji S, Murakami Y, Gesteland RF, Atkins JF. Conservation of polyamine regulation by translational frameshifting from yeast to mammals. The Embo Journal. 19: 1907-17. PMID 10775274 DOI: 10.1093/Emboj/19.8.1907 |
0.409 |
|
| 2000 |
Moore B, Persson BC, Nelson CC, Gesteland RF, Atkins JF. Quadruplet codons: implications for code expansion and the specification of translation step size. Journal of Molecular Biology. 298: 195-209. PMID 10764591 DOI: 10.1006/Jmbi.2000.3658 |
0.416 |
|
| 2000 |
Lieberman KR, Firpo MA, Herr AJ, Nguyenle T, Atkins JF, Gesteland RF, Noller HF. The 23 S rRNA environment of ribosomal protein L9 in the 50 S ribosomal subunit. Journal of Molecular Biology. 297: 1129-43. PMID 10764578 DOI: 10.1006/Jmbi.2000.3621 |
0.499 |
|
| 2000 |
Larsen B, Wills NM, Nelson C, Atkins JF, Gesteland RF. Nonlinearity in genetic decoding: homologous DNA replicase genes use alternatives of transcriptional slippage or translational frameshifting. Proceedings of the National Academy of Sciences of the United States of America. 97: 1683-8. PMID 10677518 DOI: 10.1073/Pnas.97.4.1683 |
0.434 |
|
| 2000 |
Moore B, Persson BC, Nelson CC, Gesteland RF, Atkins J. Erratum: Quadruplet codons: Implications for code expansion and the specification of translation step size (Journal of Molecular Biology (2000) 298 (195-209)) Journal of Molecular Biology. 302. DOI: 10.1006/Jmbi.2000.4058 |
0.324 |
|
| 1999 |
Alam SL, Atkins JF, Gesteland RF. Programmed ribosomal frameshifting: much ado about knotting! Proceedings of the National Academy of Sciences of the United States of America. 96: 14177-9. PMID 10588670 DOI: 10.1073/Pnas.96.25.14177 |
0.35 |
|
| 1999 |
Felden B, Gesteland RF, Atkins JF. Eubacterial tmRNAs: everywhere except the alpha-proteobacteria? Biochimica Et Biophysica Acta. 1446: 145-8. PMID 10395928 DOI: 10.1016/S0167-4781(99)00085-8 |
0.397 |
|
| 1999 |
Zhou J, Atkins JF, Gesteland RF. Structure of human ornithine decarboxylase antizyme 2 gene. Gene. 232: 165-71. PMID 10352227 DOI: 10.1016/S0378-1119(99)00128-6 |
0.379 |
|
| 1999 |
Herr AJ, Atkins JF, Gesteland RF. Mutations which alter the elbow region of tRNA2Gly reduce T4 gene 60 translational bypassing efficiency. The Embo Journal. 18: 2886-96. PMID 10329634 DOI: 10.1093/Emboj/18.10.2886 |
0.406 |
|
| 1999 |
Alam SL, Wills NM, Ingram JA, Atkins JF, Gesteland RF. Structural studies of the RNA pseudoknot required for readthrough of the gag-termination codon of murine leukemia virus. Journal of Molecular Biology. 288: 837-52. PMID 10329183 DOI: 10.1006/Jmbi.1999.2713 |
0.367 |
|
| 1999 |
Atkins JF, Gesteland RF. Intricacies of ribosomal frameshifting. Nature Structural Biology. 6: 206-7. PMID 10074934 DOI: 10.1038/6642 |
0.372 |
|
| 1999 |
Rettberg CC, Prère MF, Gesteland RF, Atkins JF, Fayet O. A three-way junction and constituent stem-loops as the stimulator for programmed -1 frameshifting in bacterial insertion sequence IS911. Journal of Molecular Biology. 286: 1365-78. PMID 10064703 DOI: 10.1006/Jmbi.1999.2546 |
0.363 |
|
| 1999 |
