Andrew A. Whitehead - Publications

Affiliations: 
Environmental Toxicology University of California, Davis, Davis, CA 

44/77 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2024 Miller JT, Clark BW, Reid NM, Karchner SI, Roach JL, Hahn ME, Nacci D, Whitehead A. Independently evolved pollution resistance in four killifish populations is largely explained by few variants of large effect. Evolutionary Applications. 17: e13648. PMID 38293268 DOI: 10.1111/eva.13648  0.43
2023 Miller JT, Clark BW, Reid NM, Karchner SI, Roach JL, Hahn ME, Nacci D, Whitehead A. Independently evolved pollution resistance in four killifish populations is largely explained by few variants of large effect. Biorxiv : the Preprint Server For Biology. PMID 37066319 DOI: 10.1101/2023.04.07.536079  0.805
2023 Brennan RS, Whitehead A. Evidence of prezygotic isolation, but not assortative mating, between locally adapted populations of Fundulus heteroclitus across a salinity gradient. Journal of Evolutionary Biology. PMID 36852727 DOI: 10.1111/jeb.14159  0.77
2022 Griffiths JS, Sahasrabudhe RM, Marimuthu MPA, Nguyen OH, Beraut E, Escalona M, Whitehead A. A draft reference genome of the red abalone, Haliotis rufescens, for conservation genomics. The Journal of Heredity. PMID 36190478 DOI: 10.1093/jhered/esac047  0.38
2022 Velotta JP, McCormick SD, Whitehead A, Durso CS, Schultz ET. Repeated Genetic Targets of Natural Selection Underlying Adaptation of Fishes to Changing Salinity. Integrative and Comparative Biology. PMID 35661215 DOI: 10.1093/icb/icac072  0.351
2020 Swezey DS, Boles SE, Aquilino KM, Stott HK, Bush D, Whitehead A, Rogers-Bennett L, Hill TM, Sanford E. Evolved differences in energy metabolism and growth dictate the impacts of ocean acidification on abalone aquaculture. Proceedings of the National Academy of Sciences of the United States of America. PMID 33020305 DOI: 10.1073/pnas.2006910117  0.752
2020 Johnson LK, Sahasrabudhe R, Gill JA, Roach JL, Froenicke L, Brown CT, Whitehead A. Draft genome assemblies using sequencing reads from Oxford Nanopore Technology and Illumina platforms for four species of North American Fundulus killifish. Gigascience. 9. PMID 32556169 DOI: 10.1093/gigascience/giaa067  0.539
2020 Crawford DL, Schulte PM, Whitehead A, Oleksiak MF. Evolutionary Physiology and Genomics in the Highly Adaptable Killifish (Fundulus heteroclitus). Comprehensive Physiology. 10: 637-671. PMID 32163195 DOI: 10.1002/cphy.c190004  0.762
2019 Healy TM, Brennan RS, Whitehead A, Schulte PM. Mitochondria, sex and variation in routine metabolic rate. Molecular Ecology. PMID 31529542 DOI: 10.1111/mec.15244  0.78
2019 Miller JT, Reid NM, Nacci D, Whitehead A. Developing a High-Quality Linkage Map for the Atlantic Killifish . G3 (Bethesda, Md.). PMID 31289021 DOI: 10.1534/g3.119.400262  0.773
2019 McKenzie JL, Chung DJ, Healy TM, Brennan RS, Bryant HJ, Whitehead A, Schulte PM. Mitochondrial ecophysiology: assessing the evolutionary forces that shape mitochondrial variation. Integrative and Comparative Biology. PMID 31282925 DOI: 10.1093/icb/icz124  0.768
2019 Trego ML, Whitehead A, Kellar NM, Lauf M, Lewison RL. Tracking transcriptomic responses to endogenous and exogenous variation in cetaceans in the Southern California Bight. Conservation Physiology. 7: coz018. PMID 31110768 DOI: 10.1093/conphys/coz018  0.378
