| Year |
Citation |
Score |
| 2023 |
Abyadeh M, Gupta V, Liu X, Rossio V, Mirzaei M, Cornish J, Paulo JA, Haynes PA. Proteome-Wide Profiling Using Sample Multiplexing of a Human Cell Line Treated with Cannabidiol (CBD) and Tetrahydrocannabinol (THC). Proteomes. 11. PMID 37987316 DOI: 10.3390/proteomes11040036 |
0.592 |
|
| 2023 |
Abyadeh M, Gupta V, Paulo JA, Mahmoudabad AG, Shadfar S, Mirshahvaladi S, Gupta V, Nguyen CTO, Finkelstein DI, You Y, Haynes PA, Salekdeh GH, Graham SL, Mirzaei M. Amyloid-beta and tau protein beyond Alzheimer's disease. Neural Regeneration Research. 19: 1262-1276. PMID 37905874 DOI: 10.4103/1673-5374.386406 |
0.529 |
|
| 2023 |
Abyadeh M, Gupta V, Paulo JA, Sheriff S, Shadfar S, Fitzhenry M, Amirkhani A, Gupta V, Salekdeh GH, Haynes PA, Graham SL, Mirzaei M. Apolipoprotein ε in Brain and Retinal Neurodegenerative Diseases. Aging and Disease. 14: 1311-1330. PMID 37199411 DOI: 10.14336/AD.2023.0312-1 |
0.485 |
|
| 2023 |
Abyadeh M, Gupta V, Paulo JA, Sheriff S, Shadfar S, Fitzhenry M, Amirkhani A, Gupta V, Salekdeh GH, Haynes PA, Graham SL, Mirzaei M. Apolipoprotein ε in Brain and Retinal Neurodegenerative Diseases. Aging and Disease. PMID 37163427 DOI: 10.14336/AD.2023.0312 |
0.485 |
|
| 2023 |
Deng L, Gupta V, Abyadeh M, Chitranshi N, Pushpitha K, Wu Y, Gupta V, You Y, Paulo JA, Graham SL, Mirzaei M, Haynes PA. Oxidative Stress Induced Dysfunction of Protein Synthesis in 661W Mice Photoreceptor Cells. Proteomes. 11. PMID 37092453 DOI: 10.3390/proteomes11020012 |
0.749 |
|
| 2022 |
Abdirad S, Wu Y, Ghorbanzadeh Z, Tazangi SE, Amirkhani A, Fitzhenry MJ, Kazemi M, Ghaffari MR, Koobaz P, Zeinalabedini M, Habibpourmehraban F, Masoomi-Aladizgeh F, Atwell BJ, Mirzaei M, Salekdeh GH, et al. Proteomic analysis of the meristematic root zone in contrasting genotypes reveals new insights in drought tolerance in rice. Proteomics. e2200100. PMID 35920597 DOI: 10.1002/pmic.202200100 |
0.794 |
|
| 2022 |
Mirzaei M, Abyadeh M, Turner AJ, Wall RV, Chick JM, Paulo JA, Gupta VK, Basavarajappa D, Chitranshi N, Mirshahvaladi SSO, You Y, Fitzhenry MJ, Amirkhani A, Haynes PA, Klistorner A, et al. Fingolimod effects on the brain are mediated through biochemical modulation of bioenergetics, autophagy and neuroinflammatory networks. Proteomics. e2100247. PMID 35866514 DOI: 10.1002/pmic.202100247 |
0.543 |
|
| 2022 |
Abyadeh M, Tofigh N, Hosseinian S, Hasan M, Amirkhani A, Fitzhenry MJ, Gupta V, Chitranshi N, Salekdeh GH, Haynes PA, Gupta V, Shahpasand K, Mirzaei M. Key Genes and Biochemical Networks in Various Brain Regions Affected in Alzheimer's Disease. Cells. 11. PMID 35326437 DOI: 10.3390/cells11060987 |
0.493 |
|
| 2022 |
Abdirad S, Ghaffari MR, Majd A, Irian S, Soleymaniniya A, Daryani P, Koobaz P, Shobbar ZS, Farsad LK, Yazdanpanah P, Sadri A, Mirzaei M, Ghorbanzadeh Z, Kazemi M, Hadidi N, et al. Genome-Wide Expression Analysis of Root Tips in Contrasting Rice Genotypes Revealed Novel Candidate Genes for Water Stress Adaptation. Frontiers in Plant Science. 13: 792079. PMID 35265092 DOI: 10.3389/fpls.2022.792079 |
0.538 |
|
| 2021 |
Hezavehei M, Mirzaei M, Sharafi M, Wu Y, Gupta V, Fitzhenry M, Kouchesfahani HM, Eftekhari-Yazdi P, Baharvand H, Dalman A, Haynes PA, Shahverdi A, Salekdeh GH. Proteomics study reveals the molecular mechanisms underlying cryotolerance induced by mild sublethal stress in human sperm. Cell and Tissue Research. PMID 34729646 DOI: 10.1007/s00441-021-03537-1 |
0.577 |
|
| 2021 |
Abyadeh M, Gupta V, Paulo JA, Gupta V, Chitranshi N, Godinez A, Saks D, Hasan M, Amirkhani A, McKay M, Salekdeh GH, Haynes PA, Graham SL, Mirzaei M. A Proteomic View of Cellular and Molecular Effects of Cannabis. Biomolecules. 11. PMID 34680044 DOI: 10.3390/biom11101411 |