Nameki N, Felden B, Atkins JF, Gesteland RF, Himeno H, Muto A. Functional and structural analysis of a pseudoknot upstream of the tag-encoded sequence in E. coli tmRNA. Journal of Molecular Biology. 286: 733-44. PMID 10024447 DOI: 10.1006/Jmbi.1998.2487 |
0.45 |
|
| 1999 |
Atkins JF, Böck A, Matsufuji S, Gesteland RF. 24 Dynamics of the Genetic Code Cold Spring Harbor Monograph Archive. 37: 637-673. DOI: 10.1101/087969589.37.637 |
0.339 |
|
| 1998 |
Ivanov IP, Gesteland RF, Atkins JF. A second mammalian antizyme: conservation of programmed ribosomal frameshifting. Genomics. 52: 119-29. PMID 9782076 DOI: 10.1006/Geno.1998.5434 |
0.385 |
|
| 1998 |
Ivanov IP, Gesteland RF, Matsufuji S, Atkins JF. Programmed frameshifting in the synthesis of mammalian antizyme is +1 in mammals, predominantly +1 in fission yeast, but -2 in budding yeast. Rna (New York, N.Y.). 4: 1230-8. PMID 9769097 DOI: 10.1017/S1355838298980864 |
0.425 |
|
| 1998 |
Choi KM, Atkins JF, Gesteland RF, Brimacombe R. Flexibility of the nascent polypeptide chain within the ribosome--contacts from the peptide N-terminus to a specific region of the 30S subunit. European Journal of Biochemistry / Febs. 255: 409-13. PMID 9716382 DOI: 10.1046/J.1432-1327.1998.2550409.X |
0.33 |
|
| 1998 |
Hickerson RP, Watkins-Sims CD, Burrows CJ, Atkins JF, Gesteland RF, Felden B. A nickel complex cleaves uridine in folded RNA structures: application to E. coli tmRNA and related engineered molecules. Journal of Molecular Biology. 279: 577-87. PMID 9641979 DOI: 10.1006/Jmbi.1998.1813 |
0.38 |
|
| 1998 |
Alam SL, Nelson CC, Felden B, Atkins JF, Gesteland RF. Effects of 3'-terminal phosphates in RNA produced by ribozyme cleavage. Rna (New York, N.Y.). 4: 607-12. PMID 9622120 DOI: 10.1017/S1355838298971928 |
0.345 |
|
| 1998 |
Felden B, Hanawa K, Atkins JF, Himeno H, Muto A, Gesteland RF, McCloskey JA, Crain PF. Presence and location of modified nucleotides in Escherichia coli tmRNA: structural mimicry with tRNA acceptor branches. The Embo Journal. 17: 3188-96. PMID 9606200 DOI: 10.1093/Emboj/17.11.3188 |
0.409 |
|
| 1998 |
Ivanov IP, Simin K, Letsou A, Atkins JF, Gesteland RF. The Drosophila gene for antizyme requires ribosomal frameshifting for expression and contains an intronic gene for snRNP Sm D3 on the opposite strand. Molecular and Cellular Biology. 18: 1553-61. PMID 9488472 DOI: 10.1128/Mcb.18.3.1553 |
0.442 |
|
| 1997 |
Matveeva O, Felden B, Audlin S, Gesteland RF, Atkins JF. A rapid in vitro method for obtaining RNA accessibility patterns for complementary DNA probes: correlation with an intracellular pattern and known RNA structures. Nucleic Acids Research. 25: 5010-6. PMID 9396809 DOI: 10.1093/Nar/25.24.5010 |
0.381 |
|
| 1997 |
Larsen B, Gesteland RF, Atkins JF. Structural probing and mutagenic analysis of the stem-loop required for Escherichia coli dnaX ribosomal frameshifting: programmed efficiency of 50%. Journal of Molecular Biology. 271: 47-60. PMID 9300054 DOI: 10.1006/Jmbi.1997.1162 |
0.324 |
|
| 1997 |