2019 Oziolor EM, Reid NM, Yair S, Lee KM, Guberman VerPloeg S, Bruns PC, Shaw JR, Whitehead A, Matson CW. Adaptive introgression enables evolutionary rescue from extreme environmental pollution. Science (New York, N.Y.). 364: 455-457. PMID 31048485 DOI: 10.1126/Science.Aav4155  0.789
2019 Masonbrink R, Purcell C, Boles S, Whitehead A, Hyde J, Seetharam A, Severin A. An Annotated Genome for Haliotis rufescens (Red Abalone) and Resequenced Green, Pink, Pinto, Black and White Abalone Species. Genome Biology and Evolution. PMID 30657886 DOI: 10.1093/Gbe/Evz006  0.756
2018 Brennan RS, Healy TM, Bryant HJ, La MV, Schulte PM, Whitehead A. Integrative population and physiological genomics reveals mechanisms of adaptation in killifish. Molecular Biology and Evolution. PMID 30102365 DOI: 10.1093/molbev/msy154  0.826
2018 Healy TM, Brennan RS, Whitehead A, Schulte PM. Tolerance traits related to climate change resilience are independent and polygenic. Global Change Biology. PMID 29995321 DOI: 10.1111/gcb.14386  0.78
2017 Rodgers R, Roach J, Reid N, Whitehead A, Duvernell DD. Phylogenomic analysis of Fundulidae (Teleostei: Cyprinodotiformes) using RNA-sequencing Data. Molecular Phylogenetics and Evolution. PMID 29289545 DOI: 10.1016/j.ympev.2017.12.030  0.731
2017 Whitehead A, Clark BW, Reid NM, Hahn ME, Nacci D. When evolution is the solution to pollution: Key principles, and lessons from rapid repeated adaptation of killifish (Fundulus heteroclitus) populations. Evolutionary Applications. 10: 762-783. PMID 29151869 DOI: 10.1111/eva.12470  0.805
2017 Holland EB, Goldstone JV, Pessah IN, Whitehead A, Reid NM, Karchner SI, Hahn ME, Nacci DE, Clark BW, Stegeman JJ. Ryanodine receptor and FK506 binding protein 1 in the Atlantic killifish (Fundulus heteroclitus): A phylogenetic and population-based comparison. Aquatic Toxicology (Amsterdam, Netherlands). 192: 105-115. PMID 28942070 DOI: 10.1016/J.Aquatox.2017.09.002  0.764
2017 Reid NM, Jackson CE, Gilbert D, Minx P, Montague MJ, Hampton TH, Helfrich LW, King BL, Nacci DE, Aluru N, Karchner SI, Colbourne JK, Hahn ME, Shaw JR, Oleksiak MF, ... ... Whitehead A, et al. The landscape of extreme genomic variation in the highly adaptable Atlantic killifish. Genome Biology and Evolution. PMID 28201664 DOI: 10.1093/gbe/evx023  0.797
2016 Reid NM, Proestou DA, Clark BW, Warren WC, Colbourne JK, Shaw JR, Karchner SI, Hahn ME, Nacci D, Oleksiak MF, Crawford DL, Whitehead A. The genomic landscape of rapid repeated evolutionary adaptation to toxic pollution in wild fish. Science (New York, N.Y.). 354: 1305-1308. PMID 27940876 DOI: 10.1126/science.aah4993  0.815
2016 Brennan RS, Hwang R, Tse M, Fangue NA, Whitehead A. Local adaptation to osmotic environment in killifish, Fundulus heteroclitus, is supported by divergence in swimming performance but not by differences in excess post-exercise oxygen consumption or aerobic scope. Comparative Biochemistry and Physiology. Part a, Molecular & Integrative Physiology. 196: 11-19. PMID 26880279 DOI: 10.1016/J.Cbpa.2016.02.006  0.774
