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Xingang Wang - Publications

Affiliations: 
Cold Spring Harbor Laboratory, Cold Spring Harbor, NY 
Area:
Plant biology
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24 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2022 Alonge M, Lebeigle L, Kirsche M, Jenike K, Ou S, Aganezov S, Wang X, Lippman ZB, Schatz MC, Soyk S. Automated assembly scaffolding using RagTag elevates a new tomato system for high-throughput genome editing. Genome Biology. 23: 258. PMID 36522651 DOI: 10.1186/s13059-022-02823-7  0.624
2022 Kang MS, Kim YJ, Heo J, Rajendran S, Wang X, Bae JH, Lippman Z, Park SJ. Newly Discovered Alleles of the Tomato Antiflorigen Gene Provide a Range of Plant Compactness and Yield. International Journal of Molecular Sciences. 23. PMID 35806155 DOI: 10.3390/ijms23137149  0.661
2022 Kwon CT, Tang L, Wang X, Gentile I, Hendelman A, Robitaille G, Van Eck J, Xu C, Lippman ZB. Dynamic evolution of small signalling peptide compensation in plant stem cell control. Nature Plants. PMID 35347264 DOI: 10.1038/s41477-022-01118-w  0.676
2021 Zhou X, He J, Velanis CN, Zhu Y, He Y, Tang K, Zhu M, Graser L, de Leau E, Wang X, Zhang L, Andy Tao W, Goodrich J, Zhu JK, Zhang CJ. A domesticated Harbinger transposase forms a complex with HDA6 and promotes histone H3 deacetylation at genes but not TEs in Arabidopsis. Journal of Integrative Plant Biology. PMID 33960113 DOI: 10.1111/jipb.13108  0.555
2021 Wang X, Aguirre L, Rodríguez-Leal D, Hendelman A, Benoit M, Lippman ZB. Dissecting cis-regulatory control of quantitative trait variation in a plant stem cell circuit. Nature Plants. 7: 419-427. PMID 33846596 DOI: 10.1038/s41477-021-00898-x  0.752
2020 Alonge M, Wang X, Benoit M, Soyk S, Pereira L, Zhang L, Suresh H, Ramakrishnan S, Maumus F, Ciren D, Levy Y, Harel TH, Shalev-Schlosser G, Amsellem Z, Razifard H, et al. Major Impacts of Widespread Structural Variation on Gene Expression and Crop Improvement in Tomato. Cell. PMID 32553272 DOI: 10.1016/J.Cell.2020.05.021  0.758
2020 Wang X, Ren M, Liu D, Zhang D, Zhang C, Lang Z, Macho AP, Zhang M, Zhu JK. Large-scale eQTL identification in Arabidopsis reveals novel candidate regulators of immune responses and other processes. Journal of Integrative Plant Biology. PMID 32246811 DOI: 10.1111/Jipb.12930  0.551
2019 Alonge M, Soyk S, Ramakrishnan S, Wang X, Goodwin S, Sedlazeck FJ, Lippman ZB, Schatz MC. RaGOO: fast and accurate reference-guided scaffolding of draft genomes. Genome Biology. 20: 224. PMID 31661016 DOI: 10.1186/S13059-019-1829-6  0.637
2019 Nie WF, Lei M, Zhang M, Tang K, Huang H, Zhang C, Miki D, Liu P, Yang Y, Wang X, Zhang H, Lang Z, Liu N, Xu X, Yelagandula R, et al. Histone acetylation recruits the SWR1 complex to regulate active DNA demethylation in . Proceedings of the National Academy of Sciences of the United States of America. PMID 31363048 DOI: 10.1073/Pnas.1906023116  0.594
2019 Yang Y, Tang K, Datsenka TU, Liu W, Lv S, Lang Z, Wang X, Gao J, Wang W, Nie W, Chu Z, Zhang H, Handa AK, Zhu JK, Zhang H. Critical function of DNA methyltransferase 1 in tomato development and regulation of the DNA methylome and transcriptome. Journal of Integrative Plant Biology. PMID 30652405 DOI: 10.1111/Jipb.12778  0.609
2018 Zhang C, Du X, Tang K, Yang Z, Pan L, Zhu P, Luo J, Jiang Y, Zhang H, Wan H, Wang X, Wu F, Tao WA, He XJ, Zhang H, et al. Arabidopsis AGDP1 links H3K9me2 to DNA methylation in heterochromatin. Nature Communications. 9: 4547. PMID 30382101 DOI: 10.1038/S41467-018-06965-W  0.758
2017 Wang P, Zhao Y, Li Z, Hsu CC, Liu X, Fu L, Hou YJ, Du Y, Xie S, Zhang C, Gao J, Cao M, Huang X, Zhu Y, Tang K, ... Wang X, et al. Reciprocal Regulation of the TOR Kinase and ABA Receptor Balances Plant Growth and Stress Response. Molecular Cell. PMID 29290610 DOI: 10.1016/J.Molcel.2017.12.002  0.752
