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Ruth Williams - Publications

Affiliations: 
2012- WIMM University of Oxford, Oxford, United Kingdom 
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23 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2022 Williams RM, Lukoseviciute M, Sauka-Spengler T, Bronner ME. Single-cell atlas of early chick development reveals gradual segregation of neural crest lineage from the neural plate border during neurulation. Elife. 11. PMID 35088714 DOI: 10.7554/eLife.74464  0.719
2021 Williams RM, Sauka-Spengler T. Rapid and efficient enhancer cloning and screening using the developing chick embryo. Star Protocols. 2: 100507. PMID 34027475 DOI: 10.1016/j.xpro.2021.100507  0.594
2021 Williams RM, Sauka-Spengler T. electroporation of early chicken embryos. Star Protocols. 2: 100424. PMID 33899011 DOI: 10.1016/j.xpro.2021.100424  0.606
2021 Williams RM, Sauka-Spengler T. Dissociation of chick embryonic tissue for FACS and preparation of isolated cells for genome-wide downstream assays. Star Protocols. 2: 100414. PMID 33870222 DOI: 10.1016/j.xpro.2021.100414  0.631
2021 Mok GF, Folkes L, Weldon SA, Maniou E, Martinez-Heredia V, Godden AM, Williams RM, Sauka-Spengler T, Wheeler GN, Moxon S, Münsterberg AE. Characterising open chromatin in chick embryos identifies cis-regulatory elements important for paraxial mesoderm formation and axis extension. Nature Communications. 12: 1157. PMID 33608545 DOI: 10.1038/s41467-021-21426-7  0.799
2020 Lukoseviciute M, Ling ITC, Senanayake U, Candido-Ferreira I, Taylor G, Williams RM, Sauka-Spengler T. Tissue-Specific Biotin Chromatin Immunoprecipitation with Sequencing in Zebrafish and Chicken. Star Protocols. 1: 100066. PMID 33111104 DOI: 10.1016/j.xpro.2020.100066  0.715
2020 Long HK, Osterwalder M, Welsh IC, Hansen K, Davies JOJ, Liu YE, Koska M, Adams AT, Aho R, Arora N, Ikeda K, Williams RM, Sauka-Spengler T, Porteus MH, Mohun T, et al. Loss of Extreme Long-Range Enhancers in Human Neural Crest Drives a Craniofacial Disorder. Cell Stem Cell. PMID 32991838 DOI: 10.1016/j.stem.2020.09.001  0.665
2020 Perera SN, Williams RM, Lyne R, Stubbs O, Buehler DP, Sauka-Spengler T, Noda M, Micklem G, Southard-Smith EM, Baker CVH. Insights into olfactory ensheathing cell development from a laser-microdissection and transcriptome-profiling approach. Glia. PMID 32857879 DOI: 10.1002/Glia.23870  0.589
2020 Simões FC, Cahill TJ, Kenyon A, Gavriouchkina D, Vieira JM, Sun X, Pezzolla D, Ravaud C, Masmanian E, Weinberger M, Mayes S, Lemieux ME, Barnette DN, Gunadasa-Rohling M, Williams RM, et al. Macrophages directly contribute collagen to scar formation during zebrafish heart regeneration and mouse heart repair. Nature Communications. 11: 600. PMID 32001677 DOI: 10.1038/S41467-019-14263-2  0.733
2019 Williams RM, Candido-Ferreira I, Repapi E, Gavriouchkina D, Senanayake U, Ling ITC, Telenius J, Taylor S, Hughes J, Sauka-Spengler T. Reconstruction of the Global Neural Crest Gene Regulatory Network In Vivo. Developmental Cell. 51: 255-276.e7. PMID 31639368 DOI: 10.1016/J.Devcel.2019.10.003  0.763
2019 Hockman D, Chong-Morrison V, Green SA, Gavriouchkina D, Candido-Ferreira I, Ling ITC, Williams RM, Amemiya CT, Smith JJ, Bronner ME, Sauka-Spengler T. A genome-wide assessment of the ancestral neural crest gene regulatory network. Nature Communications. 10: 4689. PMID 31619682 DOI: 10.1038/S41467-019-12687-4  0.728