0.528 |
|
| 2021 |
Abyadeh M, Gupta V, Chitranshi N, Gupta V, Wu Y, Saks D, Wander Wall R, Fitzhenry MJ, Basavarajappa D, You Y, Salekdeh GH, Haynes PA, Graham SL, Mirzaei M. Mitochondrial Dysfunction in Alzheimer's Disease - a Proteomics Perspective. Expert Review of Proteomics. PMID 33874826 DOI: 10.1080/14789450.2021.1918550 |
0.512 |
|
| 2021 |
Ghazizadeh Z, Fattahi F, Mirzaei M, Bayersaikhan D, Lee J, Chae S, Hwang D, Byun K, Tabar MS, Taleahmad S, Mirshahvaladi S, Shabani P, Fonoudi H, Haynes PA, Baharvand H, et al. Prospective Isolation of ISL1 Cardiac Progenitors from Human ESCs for Myocardial Infarction Therapy. Stem Cell Reports. 16: 666-668. PMID 33691147 DOI: 10.1016/j.stemcr.2021.01.012 |
0.424 |
|
| 2021 |
Deng L, Gupta VK, Wu Y, Pushpitha K, Chitranshi N, Gupta VB, Fitzhenry MJ, Moghaddam MZ, Karl T, Salekdeh GH, Graham SL, Haynes PA, Mirzaei M. Mouse model of Alzheimer's disease demonstrates differential effects of early disease pathology on various brain regions. Proteomics. e2000213. PMID 33559908 DOI: 10.1002/pmic.202000213 |
0.722 |
|
| 2020 |
Masoomi-Aladizgeh F, Najeeb U, Hamzelou S, Pascovici D, Amirkhani A, Tan DKY, Mirzaei M, Haynes PA, Atwell BJ. Pollen development in cotton (Gossypium hirsutum) is highly sensitive to heat exposure during the tetrad stage. Plant, Cell & Environment. PMID 33047317 DOI: 10.1111/pce.13908 |
0.761 |
|
| 2020 |
Gupta VB, Chitranshi N, Haan JD, Mirzaei M, You Y, Lim JK, Basavarajappa D, Godinez A, Di Angelantonio S, Sachdev P, Salekdeh GH, Bouwman F, Graham S, Gupta V. Retinal changes in Alzheimer's disease- integrated prospects of imaging, functional and molecular advances. Progress in Retinal and Eye Research. 100899. PMID 32890742 DOI: 10.1016/J.Preteyeres.2020.100899 |
0.302 |
|
| 2020 |
Mirzaei M, Gupta VK, Chitranshi N, Deng L, Pushpitha K, Abbasi M, Chick JM, Rajput R, Wu Y, McKay MJ, Salekdeh GH, Gupta VB, Haynes PA, Graham SL. Retinal proteomics of experimental glaucoma model reveal intraocular pressure-induced mediators of neurodegenerative changes. Journal of Cellular Biochemistry. PMID 32692886 DOI: 10.1002/Jcb.29822 |
0.776 |
|
| 2020 |
Mehri N, Fotovat R, Mirzaei M, Fard EM, Parsamatin P, Hasan MT, Wu Y, Ghaffari MR, Salekdeh GH. Proteomic analysis of wheat contrasting genotypes reveals the interplay between primary metabolic and regulatory pathways in anthers under drought stress. Journal of Proteomics. 103895. PMID 32652220 DOI: 10.1016/J.Jprot.2020.103895 |
0.413 |
|
| 2020 |
Wu JX, Pascovici D, Wu Y, Walker A, Mirzaei M. A workflow for rapidly extracting biological insights from complex, multi-condition proteomics experiments with WGCNA and PloGO2. Journal of Proteome Research. PMID 32407095 DOI: 10.1021/Acs.Jproteome.0C00198 |
0.379 |
|
| 2020 |
Deng L, Haynes PA, Wu Y, Amirkhani A, Kamath KS, Wu JX, Pushpitha K, Gupta V, Graham S, Gupta VK, Mirzaei M. Amyloid-beta peptide neurotoxicity in human neuronal cells is associated with modulation of insulin-like growth factor transport, lysosomal machinery and extracellular matrix receptor interactions. Neural Regeneration Research. 15: 2131-2142. PMID 32394972 DOI: 10.4103/1673-5374.282261 |
0.747 |
|
| 2020 |
Hamzelou S, Pascovici D, Kamath KS, Amirkhani A, McKay M, Mirzaei M, Atwell BJ, Haynes PA. Proteomic Responses to Drought Vary Widely Among Eight Diverse Genotypes of Rice (). International Journal of Molecular Sciences. 21. PMID 31935846 DOI: 10.3390/Ijms21010363 |
0.802 |
|
| 2020 |