Wills NM, Ingram JA, Gesteland RF, Atkins JF. Reported translational bypass in a trpR'-lacZ' fusion is accounted for by unusual initiation and +1 frameshifting. Journal of Molecular Biology. 271: 491-8. PMID 9281421 DOI: 10.1006/Jmbi.1997.1187 |
0.374 |
|
| 1996 |
Felden B, Himeno H, Muto A, Atkins JF, Gesteland RF. Structural organization of Escherichia coli tmRNA. Biochimie. 78: 979-83. PMID 9150875 DOI: 10.1016/S0300-9084(97)86720-X |
0.334 |
|
| 1996 |
Gesteland RF, Atkins JF. Recoding: dynamic reprogramming of translation. Annual Review of Biochemistry. 65: 741-68. PMID 8811194 DOI: 10.1146/Annurev.Bi.65.070196.003521 |
0.413 |
|
| 1996 |
Adamski FM, Atkins JF, Gesteland RF. Ribosomal protein L9 interactions with 23 S rRNA: the use of a translational bypass assay to study the effect of amino acid substitutions. Journal of Molecular Biology. 261: 357-71. PMID 8780779 DOI: 10.1006/Jmbi.1996.0469 |
0.377 |
|
| 1996 |
Felden B, Atkins JF, Gesteland RF. tRNA and mRNA both in the same molecule. Nature Structural Biology. 3: 494. PMID 8646531 DOI: 10.1038/Nsb0696-494 |
0.312 |
|
| 1996 |
Matsufuji S, Matsufuji T, Wills NM, Gesteland RF, Atkins JF. Reading two bases twice: mammalian antizyme frameshifting in yeast. The Embo Journal. 15: 1360-70. PMID 8635469 DOI: 10.1002/J.1460-2075.1996.Tb00478.X |
0.439 |
|
| 1996 |
Atkins JF, Gesteland RF. 23 Regulatory Recoding Cold Spring Harbor Monograph Archive. 30: 653-684. DOI: 10.1101/087969458.30.653 |
0.464 |
|
| 1995 |
Larsen B, Peden J, Matsufuji S, Matsufuji T, Brady K, Maldonado R, Wills NM, Fayet O, Atkins JF, Gesteland RF. Upstream stimulators for recoding. Biochemistry and Cell Biology = Biochimie Et Biologie Cellulaire. 73: 1123-9. PMID 8722029 |
0.33 |
|
| 1995 |
Matsufuji S, Matsufuji T, Miyazaki Y, Murakami Y, Atkins JF, Gesteland RF, Hayashi S. Autoregulatory frameshifting in decoding mammalian ornithine decarboxylase antizyme. Cell. 80: 51-60. PMID 7813017 DOI: 10.1016/0092-8674(95)90450-6 |
0.444 |
|
| 1994 |
Tuohy TM, Kidd T, Gesteland RF, Atkins JF. Uninterrupted translation through putative 12-nucleotide coding gap in sequence of carA: business as usual. Journal of Bacteriology. 176: 265-7. PMID 8282707 DOI: 10.1128/Jb.176.1.265-267.1994 |
0.404 |
|
| 1994 |
Wills NM, Gesteland RF, Atkins JF. Pseudoknot-dependent read-through of retroviral gag termination codons: importance of sequences in the spacer and loop 2. The Embo Journal. 13: 4137-44. PMID 8076609 DOI: 10.1002/J.1460-2075.1994.Tb06731.X |
0.409 |
|
| 1994 |
Cherry JL, Young H, Di Sera LJ, Ferguson FM, Kimball AW, Dunn DM, Gesteland RF, Weiss RB. Enzyme-linked fluorescent detection for automated multiplex DNA sequencing. Genomics. 20: 68-74. PMID 8020958 DOI: 10.1006/Geno.1994.1128 |
0.335 |
|
| 1994 |
Larsen B, Wills NM, Gesteland RF, Atkins JF. rRNA-mRNA base pairing stimulates a programmed -1 ribosomal frameshift. Journal of Bacteriology. 176: 6842-51. PMID 7961443 DOI: 10.1128/Jb.176.22.6842-6851.1994 |
0.453 |
|
| 1994 |