2018 Lukoseviciute M, Gavriouchkina D, Williams RM, Hochgreb-Hagele T, Senanayake U, Chong-Morrison V, Thongjuea S, Repapi E, Mead A, Sauka-Spengler T. From Pioneer to Repressor: Bimodal foxd3 Activity Dynamically Remodels Neural Crest Regulatory Landscape In Vivo. Developmental Cell. 47: 608-628.e6. PMID 30513303 DOI: 10.1016/J.Devcel.2018.11.009  0.812
2018 Williams RM, Senanayake U, Artibani M, Taylor G, Wells D, Ahmed AA, Sauka-Spengler T. Genome and epigenome engineering CRISPR toolkit for in vivo modulation of cis-regulatory interactions and gene expression in the chicken embryo. Development (Cambridge, England). PMID 29386245 DOI: 10.1242/Dev.160333  0.772
2017 Vieira JM, Howard S, Villa Del Campo C, Bollini S, Dubé KN, Masters M, Barnette DN, Rohling M, Sun X, Hankins LE, Gavriouchkina D, Williams R, Metzger D, Chambon P, Sauka-Spengler T, et al. BRG1-SWI/SNF-dependent regulation of the Wt1 transcriptional landscape mediates epicardial activity during heart development and disease. Nature Communications. 8: 16034. PMID 28737171 DOI: 10.1038/Ncomms16034  0.788
2017 Williams RM, Winkfein RJ, Ginger RS, Green MR, Schnetkamp PP, Wheeler GN. A functional approach to understanding the role of NCKX5 in Xenopus pigmentation. Plos One. 12: e0180465. PMID 28692664 DOI: 10.1371/Journal.Pone.0180465  0.632
2016 Hellner K, Miranda F, Fotso Chedom D, Herrero-Gonzalez S, Hayden DM, Tearle R, Artibani M, KaramiNejadRanjbar M, Williams R, Gaitskell K, Elorbany S, Xu R, Laios A, Buiga P, Ahmed K, et al. Premalignant SOX2 overexpression in the fallopian tubes of ovarian cancer patients: Discovery and validation studies. Ebiomedicine. PMID 27492892 DOI: 10.1016/J.Ebiom.2016.06.048  0.628
2016 Hay D, Hughes JR, Babbs C, Davies JO, Graham BJ, Hanssen LL, Kassouf MT, Oudelaar AM, Sharpe JA, Suciu MC, Telenius J, Williams R, Rode C, Li PS, Pennacchio LA, et al. Genetic dissection of the α-globin super-enhancer in vivo. Nature Genetics. PMID 27376235 DOI: 10.1038/Ng.3605  0.695
2016 Bogdanović O, Smits AH, de la Calle Mustienes E, Tena JJ, Ford E, Williams R, Senanayake U, Schultz MD, Hontelez S, van Kruijsbergen I, Rayon T, Gnerlich F, Carell T, Veenstra GJ, Manzanares M, et al. Active DNA demethylation at enhancers during the vertebrate phylotypic period. Nature Genetics. PMID 26928226 DOI: 10.1038/Ng.3522  0.653
2007 Roessler S, Györy I, Imhof S, Spivakov M, Williams RR, Busslinger M, Fisher AG, Grosschedl R. Distinct promoters mediate the regulation of Ebf1 gene expression by interleukin-7 and Pax5. Molecular and Cellular Biology. 27: 579-94. PMID 17101802 DOI: 10.1128/Mcb.01192-06  0.395
2006 Williams RR, Azuara V, Perry P, Sauer S, Dvorkina M, Jørgensen H, Roix J, McQueen P, Misteli T, Merkenschlager M, Fisher AG. Neural induction promotes large-scale chromatin reorganisation of the Mash1 locus. Journal of Cell Science. 119: 132-40. PMID 16371653 DOI: 10.1242/Jcs.02727  0.393
2003 Azuara V, Brown KE, Williams RR, Webb N, Dillon N, Festenstein R, Buckle V, Merkenschlager M, Fisher AG. Heritable gene silencing in lymphocytes delays chromatid resolution without affecting the timing of DNA replication. Nature Cell Biology. 5: 668-74. PMID 12833066 DOI: 10.1038/ncb1006  0.34
2003 Williams RR. Transcription and the territory: the ins and outs of gene positioning. Trends in Genetics : Tig. 19: 298-302. PMID 12801719 DOI: 10.1016/S0168-9525(03)00109-4  0.314
2002 Williams RR, Broad S, Sheer D, Ragoussis J. Subchromosomal positioning of the epidermal differentiation complex (EDC) in keratinocyte and lymphoblast interphase nuclei. Experimental Cell Research. 272: 163-75. PMID 11777341 DOI: 10.1006/excr.2001.5400  0.368
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