Koobaz P, Reza Ghaffari M, Heidari M, Mirzaei M, Ghanati F, Amirkhani A, Mortazavi SE, Moradi F, Hajirezaei MR, Salekdeh GH. Proteomic and metabolomic analysis of desiccation tolerance in wheat young seedlings. Plant Physiology and Biochemistry : Ppb. 146: 349-362. PMID 31786507 DOI: 10.1016/J.Plaphy.2019.11.017 |
0.448 |
|
| 2020 |
Mirzaei M, Deng L, Gupta VB, Graham S, Gupta V. Complement pathway in Alzheimer's pathology and retinal neurodegenerative disorders - the road ahead. Neural Regeneration Research. 15: 257-258. PMID 31552893 DOI: 10.4103/1673-5374.265550 |
0.649 |
|
| 2019 |
Khatabi B, Gharechahi J, Ghaffari MR, Liu D, Haynes PA, McKay MJ, Mirzaei M, Salekdeh GH. Plant-microbe symbiosis: What has proteomics taught us? Proteomics. e1800105. PMID 31218790 DOI: 10.1002/Pmic.201800105 |
0.589 |
|
| 2019 |
Wu Y, Mirzaei M, Pascovici D, Haynes PA, Atwell BJ. Proteomes of leaf growing zones in rice genotypes with contrasting drought tolerance. Proteomics. e1800310. PMID 30891909 DOI: 10.1002/Pmic.201800310 |
0.648 |
|
| 2019 |
Deng L, Pushpitha K, Joseph C, Gupta V, Rajput R, Chitranshi N, Dheer Y, Amirkhani A, Kamath K, Pascovici D, Wu JX, Salekdeh GH, Haynes PA, Graham SL, Gupta VK, ... Mirzaei M, et al. Amyloid β Induces Early Changes in the Ribosomal Machinery, Cytoskeletal Organization and Oxidative Phosphorylation in Retinal Photoreceptor Cells. Frontiers in Molecular Neuroscience. 12: 24. PMID 30853886 DOI: 10.3389/Fnmol.2019.00024 |
0.745 |
|
| 2019 |
Mirzaei M, Pushpitha K, Deng L, Chitranshi N, Gupta V, Rajput R, Mangani AB, Dheer Y, Godinez A, McKay MJ, Kamath K, Pascovici D, Wu JX, Salekdeh GH, Karl T, et al. Upregulation of Proteolytic Pathways and Altered Protein Biosynthesis Underlie Retinal Pathology in a Mouse Model of Alzheimer's Disease. Molecular Neurobiology. PMID 30707393 DOI: 10.1007/S12035-019-1479-4 |
0.767 |
|
| 2019 |
Dheer Y, Chitranshi N, Gupta V, Sharma S, Pushpitha K, Abbasi M, Mirzaei M, You Y, Graham SL, Gupta V. Retinoid x receptor modulation protects against ER stress response and rescues glaucoma phenotypes in adult mice. Experimental Neurology. PMID 30703361 DOI: 10.1016/J.Expneurol.2019.01.015 |
0.31 |
|
| 2019 |
Wu Y, Mirzaei M, Atwell BJ, Haynes PA. Label-free and isobaric tandem mass tag (TMT) multiplexed quantitative proteomic data of two contrasting rice cultivars exposed to drought stress and recovery. Data in Brief. 22: 697-702. PMID 30656201 DOI: 10.1016/J.Dib.2018.12.041 |
0.628 |
|
| 2019 |
Rahiminejad M, Ledari MT, Mirzaei M, Ghorbanzadeh Z, Kavousi K, Ghaffari MR, Haynes PA, Komatsu S, Salekdeh GH. The Quest for Missing Proteins in Rice. Molecular Plant. 12: 4-6. PMID 30543994 DOI: 10.1016/J.Molp.2018.11.009 |
0.621 |
|
| 2019 |
Maher T, Mirzaei M, Pascovici D, Wright IJ, Haynes PA, Gallagher RV. Evidence from the proteome for local adaptation to extreme heat in a widespread tree species Functional Ecology. 33: 436-446. DOI: 10.1111/1365-2435.13260 |
0.523 |
|
| 2019 |
Gupta VK, Chitranshi N, Thananthirige KPM, Gupta VB, Mirzaei M, Graham S. P3-199: Ptpn11 Is Involved In Regulating Tau Protein Phosphorylation In The Retina Alzheimers & Dementia. 15. DOI: 10.1016/J.Jalz.2019.06.3228 |
0.314 |
|
| 2019 |
Gharechahi J, Sharifi G, Mirzaei M, Zeinalabedini M, Salekdeh GH. Abiotic stress responsive microRNome and proteome: How correlated are they? Environmental and Experimental Botany. 165: 150-160. DOI: 10.1016/J.Envexpbot.2019.05.014 |
0.337 |
|
| 2019 |
Ghaffari MR, Mirzaei M, Ghabooli M, Khatabi B, Wu Y, Zabet-Moghaddam M, Mohammadi-Nejad G, Haynes PA, Hajirezaei MR, Sepehri M, Salekdeh GH. Root endophytic fungus Piriformospora indica improves drought stress adaptation in barley by metabolic and proteomic reprogramming Environmental and Experimental Botany. 157: 197-210. DOI: 10.1016/J.Envexpbot.2018.10.002 |