2015 Reid NM, Whitehead A. Functional genomics to assess biological responses to marine pollution at physiological and evolutionary timescales: toward a vision of predictive ecotoxicology. Briefings in Functional Genomics. PMID 26700295 DOI: 10.1093/bfgp/elv060  0.753
2015 Brennan RS, Galvez F, Whitehead A. Reciprocal osmotic challenges reveal mechanisms of divergence in phenotypic plasticity in the killifish Fundulus heteroclitus. The Journal of Experimental Biology. 218: 1212-22. PMID 25722001 DOI: 10.1242/Jeb.110445  0.785
2014 Shaw JR, Hampton TH, King BL, Whitehead A, Galvez F, Gross RH, Keith N, Notch E, Jung D, Glaholt SP, Chen CY, Colbourne JK, Stanton BA. Natural selection canalizes expression variation of environmentally induced plasticity-enabling genes. Molecular Biology and Evolution. 31: 3002-15. PMID 25158801 DOI: 10.1093/Molbev/Msu241  0.342
2014 Whitehead A. Evolutionary genomics of environmental pollution. Advances in Experimental Medicine and Biology. 781: 321-37. PMID 24277307 DOI: 10.1007/978-94-007-7347-9_16  0.531
2014 Kozak GM, Brennan RS, Berdan EL, Fuller RC, Whitehead A. Functional and population genomic divergence within and between two species of killifish adapted to different osmotic niches. Evolution; International Journal of Organic Evolution. 68: 63-80. PMID 24134703 DOI: 10.1111/Evo.12265  0.811
2013 Whitehead A, Zhang S, Roach JL, Galvez F. Common functional targets of adaptive micro- and macro-evolutionary divergence in killifish. Molecular Ecology. 22: 3780-96. PMID 23841861 DOI: 10.1111/Mec.12316  0.399
2013 Dubansky B, Whitehead A, Miller JT, Rice CD, Galvez F. Multitissue molecular, genomic, and developmental effects of the Deepwater Horizon oil spill on resident Gulf killifish (Fundulus grandis). Environmental Science & Technology. 47: 5074-82. PMID 23659337 DOI: 10.1021/Es400458P  0.323
2012 Garcia TI, Shen Y, Crawford D, Oleksiak MF, Whitehead A, Walter RB. RNA-Seq reveals complex genetic response to Deepwater Horizon oil release in Fundulus grandis. Bmc Genomics. 13: 474. PMID 22971268 DOI: 10.1186/1471-2164-13-474  0.665
2012 Whitehead A, Roach JL, Zhang S, Galvez F. Salinity- and population-dependent genome regulatory response during osmotic acclimation in the killifish (Fundulus heteroclitus) gill. The Journal of Experimental Biology. 215: 1293-305. PMID 22442367 DOI: 10.1242/Jeb.062075  0.356
2012 Whitehead A. Comparative genomics in ecological physiology: toward a more nuanced understanding of acclimation and adaptation. The Journal of Experimental Biology. 215: 884-91. PMID 22357582 DOI: 10.1242/jeb.058735  0.377
2011 Flight PA, Nacci D, Champlin D, Whitehead A, Rand DM. The effects of mitochondrial genotype on hypoxic survival and gene expression in a hybrid population of the killifish, Fundulus heteroclitus. Molecular Ecology. 20: 4503-20. PMID 21980951 DOI: 10.1111/j.1365-294X.2011.05290.x  0.302
2011 Whitehead A, Roach JL, Zhang S, Galvez F. Genomic mechanisms of evolved physiological plasticity in killifish distributed along an environmental salinity gradient. Proceedings of the National Academy of Sciences of the United States of America. 108: 6193-8. PMID 21444822 DOI: 10.1073/Pnas.1017542108  0.441