Ives JT, Gesteland RF, Stockham TG. An automated film reader for DNA sequencing based on homomorphic deconvolution. Ieee Transactions On Bio-Medical Engineering. 41: 509-19. PMID 7927370 DOI: 10.1109/10.293238 |
0.343 |
|
| 1994 |
Herbst KL, Nichols LM, Gesteland RF, Weiss RB. A mutation in ribosomal protein L9 affects ribosomal hopping during translation of gene 60 from bacteriophage T4. Proceedings of the National Academy of Sciences of the United States of America. 91: 12525-9. PMID 7809071 DOI: 10.1073/Pnas.91.26.12525 |
0.454 |
|
| 1994 |
Wagner LA, Gesteland RF, Dayhuff TJ, Weiss RB. An efficient Shine-Dalgarno sequence but not translation is necessary for lacZ mRNA stability in Escherichia coli. Journal of Bacteriology. 176: 1683-8. PMID 7510674 DOI: 10.1128/Jb.176.6.1683-1688.1994 |
0.4 |
|
| 1993 |
Chanut FA, Grabau EA, Gesteland RF. Complex organization of the soybean mitochondrial genome: recombination repeats and multiple transcripts at the atpA loci. Current Genetics. 23: 234-47. PMID 8435853 DOI: 10.1007/Bf00351502 |
0.437 |
|
| 1993 |
Gesteland RF, Cech TR, Atkins JF. Preface/Front Matter Cold Spring Harbor Monograph Archive. 24. DOI: 10.1101/087969380.24.I |
0.32 |
|
| 1993 |
O'Connor M, Willis NM, Bossi L, Gesteland RF, Atkins JF. Functional tRNAs with altered 3′ ends The Embo Journal. 12: 2559-2566. DOI: 10.1002/J.1460-2075.1993.Tb05911.X |
0.402 |
|
| 1992 |
Tuohy TM, Thompson S, Gesteland RF, Atkins JF. Seven, eight and nine-membered anticodon loop mutants of tRNA(2Arg) which cause +1 frameshifting. Tolerance of DHU arm and other secondary mutations. Journal of Molecular Biology. 228: 1042-54. PMID 1474576 DOI: 10.1016/0022-2836(92)90313-9 |
0.413 |
|
| 1991 |
Weiss RB, Dunn DM, Atkins JF, Gesteland RF. Ribosomal frameshifting from -2 to +50 nucleotides. Progress in Nucleic Acid Research and Molecular Biology. 39: 159-83. PMID 2247607 DOI: 10.1016/S0079-6603(08)60626-1 |
0.461 |
|
| 1991 |
Skuzeski JM, Nichols LM, Gesteland RF, Atkins JF. The signal for a leaky UAG stop codon in several plant viruses includes the two downstream codons. Journal of Molecular Biology. 218: 365-73. PMID 2010914 DOI: 10.1016/0022-2836(91)90718-L |
0.443 |
|
| 1991 |
Condron BG, Gesteland RF, Atkins JF. An analysis of sequences stimulating frameshifting in the decoding of gene 10 of bacteriophage T7. Nucleic Acids Research. 19: 5607-12. PMID 1945837 DOI: 10.1093/Nar/19.20.5607 |
0.69 |
|
| 1991 |
Condron BG, Atkins JF, Gesteland RF. Frameshifting in gene 10 of bacteriophage T7. Journal of Bacteriology. 173: 6998-7003. PMID 1938901 DOI: 10.1128/Jb.173.21.6998-7003.1991 |
0.688 |
|
| 1991 |
Wills NM, Gesteland RF, Atkins JF. Evidence that a downstream pseudoknot is required for translational read-through of the Moloney murine leukemia virus gag stop codon. Proceedings of the National Academy of Sciences of the United States of America. 88: 6991-5. PMID 1871115 DOI: 10.1073/Pnas.88.16.6991 |
0.416 |
|
| 1990 |
O'Connor M, Gesteland RF, Atkins JF. Sequence of E.coli K12 valU operon which contains 3 genes for tRNA(Val1) and 1 gene for tRNA(Lys). Nucleic Acids Research. 18: 672. PMID 2408024 DOI: 10.1093/Nar/18.3.672 |