0.608 |
|
| 2019 |
Hasan MT, Sun A, Khatiwada B, McQuade L, Mirzaei M, Te'o J, Hobba G, Sunna A, Nevalainen H. Comparative proteomics investigation of central carbon metabolism in Euglena gracilis grown under predominantly phototrophic, mixotrophic and heterotrophic cultivations Algal Research-Biomass Biofuels and Bioproducts. 43: 101638. DOI: 10.1016/J.Algal.2019.101638 |
0.336 |
|
| 2019 |
Khatabi B, Gharechahi J, Ghaffari MR, Liu D, Haynes PA, McKay MJ, Mirzaei M, Salekdeh GH. Front Cover: Plant–Microbe Symbiosis: What Has Proteomics Taught Us? Proteomics. 19: 1970141. DOI: 10.1002/Pmic.201970141 |
0.593 |
|
| 2019 |
Wu Y, Mirzaei M, Pascovici D, Haynes PA, Atwell BJ. Front Cover: Proteomes of Leaf‐Growing Zones in Rice Genotypes with Contrasting Drought Tolerance Proteomics. 19: 1970071. DOI: 10.1002/Pmic.201970071 |
0.573 |
|
| 2018 |
Pascovici D, Wu JX, McKay MJ, Joseph C, Noor Z, Kamath K, Wu Y, Ranganathan S, Gupta V, Mirzaei M. Clinically Relevant Post-Translational Modification Analyses-Maturing Workflows and Bioinformatics Tools. International Journal of Molecular Sciences. 20. PMID 30577541 DOI: 10.3390/Ijms20010016 |
0.404 |
|
| 2018 |
Shekari F, Han CL, Lee J, Mirzaei M, Gupta V, Haynes PA, Lee B, Baharvand H, Chen YJ, Hosseini Salekdeh G. Surface markers of human embryonic stem cells: a meta analysis of membrane proteomics reports. Expert Review of Proteomics. PMID 30358457 DOI: 10.1080/14789450.2018.1539669 |
0.59 |
|
| 2018 |
Handler D, Pascovici D, Mirzaei M, Gupta V, Salekdeh GH, Haynes PA. The Art of validating quantitative proteomics data. Proteomics. e1800222. PMID 30352137 DOI: 10.1002/Pmic.201800222 |
0.753 |
|
| 2018 |
Chitranshi N, Dheer Y, Mirzaei M, Wu Y, Salekdeh GH, Abbasi M, Gupta V, Vander Wall R, You Y, Graham SL, Gupta V. Loss of Shp2 Rescues BDNF/TrkB Signaling and Contributes to Improved Retinal Ganglion Cell Neuroprotection. Molecular Therapy : the Journal of the American Society of Gene Therapy. PMID 30341011 DOI: 10.1016/J.Ymthe.2018.09.019 |
0.303 |
|
| 2018 |
Fathi A, Mirzaei M, Dolatyar B, Sharifitabar M, Bayat M, Shahbazi E, Lee J, Javan M, Zhang SC, Gupta V, Lee B, Haynes PA, Baharvand H, Salekdeh GH. Discovery of Novel Cell Surface Markers for Purification of Embryonic Dopamine progenitors for Transplantation in Parkinson's Disease Animal Models. Molecular & Cellular Proteomics : McP. PMID 29848781 DOI: 10.1074/Mcp.Ra118.000809 |
0.558 |
|
| 2018 |
Emery SJ, Baker L, Ansell BRE, Mirzaei M, Haynes PA, McConville MJ, Svärd SG, Jex AR. Differential protein expression and post-translational modifications in metronidazole-resistant Giardia duodenalis. Gigascience. 7. PMID 29688452 DOI: 10.1093/Gigascience/Giy024 |
0.756 |
|
| 2018 |
Dheer Y, Chitranshi N, Gupta V, Abbasi M, Mirzaei M, You Y, Chung R, Graham SL, Gupta V. Bexarotene Modulates Retinoid-X-Receptor Expression and Is Protective Against Neurotoxic Endoplasmic Reticulum Stress Response and Apoptotic Pathway Activation. Molecular Neurobiology. PMID 29637440 DOI: 10.1007/S12035-018-1041-9 |
0.327 |
|
| 2018 |
Ghazizadeh Z, Fattahi F, Mirzaei M, Bayersaikhan D, Lee J, Chae S, Hwang D, Byun K, Tabar MS, Taleahmad S, Mirshahvaladi S, Shabani P, Fonoudi H, Haynes PA, Baharvand H, et al. Prospective Isolation of ISL1Cardiac Progenitors from Human ESCs for Myocardial Infarction Therapy. Stem Cell Reports. PMID 29503094 DOI: 10.1016/J.Stemcr.2018.01.037 |
0.526 |
|
| 2018 |
