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Caghan Kizil, PhD, MSc, habil. - Publications

Affiliations: 
2005-2009 Genetics Max Planck Institute for Developmental Biology, Tübingen, Baden-Württemberg, Germany 
 2009-2013 CRTD Technische Universität Dresden, Dresden, Sachsen, Germany 
 2014-2022 AG Kizil German Center for Neurodegenerative Diseases (DZNE) 
 2022- Neurology/Taub Institute Columbia University Medical Center, New York 
Area:
neuroscience, regeneration, zebrafish, stem cell
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33 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2022 Cosacak MI, Bhattarai P, De Jager PL, Menon V, Tosto G, Kizil C. Single Cell/Nucleus Transcriptomics Comparison in Zebrafish and Humans Reveals Common and Distinct Molecular Responses to Alzheimer's Disease. Cells. 11. PMID 35681503 DOI: 10.3390/cells11111807  0.33
2021 Siddiqui T, Bhattarai P, Popova S, Cosacak MI, Sariya S, Zhang Y, Mayeux R, Tosto G, Kizil C. KYNA/Ahr Signaling Suppresses Neural Stem Cell Plasticity and Neurogenesis in Adult Zebrafish Model of Alzheimer's Disease. Cells. 10. PMID 34685728 DOI: 10.3390/cells10102748  0.461
2021 D'Gama PP, Qiu T, Cosacak MI, Rayamajhi D, Konac A, Hansen JN, Ringers C, Acuña-Hinrichsen F, Hui SP, Olstad EW, Chong YL, Lim CKA, Gupta A, Ng CP, Nilges BS, ... ... Kizil C, et al. Diversity and function of motile ciliated cell types within ependymal lineages of the zebrafish brain. Cell Reports. 37: 109775. PMID 34610312 DOI: 10.1016/j.celrep.2021.109775  0.716
2020 Fore S, Acuña-Hinrichsen F, Mutlu KA, Bartoszek EM, Serneels B, Faturos NG, Chau KTP, Cosacak MI, Verdugo CD, Palumbo F, Ringers C, Jurisch-Yaksi N, Kizil C, Yaksi E. Functional properties of habenular neurons are determined by developmental stage and sequential neurogenesis. Science Advances. 6. PMID 32917624 DOI: 10.1126/Sciadv.Aaz3173  0.712
2020 Jurisch-Yaksi N, Yaksi E, Kizil C. Radial glia in the zebrafish brain: Functional, structural, and physiological comparison with the mammalian glia. Glia. PMID 32476207 DOI: 10.1002/Glia.23849  0.744
2020 Mashkaryan V, Siddiqui T, Popova S, Cosacak MI, Bhattarai P, Brandt K, Govindarajan N, Petzold A, Reinhardt S, Dahl A, Lefort R, Kizil C. Type 1 Interleukin-4 Signaling Obliterates Mouse Astroglia but Not . Frontiers in Cell and Developmental Biology. 8: 114. PMID 32181251 DOI: 10.3389/Fcell.2020.00114  0.707
2020 Bhattarai P, Cosacak MI, Mashkaryan V, Demir S, Popova SD, Govindarajan N, Brandt K, Zhang Y, Chang W, Ampatzis K, Kizil C. Neuron-glia interaction through Serotonin-BDNF-NGFR axis enables regenerative neurogenesis in Alzheimer's model of adult zebrafish brain. Plos Biology. 18: e3000585. PMID 31905199 DOI: 10.1371/Journal.Pbio.3000585  0.562
2020 Cosacak MI, Bhattarai P, Kizil C. Alzheimer's disease, neural stem cells and neurogenesis: cellular phase at single-cell level. Neural Regeneration Research. 15: 824-827. PMID 31719242 DOI: 10.4103/1673-5374.268896  0.46
2019 Diaz Verdugo C, Myren-Svelstad S, Aydin E, Van Hoeymissen E, Deneubourg C, Vanderhaeghe S, Vancraeynest J, Pelgrims R, Cosacak MI, Muto A, Kizil C, Kawakami K, Jurisch-Yaksi N, Yaksi E. Glia-neuron interactions underlie state transitions to generalized seizures. Nature Communications. 10: 3830. PMID 31444362 DOI: 10.1038/S41467-019-11739-Z  0.675