2017 Duan CG, Wang X, Zhang L, Xiong X, Zhang Z, Tang K, Pan L, Hsu CC, Xu H, Tao WA, Zhang H, Zhu JK. A protein complex regulates RNA processing of intronic heterochromatin-containing genes in Arabidopsis. Proceedings of the National Academy of Sciences of the United States of America. PMID 28808009 DOI: 10.1073/pnas.1710683114  0.742
2016 Duan CG, Wang X, Xie S, Pan L, Miki D, Tang K, Hsu CC, Lei M, Zhong Y, Hou YJ, Wang Z, Zhang Z, Mangrauthia SK, Xu H, Zhang H, et al. A pair of transposon-derived proteins function in a histone acetyltransferase complex for active DNA demethylation. Cell Research. PMID 27934869 DOI: 10.1038/Cr.2016.147  0.788
2016 Yang Y, La H, Tang K, Miki D, Yang L, Wang B, Duan CG, Nie W, Wang X, Wang S, Pan Y, Tran EJ, An L, Zhang H, Zhu JK. SAC3B, a central component of the mRNA export complex TREX-2, is required for prevention of epigenetic gene silencing in Arabidopsis. Nucleic Acids Research. PMID 27672037 DOI: 10.1093/Nar/Gkw850  0.781
2016 Hou YJ, Zhu Y, Wang P, Zhao Y, Xie S, Batelli G, Wang B, Duan CG, Wang X, Xing L, Lei M, Yan J, Zhu X, Zhu JK. Type One Protein Phosphatase 1 and Its Regulatory Protein Inhibitor 2 Negatively Regulate ABA Signaling. Plos Genetics. 12: e1005835. PMID 26943172 DOI: 10.1371/Journal.Pgen.1005835  0.742
2016 Best NB, Wang X, Brittsan S, Dean E, Helfers SJ, Homburg R, Mobley ML, Spindler TL, Xie B, Zhang M, Hasegawa PM, Joly RJ, Rhodes D, Dilkes BP. Sunflower ‘Sunspot’ is Hyposensitive to GA3 and has a Missense Mutation in the DELLA Motif of HaDella1 Journal of the American Society For Horticultural Science. 141: 389-394. DOI: 10.21273/Jashs.141.4.389  0.575
2015 Duan CG, Wang X, Tang K, Zhang H, Mangrauthia SK, Lei M, Hsu CC, Hou YJ, Wang C, Li Y, Tao WA, Zhu JK. MET18 Connects the Cytosolic Iron-Sulfur Cluster Assembly Pathway to Active DNA Demethylation in Arabidopsis. Plos Genetics. 11: e1005559. PMID 26492035 DOI: 10.1371/Journal.Pgen.1005559  0.755
2015 Lang Z, Lei M, Wang X, Tang K, Miki D, Zhang H, Mangrauthia SK, Liu W, Nie W, Ma G, Yan J, Duan CG, Hsu CC, Wang C, Tao WA, et al. The methyl-CpG-binding protein MBD7 facilitates active DNA demethylation to limit DNA hyper-methylation and transcriptional gene silencing. Molecular Cell. 57: 971-83. PMID 25684209 DOI: 10.1016/J.Molcel.2015.01.009  0.79
2015 Wang B, Duan CG, Wang X, Hou YJ, Yan J, Gao C, Kim JH, Zhang H, Zhu JK. HOS1 regulates Argonaute1 by promoting transcription of the microRNA gene MIR168b in Arabidopsis. The Plant Journal : For Cell and Molecular Biology. 81: 861-70. PMID 25619693 DOI: 10.1111/Tpj.12772  0.739
2015 Duan CG, Zhang H, Tang K, Zhu X, Qian W, Hou YJ, Wang B, Lang Z, Zhao Y, Wang X, Wang P, Zhou J, Liang G, Liu N, Wang C, et al. Specific but interdependent functions for Arabidopsis AGO4 and AGO6 in RNA-directed DNA methylation. The Embo Journal. 34: 581-92. PMID 25527293 DOI: 10.15252/Embj.201489453  0.761
2014 Zhao Y, Xing L, Wang X, Hou YJ, Gao J, Wang P, Duan CG, Zhu X, Zhu JK. The ABA receptor PYL8 promotes lateral root growth by enhancing MYB77-dependent transcription of auxin-responsive genes. Science Signaling. 7: ra53. PMID 24894996 DOI: 10.1126/Scisignal.2005051  0.729
2014 Lei M, La H, Lu K, Wang P, Miki D, Ren Z, Duan CG, Wang X, Tang K, Zeng L, Yang L, Zhang H, Nie W, Liu P, Zhou J, et al. Arabidopsis EDM2 promotes IBM1 distal polyadenylation and regulates genome DNA methylation patterns. Proceedings of the National Academy of Sciences of the United States of America. 111: 527-32. PMID 24248388 DOI: 10.1073/Pnas.1320106110  0.777
2013 Wang X, Duan CG, Tang K, Wang B, Zhang H, Lei M, Lu K, Mangrauthia SK, Wang P, Zhu G, Zhao Y, Zhu JK. RNA-binding protein regulates plant DNA methylation by controlling mRNA processing at the intronic heterochromatin-containing gene IBM1. Proceedings of the National Academy of Sciences of the United States of America. 110: 15467-72. PMID 24003136 DOI: 10.1073/Pnas.1315399110  0.779
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