Hezavehei M, Kouchesfahani HM, Salekdeh GH, Mirzaei M, Sharafi M, Eftekhari-Yazdi P, Tobraggaleh TR, Shahverdi A. Stress Preconditioning of Sperm for Cryopreservation: New Approach Based on Proteomics Characteristics Cryobiology. 80: 190. DOI: 10.1016/J.Cryobiol.2017.10.142 |
0.31 |
|
| 2017 |
Mirzaei M, Gupta VB, Chick JM, Greco TM, Wu Y, Chitranshi N, Wall RV, Hone E, Deng L, Dheer Y, Abbasi M, Rezaeian M, Braidy N, You Y, Salekdeh GH, et al. Age-related neurodegenerative disease associated pathways identified in retinal and vitreous proteome from human glaucoma eyes. Scientific Reports. 7: 12685. PMID 28978942 DOI: 10.1038/S41598-017-12858-7 |
0.77 |
|
| 2017 |
Chitranshi N, Dheer Y, Gupta V, Abbasi M, Mirzaei M, You Y, Chung R, Graham SL, Gupta V. PTPN11 induces endoplasmic stress and apoptosis in SH-SY5Y cells. Neuroscience. PMID 28947394 DOI: 10.1016/J.Neuroscience.2017.09.028 |
0.314 |
|
| 2017 |
Taleahmad S, Mirzaei M, Samadian A, Hassani SN, Haynes PA, Salekdeh GH, Baharvand H. Low Focal Adhesion Signaling Promotes Ground State Pluripotency of Mouse Embryonic Stem Cells. Journal of Proteome Research. 16: 3585-3595. PMID 28850235 DOI: 10.1021/Acs.Jproteome.7B00322 |
0.556 |
|
| 2017 |
Alikhani M, Mirzaei M, Sabbaghian M, Parsamatin P, Karamzadeh R, Adib S, Sodeifi N, Gilani MA, Zabet-Moghaddam M, Parker L, Wo Y, Gupta V, Haynes PA, Gourabi H, Baharvand H, et al. Quantitative proteomic analysis of human testis reveals system-wide molecular and cellular pathways associated with non-obstructive azoospermia. Journal of Proteomics. PMID 28213128 DOI: 10.1016/J.Jprot.2017.02.007 |
0.622 |
|
| 2017 |
Mirzaei M, Pascovici D, Wu JX, Chick J, Wu Y, Cooke B, Haynes P, Molloy MP. TMT One-Stop Shop: From Reliable Sample Preparation to Computational Analysis Platform. Methods in Molecular Biology (Clifton, N.J.). 1549: 45-66. PMID 27975283 DOI: 10.1007/978-1-4939-6740-7_5 |
0.565 |
|
| 2017 |
Fotovat R, Alikhani M, Valizadeh M, Mirzaei M, Salekdeh GH. A Proteomics Approach to Discover Drought Tolerance Proteins in Wheat Pollen Grain at Meiosis Stage. Protein and Peptide Letters. 24: 26-36. PMID 27908260 DOI: 10.2174/0929866523666161130143446 |
0.421 |
|
| 2017 |
Hasan MT, Sun A, Mirzaei M, Te'o J, Hobba G, Sunna A, Nevalainen H. A comprehensive assessment of the biosynthetic pathways of ascorbate, alpha-tocopherol and free amino acids in Euglena gracilis var. saccharophila Algal Research-Biomass Biofuels and Bioproducts. 27: 140-151. DOI: 10.1016/J.Algal.2017.08.029 |
0.3 |
|
| 2016 |
Jones J, Mirzaei M, Ravishankar P, Xavier D, Lim DS, Shin DH, Bianucci R, Haynes PA. Identification of proteins from 4200-year-old skin and muscle tissue biopsies from ancient Egyptian mummies of the first intermediate period shows evidence of acute inflammation and severe immune response. Philosophical Transactions. Series a, Mathematical, Physical, and Engineering Sciences. 374. PMID 27644972 DOI: 10.1098/Rsta.2015.0373 |
0.773 |
|
| 2016 |
Franklin JL, Mirzaei M, Wearne TA, Homewood J, Goodchild AK, Haynes PA, Cornish JL. Extended exposure to sugar and/or caffeine produces distinct behavioral and neurochemical profiles in the orbitofrontal cortex of rats: Implications for neural function. Proteomics. PMID 27588558 DOI: 10.1002/Pmic.201600032 |
0.572 |
|
| 2016 |
Wu Y, Mirzaei M, Pascovici D, Chick JM, Atwell BJ, Haynes PA. Quantitative proteomic analysis of two different rice varieties reveals that drought tolerance is correlated with reduced abundance of photosynthetic machinery and increased abundance of ClpD1 protease. Journal of Proteomics. PMID 27195813 DOI: 10.1016/J.Jprot.2016.05.014 |
0.631 |
|
| 2016 |
Mousavi SA, Pouya FM, Ghaffari MR, Mirzaei M, Ghaffari A, Alikhani M, Ghareyazie M, Komatsu S, Haynes PA, Salekdeh GH. PlantPReS: A database for plant proteome response to stress. Journal of Proteomics. PMID 26947550 DOI: 10.1016/J.Jprot.2016.03.009 |