0.358 |
|
| 1990 |
Swerdlow H, Gesteland R. Capillary gel electrophoresis for rapid, high resolution DNA sequencing. Nucleic Acids Research. 18: 1415-9. PMID 2326186 DOI: 10.1093/Nar/18.6.1415 |
0.311 |
|
| 1990 |
Tuohy TM, Thompson S, Gesteland RF, Hughes D, Atkins JF. The role of EF-Tu and other translation components in determining translocation step size. Biochimica Et Biophysica Acta. 1050: 274-8. PMID 2207156 DOI: 10.1016/0167-4781(90)90180-A |
0.389 |
|
| 1990 |
Wagner LA, Weiss RB, Driscoll R, Dunn DS, Gesteland RF. Transcriptional slippage occurs during elongation at runs of adenine or thymine in Escherichia coli. Nucleic Acids Research. 18: 3529-35. PMID 2194164 DOI: 10.1093/Nar/18.12.3529 |
0.435 |
|
| 1990 |
Milton DL, Casper ML, Gesteland RF. Saturation mutagenesis of a DNA region of bend. Base steps other than ApA influence the bend. Journal of Molecular Biology. 213: 135-40. PMID 2160018 DOI: 10.1016/S0022-2836(05)80126-3 |
0.331 |
|
| 1990 |
Xu G, O'Connell P, Viskochil D, Cawthon R, Robertson M, Culver M, Dunn D, Stevens J, Gesteland R, White R, Weiss R. The neurofibromatosis type 1 gene encodes a protein related to GAP Cell. 62: 599-608. PMID 2116237 DOI: 10.1016/0092-8674(90)90024-9 |
0.401 |
|
| 1990 |
Cawthon RM, Weiss R, Xu G, Viskochil D, Culver M, Stevens J, Robertson M, Dunn D, Gesteland R, O'Connell P, White R. A major segment of the neurofibromatosis type 1 gene: cDNA sequence, genomic structure, and point mutations. Cell. 62: 193-201. PMID 2114220 DOI: 10.1016/0092-8674(90)90253-B |
0.412 |
|
| 1990 |
Skuzeski JM, Nichols LM, Gesteland RF. Analysis of leaky viral translation termination codons in vivo by transient expression of improved beta-glucuronidase vectors. Plant Molecular Biology. 15: 65-79. PMID 2103444 DOI: 10.1007/Bf00017725 |
0.42 |
|
| 1990 |
Cawton RM, Weiss R, Xu G, Viskochil D, Culver M, Stevens J, Robertson M, Dunn D, Gesteland R, O'Connel P, White R. Erratum: A major segment of the neurofibromatosis type 1 gene: cDNA sequence, genomic structure, and point mutations (Cell 62, 193-201, 1990; July 13 issue) Cell. 62. DOI: 10.1016/0092-8674(90)90025-A |
0.35 |
|
| 1989 |
O'Connor M, Gesteland R, Atkins J. tRNA hopping: enhancement by an expanded anticodon. The Embo Journal. 8: 4315-4323. DOI: 10.1002/J.1460-2075.1989.Tb08618.X |
0.444 |
|
| 1988 |
Weiss RB, Dunn DM, Atkins JF, Gesteland RF. Slippery runs, shifty stops, backward steps, and forward hops: -2, -1, +1, +2, +5, and +6 ribosomal frameshifting. Cold Spring Harbor Symposia On Quantitative Biology. 52: 687-93. PMID 3135981 DOI: 10.1101/Sqb.1987.052.01.078 |
0.324 |
|
| 1988 |
Milton DL, Gesteland RF. Bends in SV40 DNA: use of mutagenesis to identify the critical bases involved. Nucleic Acids Research. 16: 3931-49. PMID 2836805 DOI: 10.1093/Nar/16.9.3931 |
0.345 |
|
| 1988 |
Grabau E, Havlik M, Gesteland R. Chimeric organization of two genes for the soybean mitochondrial ATPase subunit 6. Current Genetics. 13: 83-9. PMID 2834107 DOI: 10.1007/Bf00365761 |