2019 Cosacak MI, Bhattarai P, Reinhardt S, Petzold A, Dahl A, Zhang Y, Kizil C. Single-Cell Transcriptomics Analyses of Neural Stem Cell Heterogeneity and Contextual Plasticity in a Zebrafish Brain Model of Amyloid Toxicity. Cell Reports. 27: 1307-1318.e3. PMID 31018142 DOI: 10.1016/J.Celrep.2019.03.090  0.56
2019 Celikkaya H, Cosacak MI, Papadimitriou C, Popova S, Bhattarai P, Biswas SN, Siddiqui T, Wistorf S, Nevado-Alcalde I, Naumann L, Mashkaryan V, Brandt K, Freudenberg U, Werner C, Kizil C. GATA3 Promotes the Neural Progenitor State but Not Neurogenesis in 3D Traumatic Injury Model of Primary Human Cortical Astrocytes. Frontiers in Cellular Neuroscience. 13: 23. PMID 30809125 DOI: 10.3389/Fncel.2019.00023  0.535
2019 Reinhardt L, Kordes S, Reinhardt P, Glatza M, Baumann M, Drexler HCA, Menninger S, Zischinsky G, Eickhoff J, Fröb C, Bhattarai P, Arulmozhivarman G, Marrone L, Janosch A, Adachi K, ... ... Kizil C, et al. Dual Inhibition of GSK3β and CDK5 Protects the Cytoskeleton of Neurons from Neuroinflammatory-Mediated Degeneration In Vitro and In Vivo. Stem Cell Reports. PMID 30773488 DOI: 10.1016/J.Stemcr.2019.01.015  0.437
2018 Kizil C, Bhattarai P. Is Alzheimer's Also a Stem Cell Disease? - The Zebrafish Perspective. Frontiers in Cell and Developmental Biology. 6: 159. PMID 30533414 DOI: 10.3389/Fcell.2018.00159  0.495
2018 Papadimitriou C, Celikkaya H, Cosacak MI, Mashkaryan V, Bray L, Bhattarai P, Brandt K, Hollak H, Chen X, He S, Antos CL, Lin W, Thomas AK, Dahl A, Kurth T, ... ... Kizil C, et al. 3D Culture Method for Alzheimer's Disease Modeling Reveals Interleukin-4 Rescues Aβ42-Induced Loss of Human Neural Stem Cell Plasticity. Developmental Cell. 46: 85-101.e8. PMID 29974866 DOI: 10.1016/J.Devcel.2018.06.005  0.462
2018 Kizil C. Mechanisms of Pathology-Induced Neural Stem Cell Plasticity and Neural Regeneration in Adult Zebrafish Brain. Current Pathobiology Reports. 6: 71-77. PMID 29938129 DOI: 10.1007/S40139-018-0158-X  0.553
2017 Bhattarai P, Thomas AK, Cosacak MI, Papadimitriou C, Mashkaryan V, Zhang Y, Kizil C. Modeling Amyloid-β42 Toxicity and Neurodegeneration in Adult Zebrafish Brain. Journal of Visualized Experiments : Jove. PMID 29155703 DOI: 10.3791/56014  0.519
2017 Cosacak MI, Bhattarai P, Bocova L, Dzewas T, Mashkaryan V, Papadimitriou C, Brandt K, Hollak H, Antos CL, Kizil C. Human TAU(P301L) overexpression results in TAU hyperphosphorylation without neurofibrillary tangles in adult zebrafish brain. Scientific Reports. 7: 12959. PMID 29021554 DOI: 10.1038/S41598-017-13311-5  0.468
2016 Bhattarai P, Thomas AK, Cosacak MI, Papadimitriou C, Mashkaryan V, Froc C, Reinhardt S, Kurth T, Dahl A, Zhang Y, Kizil C. IL4/STAT6 Signaling Activates Neural Stem Cell Proliferation and Neurogenesis upon Amyloid-β42 Aggregation in Adult Zebrafish Brain. Cell Reports. 17: 941-948. PMID 27760324 DOI: 10.1016/J.Celrep.2016.09.075  0.544
2016 Tincer G, Mashkaryan V, Bhattarai P, Kizil C. Neural stem/progenitor cells in Alzheimer's disease. The Yale Journal of Biology and Medicine. 89: 23-35. PMID 27505014  0.437
2015 Cosacak MI, Papadimitriou C, Kizil C. Regeneration, Plasticity, and Induced Molecular Programs in Adult Zebrafish Brain. Biomed Research International. 2015: 769763. PMID 26417601 DOI: 10.1155/2015/769763  0.547