0.618 |
|
| 2016 |
Franklin JL, Mirzaei M, Wearne TA, Homewood J, Goodchild AK, Haynes PA, Cornish JL. Quantitative proteomic analysis of the orbital frontal cortex in rats following extended exposure to caffeine reveals extensive changes to protein expression: implications for neurological disease. Journal of Proteome Research. PMID 26941107 DOI: 10.1021/Acs.Jproteome.5B01043 |
0.601 |
|
| 2016 |
Emery SJ, Mirzaei M, Vuong D, Pascovici D, Chick JM, Lacey E, Haynes PA. Induction of virulence factors in Giardia duodenalis independent of host attachment. Scientific Reports. 6: 20765. PMID 26867958 DOI: 10.1038/Srep20765 |
0.769 |
|
| 2016 |
Emery SJ, Mirzaei M, Vuong D, Pascovici D, Chick JM, Lacey E, Haynes PA. Induction of virulence factors in giardia duodenalis independent of host attachment Scientific Reports. 6. DOI: 10.1038/srep20765 |
0.745 |
|
| 2015 |
Abdollah Hosseini S, Gharechahi J, Heidari M, Koobaz P, Abdollahi S, Mirzaei M, Nakhoda B, Hosseini Salekdeh G. Comparative proteomic and physiological characterisation of two closely related rice genotypes with contrasting responses to salt stress. Functional Plant Biology : Fpb. 42: 527-542. PMID 32480698 DOI: 10.1071/Fp14274 |
0.396 |
|
| 2015 |
Taleahmad S, Mirzaei M, Parker LM, Hassani SN, Mollamohammadi S, Sharifi-Zarchi A, Haynes PA, Baharvand H, Salekdeh GH. Proteome Analysis of Ground State Pluripotency. Scientific Reports. 5: 17985. PMID 26671762 DOI: 10.1038/Srep17985 |
0.612 |
|
| 2015 |
Franklin JL, Mirzaei M, Wearne TA, Sauer MK, Homewood J, Goodchild AK, Haynes PA, Cornish JL. Quantitative shotgun proteomics reveals extensive changes to the proteome of the orbitofrontal cortex in rats that are hyperactive following withdrawal from a high sugar diet. Proteomics. PMID 26621205 DOI: 10.1002/Pmic.201500126 |
0.604 |
|
| 2015 |
Kaufman K, Jenkins Y, Alomari M, Mirzaei M, Best O, Pascovici D, Mactier S, Mulligan S, Haynes P, Christopherson RI. The Hsp90 inhibitor SNX-7081 is synergistic with fludarabine nucleoside via DNA damage and repair mechanisms in human, p53-negative chronic lymphocytic leukemia. Oncotarget. PMID 26556860 DOI: 10.18632/Oncotarget.5715 |
0.544 |
|
| 2015 |
Pascovici D, Song X, Solomon PS, Winterberg B, Mirzaei M, Goodchild A, Stanley WC, Liu J, Molloy MP. Correction to "Combining Protein Ratio p-Values as a Pragmatic Approach to the Analysis of Multirun iTRAQ Experiments". Journal of Proteome Research. PMID 26448159 DOI: 10.1021/Acs.Jproteome.5B00897 |
0.336 |
|
| 2015 |
Faghani E, Gharechahi J, Komatsu S, Mirzaei M, Ali Khavarinejad R, Najafi F, Karimi Farsad L, Salekdeh GH. Data in support of comparative physiology and proteomic analysis of two wheat genotypes contrasting in drought tolerance. Data in Brief. 2: 26-8. PMID 26217700 DOI: 10.1016/J.Dib.2014.11.001 |
0.452 |
|
| 2015 |
Jangravi Z, Tabar MS, Mirzaei M, Parsamatin P, Vakilian H, Alikhani M, Shabani M, Haynes PA, Goodchild AK, Gourabi H, Baharvand H, Salekdeh GH. Two Splice Variants of Y Chromosome-Located Lysine-Specific Demethylase 5D Have Distinct Function in Prostate Cancer Cell Line (DU-145). Journal of Proteome Research. 14: 3492-502. PMID 26215926 DOI: 10.1021/Acs.Jproteome.5B00333 |
0.595 |
|
| 2015 |
Vakilian H, Mirzaei M, Sharifi Tabar M, Pooyan P, Habibi Rezaee L, Parker L, Haynes PA, Gourabi H, Baharvand H, Salekdeh GH. DDX3Y, a Male-Specific Region of Y Chromosome Gene, May Modulate Neuronal Differentiation. Journal of Proteome Research. 14: 3474-83. PMID 26144214 DOI: 10.1021/Acs.Jproteome.5B00512 |
0.575 |
|