0.375 |
|
| 1988 |
Weiss RB, Dunn DM, Dahlberg AE, Atkins JF, Gesteland RF. Reading frame switch caused by base-pair formation between the 3′ end of 16S rRNA and the mRNA during elongation of protein synthesis in Escherichia coli. The Embo Journal. 7: 1503-1507. DOI: 10.1002/J.1460-2075.1988.Tb02969.X |
0.439 |
|
| 1986 |
Bruce AG, Atkins JF, Gesteland RF. tRNA anticodon replacement experiments show that ribosomal frameshifting can be caused by doublet decoding. Proceedings of the National Academy of Sciences of the United States of America. 83: 5062-6. PMID 2425361 DOI: 10.1073/Pnas.83.14.5062 |
0.435 |
|
| 1984 |
Atkins JF, Gesteland RF. Resolution of the discrepancy between a gene translation--termination codon and the deduced sequence for release of the encoded polypeptide. European Journal of Biochemistry. 137: 509-16. PMID 6662107 DOI: 10.1111/J.1432-1033.1983.Tb07855.X |
0.386 |
|
| 1984 |
Morgens PH, Grabau EA, Gesteland RF. A novel soybean mitochondrial transcript resulting from a DNA rearrangement involving the 5S rRNA gene. Nucleic Acids Research. 12: 5665-84. PMID 6540439 DOI: 10.1093/Nar/12.14.5665 |
0.359 |
|
| 1984 |
Laughon A, Driscoll R, Wills N, Gesteland RF. Identification of two proteins encoded by the Saccharomyces cerevisiae GAL4 gene. Molecular and Cellular Biology. 4: 268-75. PMID 6366517 DOI: 10.1128/Mcb.4.2.268 |
0.362 |
|
| 1984 |
Laughon A, Gesteland RF. Primary structure of the Saccharomyces cerevisiae GAL4 gene. Molecular and Cellular Biology. 4: 260-7. PMID 6366516 DOI: 10.1128/Mcb.4.2.260 |
0.426 |
|
| 1984 |
Naylor SL, Zabel BU, Manser T, Gesteland R, Sakaguchi AY. Localization of Human U1 Small Nuclear RNA Genes to Band p36.3 of Chromosome 1 by In Situ Hybridization Somatic Cell and Molecular Genetics. 10: 307-313. PMID 6202011 DOI: 10.1007/Bf01535252 |
0.328 |
|
| 1984 |
BRUCE AG, ATKINS JF, WILLS N, BARE L, UHLENBECK O, GESTELAND RF. Replacement of anticodon-loop nucleotides to produce functional tRNAs Biochemical Society Transactions. 12: 488-488. DOI: 10.1042/Bst0120488 |
0.321 |
|
| 1983 |
Wills N, Gesteland RF, Karn J, Barnett L, Bolten S, Waterston RH. The genes sup-7 X and sup-5 III of C. elegans suppress amber nonsense mutations via altered transfer RNA. Cell. 33: 575-83. PMID 6571695 DOI: 10.1016/0092-8674(83)90438-5 |
0.347 |
|
| 1983 |
Bare L, Bruce AG, Gesteland R, Uhlenbeck OC. Uridine-33 in yeast tRNA not essential for amber suppression Nature. 305: 554-556. PMID 6353248 DOI: 10.1038/305554A0 |
0.401 |
|
| 1982 |
Bruce AG, Atkins JF, Wills N, Uhlenbeck O, Gesteland RF. Replacement of anticodon loop nucleotides to produce functional tRNAs: amber suppressors derived from yeast tRNAPhe. Proceedings of the National Academy of Sciences of the United States of America. 79: 7127-31. PMID 6961400 DOI: 10.1073/Pnas.79.23.7127 |
0.39 |
|
| 1982 |