2015 Kizil C, Iltzsche A, Thomas AK, Bhattarai P, Zhang Y, Brand M. Efficient Cargo Delivery into Adult Brain Tissue Using Short Cell-Penetrating Peptides. Plos One. 10: e0124073. PMID 25894337 DOI: 10.1371/Journal.Pone.0124073  0.685
2015 Kizil C, Kyritsis N, Brand M. Effects of inflammation on stem cells: together they strive? Embo Reports. 16: 416-26. PMID 25739812 DOI: 10.15252/Embr.201439702  0.637
2014 Kizil C, Küchler B, Yan JJ, Özhan G, Moro E, Argenton F, Brand M, Weidinger G, Antos CL. Simplet/Fam53b is required for Wnt signal transduction by regulating β-catenin nuclear localization. Development (Cambridge, England). 141: 3529-39. PMID 25183871 DOI: 10.1242/Jcs.162701  0.603
2014 Kyritsis N, Kizil C, Brand M. Neuroinflammation and central nervous system regeneration in vertebrates. Trends in Cell Biology. 24: 128-35. PMID 24029244 DOI: 10.1016/J.Tcb.2013.08.004  0.676
2013 Altindis E, Alpar MA, Aksay E, Beckwith J, Bökel C, Curl RF, Darnell RB, Elledge SJ, Erman B, Frahm J, Goff SP, Greengard P, Hoffmann R, Ilhan B, Kaslin J, ... ... Kizil C, et al. Turkey must end violent response to protests. Science (New York, N.Y.). 341: 236. PMID 23869001 DOI: 10.1126/Science.341.6143.236-A  0.703
2013 Kizil C, Iltzsche A, Kaslin J, Brand M. Micromanipulation of gene expression in the adult zebrafish brain using cerebroventricular microinjection of morpholino oligonucleotides. Journal of Visualized Experiments : Jove. e50415. PMID 23728426 DOI: 10.3791/50415  0.682
2012 Kizil C, Kyritsis N, Dudczig S, Kroehne V, Freudenreich D, Kaslin J, Brand M. Regenerative neurogenesis from neural progenitor cells requires injury-induced expression of Gata3. Developmental Cell. 23: 1230-7. PMID 23168169 DOI: 10.1016/J.Devcel.2012.10.014  0.699
2012 Kyritsis N, Kizil C, Zocher S, Kroehne V, Kaslin J, Freudenreich D, Iltzsche A, Brand M. Acute inflammation initiates the regenerative response in the adult zebrafish brain. Science (New York, N.Y.). 338: 1353-6. PMID 23138980 DOI: 10.1126/Science.1228773  0.713
2012 Kizil C, Dudczig S, Kyritsis N, Machate A, Blaesche J, Kroehne V, Brand M. The chemokine receptor cxcr5 regulates the regenerative neurogenesis response in the adult zebrafish brain. Neural Development. 7: 27. PMID 22824261 DOI: 10.1186/1749-8104-7-27  0.726
2012 Kizil C, Kaslin J, Kroehne V, Brand M. Adult neurogenesis and brain regeneration in zebrafish. Developmental Neurobiology. 72: 429-61. PMID 21595047 DOI: 10.1002/Dneu.20918  0.726
2011 Kizil C, Brand M. Cerebroventricular microinjection (CVMI) into adult zebrafish brain is an efficient misexpression method for forebrain ventricular cells. Plos One. 6: e27395. PMID 22076157 DOI: 10.1371/Journal.Pone.0027395  0.701
2009 Kizil C, Otto GW, Geisler R, Nüsslein-Volhard C, Antos CL. Simplet controls cell proliferation and gene transcription during zebrafish caudal fin regeneration. Developmental Biology. 325: 329-40. PMID 19014929 DOI: 10.1016/J.Ydbio.2008.09.032  0.692
2009 Kizil C, Otto G, Geisler R, Nüsslein-Volhard C, Antos C. 19-P017 Simplet controls cell proliferation and gene transcription during zebrafish caudal fin regeneration Mechanisms of Development. 126. DOI: 10.1016/J.Mod.2009.06.805  0.415
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