| 2015 |
Chakraborty S, Salekdeh GH, Yang P, Woo SH, Chin CF, Gehring C, Haynes PA, Mirzaei M, Komatsu S. Proteomics of Important Food Crops in the Asia Oceania Region: Current Status and Future Perspectives. Journal of Proteome Research. 14: 2723-44. PMID 26035454 DOI: 10.1021/Acs.Jproteome.5B00211 |
0.536 |
|
| 2015 |
George IS, Pascovici D, Mirzaei M, Haynes PA. Quantitative proteomic analysis of cabernet sauvignon grape cells exposed to thermal stresses reveals alterations in sugar and phenylpropanoid metabolism. Proteomics. 15: 3048-60. PMID 25959233 DOI: 10.1002/Pmic.201400541 |
0.73 |
|
| 2015 |
Pascovici D, Song X, Solomon PS, Winterberg B, Mirzaei M, Goodchild A, Stanley WC, Liu J, Molloy MP. Combining protein ratio p-values as a pragmatic approach to the analysis of multirun iTRAQ experiments. Journal of Proteome Research. 14: 738-46. PMID 25495031 DOI: 10.1021/Pr501091E |
0.386 |
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| 2015 |
Faghani E, Gharechahi J, Komatsu S, Mirzaei M, Khavarinejad RA, Najafi F, Farsad LK, Salekdeh GH. Comparative physiology and proteomic analysis of two wheat genotypes contrasting in drought tolerance. Journal of Proteomics. 114: 1-15. PMID 25449836 DOI: 10.1016/J.Jprot.2014.10.018 |
0.39 |
|
| 2015 |
Wearne TA, Mirzaei M, Franklin JL, Goodchild AK, Haynes PA, Cornish JL. Methamphetamine-induced sensitization is associated with alterations to the proteome of the prefrontal cortex: implications for the maintenance of psychotic disorders. Journal of Proteome Research. 14: 397-410. PMID 25245100 DOI: 10.1021/Pr500719F |
0.584 |
|
| 2015 |
Percy AJ, Tamura-Wells J, Albar JP, Aloria K, Amirkhani A, Araujo GDT, Arizmendi JM, Blanco FJ, Canals F, Cho JY, Colomé-Calls N, Corrales FJ, Domont G, Espadas G, Fernandez-Puente P, ... ... Mirzaei M, et al. Inter-laboratory evaluation of instrument platforms and experimental workflows for quantitative accuracy and reproducibility assessment Eupa Open Proteomics. 8: 6-15. DOI: 10.1016/J.Euprot.2015.06.001 |
0.557 |
|
| 2015 |
Goodchild AK, Bokiniec P, Hassan SF, Haynes P, Parker LM, Wall RV, Moghaddam M, Mirzaei M. Molecular changes in the adrenal medulla and brain following glucoprivation Autonomic Neuroscience: Basic and Clinical. 192: 45-46. DOI: 10.1016/J.Autneu.2015.07.394 |
0.515 |
|
| 2014 |
Mirzaei M, Soltani N, Sarhadi E, George IS, Neilson KA, Pascovici D, Shahbazian S, Haynes PA, Atwell BJ, Salekdeh GH. Manipulating root water supply elicits major shifts in the shoot proteome. Journal of Proteome Research. 13: 517-26. PMID 24266738 DOI: 10.1021/Pr400696U |
0.792 |
|
| 2014 |
Neilson KA, George IS, Emery SJ, Muralidharan S, Mirzaei M, Haynes PA. Analysis of rice proteins using SDS-PAGE shotgun proteomics. Methods in Molecular Biology (Clifton, N.J.). 1072: 289-302. PMID 24136530 DOI: 10.1007/978-1-62703-631-3_21 |
0.757 |
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| 2013 |
Ghabooli M, Khatabi B, Ahmadi FS, Sepehri M, Mirzaei M, Amirkhani A, Jorrín-Novo JV, Salekdeh GH. Proteomics study reveals the molecular mechanisms underlying water stress tolerance induced by Piriformospora indica in barley. Journal of Proteomics. 94: 289-301. PMID 24120527 DOI: 10.1016/J.Jprot.2013.09.017 |
0.37 |
|
| 2013 |
Kottapalli KR, Zabet-Moghaddam M, Rowland D, Faircloth W, Mirzaei M, Haynes PA, Payton P. Shotgun label-free quantitative proteomics of water-deficit-stressed midmature peanut (Arachis hypogaea L.) seed. Journal of Proteome Research. 12: 5048-57. PMID 24094305 DOI: 10.1021/Pr400936D |
0.628 |
|
| 2013 |