Laughon A, Gesteland RF. Isolation and preliminary characterization of the GAL4 gene, a positive regulator of transcription in yeast. Proceedings of the National Academy of Sciences of the United States of America. 79: 6827-31. PMID 6294656 DOI: 10.1073/Pnas.79.22.6827 |
0.402 |
|
| 1982 |
Manser T, Gesteland RF. Human U1 loci: genes for human U1 RNA have dramatically similar genomic environments. Cell. 29: 257-64. PMID 6179629 DOI: 10.1016/0092-8674(82)90110-6 |
0.383 |
|
| 1982 |
Van Arsdell SW, Denison RA, Bernstein LB, Weiner AM, Manser T, Gesteland RF. Direct repeats flank three small nuclear RNA pseudogenes in the human genome. Cell. 26: 11-7. PMID 6173130 DOI: 10.1016/0092-8674(81)90028-3 |
0.388 |
|
| 1981 |
Waldron C, Cox BS, Wills N, Gesteland RF, Piper PW, Colby D, Guthrie C. Yeast ochre suppressor SUQ5-ol is an altered tRNA Ser UCA. Nucleic Acids Research. 9: 3077-88. PMID 7024909 DOI: 10.1093/Nar/9.13.3077 |
0.4 |
|
| 1979 |
Atkins JF, Gesteland RF, Reid BR, Anderson CW. Normal tRNAs promote ribosomal frameshifting. Cell. 18: 1119-31. PMID 391405 DOI: 10.1016/0092-8674(79)90225-3 |
0.415 |
|
| 1979 |
Cremer KJ, Bodemer M, Summers WP, Summers WC, Gesteland RF. In vitro suppression of UAG and UGA mutants in the thymidine kinase gene of herpes simplex virus. Proceedings of the National Academy of Sciences of the United States of America. 76: 430-4. PMID 218201 DOI: 10.1073/Pnas.76.1.430 |
0.33 |
|
| 1978 |
Philipson L, Andersson P, Olshevsky U, Weinberg R, Baltimore D, Gesteland R. Translation of MuLV and MSV RNAs in nuclease-treated reticulocyte extracts: Enhancement of the gag-pol polypeptide with yeast suppressor tRNA Cell. 13: 189-199. PMID 202399 DOI: 10.1016/0092-8674(78)90149-6 |
0.415 |
|
| 1978 |
Manley JL, Gesteland RF. Suppression of amber mutants in vitro induced by low temperature. Journal of Molecular Biology. 125: 433-47. PMID 105144 DOI: 10.1016/0022-2836(78)90309-1 |
0.504 |
|
| 1977 |
Atkins JF, Lewis JB, Anderson CW, Gesteland RF. Location of identification of the genes for adenovirus type 2 polypeptides. Biochemical Society Transactions. 4: 859. PMID 1001778 DOI: 10.1042/Bst0040859 |
0.308 |
|
| 1977 |
Gesteland RF, Wills N, Lewis JB, Grodzicker T. Identification of amber and ochre mutants of the human virus Ad2+ND1 Proceedings of the National Academy of Sciences of the United States of America. 74: 4567-4571. PMID 200921 DOI: 10.1073/Pnas.74.10.4567 |
0.356 |
|
| 1976 |
Lewis JB, Atkins JF, Baum PR, Solem R, Gesteland RF, Anderson CW. Location and identification of the genes for adenovirus type 2 early polypeptides. Cell. 7: 141-51. PMID 949741 DOI: 10.1016/0092-8674(76)90264-6 |
0.377 |
|
| 1976 |
Gesteland RF, Wolfner M, Grisafi P, Fink G, Botstein D, Roth JR. Yeast suppressors of UAA and UAG nonsense codons work efficiently in vitro via tRNA. Cell. 7: 381-90. PMID 947546 DOI: 10.1016/0092-8674(76)90167-7 |
0.407 |
|
| 1976 |
Anderson CW, Lewis JB, Baum PR, Gesteland RF. Simian virus 40-specific polypeptides in AD2+ ND1- and Ad2+ ND4-infected cells. Journal of Virology. 18: 685-692. DOI: 10.1128/Jvi.18.2.685-692.1976 |
0.319 |
|
| 1975 |
Atkins JF, Gesteland RF. The synthetase gene of the RNA phages R17, MS2 and f2 has a single UAG terminator codon. Molecular & General Genetics : Mgg. 139: 19-31. PMID 1177864 DOI: 10.1007/Bf00267992 |
0.333 |
|
| 1975 |
Lewis JB, Atkins JF, Anderson CW, Baum PR, Gesteland RF. Mapping of late adenovirus genes by cell-free translation of RNA selected by hybridization to specific DNA fragments. Proceedings of the National Academy of Sciences of the United States of America. 72: 1344-8. PMID 1093178 DOI: 10.1073/Pnas.72.4.1344 |
0.362 |
|
| 1975 |
Boedtker H, Gesteland RF. 1 Physical Properties of RNA Bacteriophages and Their RNA Cold Spring Harbor Monograph Archive. 5: 1-28. DOI: 10.1101/087969109.5.1 |
0.324 |
|
| 1974 |
Allet B, Katagiri KJ, Gesteland RF. Characterization of polypeptides made in vitro from bacteriophage lambda DNA. Journal of Molecular Biology. 78: 589-600. PMID 4762922 DOI: 10.1016/0022-2836(73)90281-7 |
0.334 |
|
| 1974 |
Anderson CW, Lewis JB, Atkins JF, Gesteland RF. Cell-free synthesis of adenovirus 2 proteins programmed by fractionated messenger RNA: a comparison of polypeptide products and messenger RNA lengths. Proceedings of the National Academy of Sciences of the United States of America. 71: 2756-60. PMID 4527690 DOI: 10.1073/Pnas.71.7.2756 |
0.361 |
|
| 1974 |
Allet B, Roberts RJ, Gesteland RF, Solem R. Class of promotor sites for Escherichia coli DNA-dependent RNA polymerase. Nature. 249: 217-21. PMID 4364358 DOI: 10.1038/249217A0 |
0.379 |
|
| 1973 |
Crawford LV, Gesteland RF. Synthesis of polyoma proteins in vitro. Journal of Molecular Biology. 74: 627-34. PMID 4354076 DOI: 10.1016/0022-2836(73)90053-3 |
0.302 |
|
| 1973 |
Gesteland RF, Kahn C. Synthesis of bacteriophage lambda proteins in vitro. Nature: New Biology. 240: 3-6. PMID 4343946 DOI: 10.1038/Newbio240003A0 |
0.35 |
|
| 1970 |
Jeppesen PG, Steitz JA, Gesteland RF, Spahr PF. Gene order in the bacteriophage R17 RNA: 5'-a protein-coat protein-synthetase-3'. Nature. 226: 230-7. PMID 5437513 DOI: 10.1038/226230a0 |
0.477 |
|
| 1970 |
Gesteland RF, Spahr PF. Translation of R-17 RNA fragments. Cold Spring Harbor Symposia On Quantitative Biology. 34: 707-16. PMID 4909526 DOI: 10.1101/Sqb.1969.034.01.080 |
0.314 |
|
| 1969 |
Spahr PF, Farber M, Gesteland RF. Binding Site on R17 RNA for Coat Protein Nature. 222: 455-458. PMID 5768621 DOI: 10.1038/222455A0 |
0.333 |
|
| 1968 |
Spahr PF, Gesteland RF. Specific cleavage of bacteriophage R17 RNA by an endonuclease isolated from E. coli MRE-600. Proceedings of the National Academy of Sciences of the United States of America. 59: 876-83. PMID 4868219 DOI: 10.1073/Pnas.59.3.876 |
0.306 |
|
| 1967 |
Salser W, Gesteland RF, Bolle A. In vitro Synthesis of Bacteriophage Lysozyme Nature. 215: 588-591. PMID 6050209 DOI: 10.1038/215588A0 |
0.314 |
|
| 1966 |
Gesteland RF. Isolation and characterization of ribonuclease I mutants of Escherichia coli. Journal of Molecular Biology. 16: 67-84. PMID 5331244 DOI: 10.1016/S0022-2836(66)80263-2 |
0.377 |
|
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