Francis HM, Mirzaei M, Pardey MC, Haynes PA, Cornish JL. Proteomic analysis of the dorsal and ventral hippocampus of rats maintained on a high fat and refined sugar diet. Proteomics. 13: 3076-91. PMID 23963966 DOI: 10.1002/Pmic.201300124 |
0.61 |
|
| 2013 |
Jangravi Z, Alikhani M, Arefnezhad B, Sharifi Tabar M, Taleahmad S, Karamzadeh R, Jadaliha M, Mousavi SA, Ahmadi Rastegar D, Parsamatin P, Vakilian H, Mirshahvaladi S, Sabbaghian M, Mohseni Meybodi A, Mirzaei M, et al. A fresh look at the male-specific region of the human Y chromosome. Journal of Proteome Research. 12: 6-22. PMID 23253012 DOI: 10.1021/Pr300864K |
0.576 |
|
| 2013 |
Monavarfeshani A, Mirzaei M, Sarhadi E, Amirkhani A, Khayam Nekouei M, Haynes PA, Mardi M, Salekdeh GH. Shotgun proteomic analysis of the Mexican lime tree infected with "CandidatusPhytoplasma aurantifolia". Journal of Proteome Research. 12: 785-95. PMID 23244174 DOI: 10.1021/Pr300865T |
0.613 |
|
| 2013 |
Franklin JL, Mirzaei M, Sauer MK, Wearne TA, Goodchild AK, Haynes PA, Cornish JL. P.6.c.005 Exposure to caffeine and sucrose changes locomotor behaviour, neurobiology and response to acute methamphetamine challenge European Neuropsychopharmacology. 23. DOI: 10.1016/S0924-977X(13)70903-9 |
0.506 |
|
| 2012 |
Mirzaei M, Pascovici D, Atwell BJ, Haynes PA. Differential regulation of aquaporins, small GTPases and V-ATPases proteins in rice leaves subjected to drought stress and recovery. Proteomics. 12: 864-77. PMID 22539437 DOI: 10.1002/Pmic.201100389 |
0.621 |
|
| 2012 |
Pascovici D, Keighley T, Mirzaei M, Haynes PA, Cooke B. PloGO: plotting gene ontology annotation and abundance in multi-condition proteomics experiments. Proteomics. 12: 406-10. PMID 22213732 DOI: 10.1002/Pmic.201100445 |
0.601 |
|
| 2012 |
Mirzaei M, Soltani N, Sarhadi E, Pascovici D, Keighley T, Salekdeh GH, Haynes PA, Atwell BJ. Shotgun proteomic analysis of long-distance drought signaling in rice roots. Journal of Proteome Research. 11: 348-58. PMID 22047206 DOI: 10.1021/Pr2008779 |
0.621 |
|
| 2012 |
Che Y, Mirzaei M, Best G, Zhong L, Raftery M, Mulligan SP, Haynes PA, Christopherson RI. Proteomic analysis of drug synergy between the Hsp90 inhibitor SNX7081 and fludarabine F1000research. 3. DOI: 10.7490/F1000Research.1089917.1 |
0.527 |
|
| 2011 |
Neilson KA, Ali NA, Muralidharan S, Mirzaei M, Mariani M, Assadourian G, Lee A, Van Sluyter SC, Haynes PA. Less label, more free: Approaches in label-free quantitative mass spectrometry Proteomics. 11: 535-553. PMID 21243637 DOI: 10.1002/Pmic.201000553 |
0.734 |
|
| 2011 |
Mirzaei M, Pascovici D, Keighley T, George I, Voelckel C, Heenan PB, Haynes PA. Shotgun proteomic profiling of five species of New Zealand Pachycladon. Proteomics. 11: 166-71. PMID 21182204 DOI: 10.1002/Pmic.200900816 |
0.712 |
|
| 2011 |
Che Y, Best G, Mirzaei M, Pascovici D, Haynes PA, Mulligan S, Christopherson RI. 5.26 Hsp90 Inhibitor Restores P53-Mutated MEC1 Chronic Lymphocytic Leukemia Cell Sensitivity to Fludarabine by Downregulating DNA Repair and Endoplasmic Reticulum Chaperone Proteins Clinical Lymphoma Myeloma and Leukemia. 11: S260-S261. DOI: 10.1016/J.Clml.2011.09.180 |
0.539 |
|
| 2010 |
Voelckel C, Mirzaei M, Reichelt M, Luo Z, Pascovici D, Heenan PB, Schmidt S, Janssen B, Haynes PA, Lockhart PJ. Transcript and protein profiling identify candidate gene sets of potential adaptive significance in New Zealand Pachycladon. Bmc Evolutionary Biology. 10: 151. PMID 20482888 DOI: 10.1186/1471-2148-10-151 |
0.563 |
|
| 2010 |
Neilson KA, Gammulla CG, Mirzaei M, Imin N, Haynes PA. Proteomic analysis of temperature stress in plants. Proteomics. 10: 828-45. PMID 19953552 DOI: 10.1002/Pmic.200900538 |
0.791 |
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