2011 Whitehead A, Galvez F, Zhang S, Williams LM, Oleksiak MF. Functional genomics of physiological plasticity and local adaptation in killifish. The Journal of Heredity. 102: 499-511. PMID 20581107 DOI: 10.1093/Jhered/Esq077  0.5
2008 Cheviron ZA, Whitehead A, Brumfield RT. Transcriptomic variation and plasticity in rufous-collared sparrows (Zonotrichia capensis) along an altitudinal gradient. Molecular Ecology. 17: 4556-69. PMID 18986500 DOI: 10.1111/j.1365-294X.2008.03942.x  0.399
2008 Duvernell DD, Lindmeier JB, Faust KE, Whitehead A. Relative influences of historical and contemporary forces shaping the distribution of genetic variation in the Atlantic killifish, Fundulus heteroclitus. Molecular Ecology. 17: 1344-60. PMID 18302693 DOI: 10.1111/j.1365-294X.2007.03648.x  0.36
2007 Burnett KG, Bain LJ, Baldwin WS, Callard GV, Cohen S, Di Giulio RT, Evans DH, Gómez-Chiarri M, Hahn ME, Hoover CA, Karchner SI, Katoh F, Maclatchy DL, Marshall WS, Meyer JN, ... ... Whitehead A, et al. Fundulus as the premier teleost model in environmental biology: opportunities for new insights using genomics. Comparative Biochemistry and Physiology. Part D, Genomics & Proteomics. 2: 257-86. PMID 18071578 DOI: 10.1016/J.Cbd.2007.09.001  0.728
2006 Whitehead A, Crawford DL. Variation within and among species in gene expression: raw material for evolution. Molecular Ecology. 15: 1197-211. PMID 16626448 DOI: 10.1111/j.1365-294X.2006.02868.x  0.708
2006 Whitehead A, Crawford DL. Neutral and adaptive variation in gene expression. Proceedings of the National Academy of Sciences of the United States of America. 103: 5425-30. PMID 16567645 DOI: 10.1073/pnas.0507648103  0.726
2005 Whitehead A, Anderson SL, Ramirez A, Wilson BW. Cholinesterases in aquatic biomonitoring: assay optimization and species-specific characterization for a California native fish. Ecotoxicology (London, England). 14: 597-606. PMID 16215695 DOI: 10.1007/S10646-005-0010-Z  0.587
2005 Whitehead A, Crawford DL. Variation in tissue-specific gene expression among natural populations. Genome Biology. 6: R13. PMID 15693942 DOI: 10.1186/gb-2005-6-2-r13  0.692
2004 Whitehead A, Kuivila KM, Orlando JL, Kotelevtsev S, Anderson SL. Genotoxicity in native fish associated with agricultural runoff events. Environmental Toxicology and Chemistry / Setac. 23: 2868-77. PMID 15648762 DOI: 10.1897/03-649.1  0.493
2003 Whitehead A, Anderson SL, Kuivila KM, Roach JL, May B. Genetic variation among interconnected populations of Catostomus occidentalis: implications for distinguishing impacts of contaminants from biogeographical structuring. Molecular Ecology. 12: 2817-33. PMID 12969484 DOI: 10.1046/J.1365-294X.2003.01933.X  0.633
Low-probability matches (unlikely to be authored by this person)
2009 Whitehead A. Comparative mitochondrial genomics within and among species of killifish. Bmc Evolutionary Biology. 9: 11. PMID 19144111 DOI: 10.1186/1471-2148-9-11  0.263
2019 Rivkin LR, Santangelo JS, Alberti M, Aronson MFJ, de Keyzer CW, Diamond SE, Fortin MJ, Frazee LJ, Gorton AJ, Hendry AP, Liu Y, Losos JB, MacIvor JS, Martin RA, McDonnell MJ, ... ... Whitehead A, et al. A roadmap for urban evolutionary ecology. Evolutionary Applications. 12: 384-398. PMID 30828362 DOI: 10.1111/Eva.12734  0.26
2013 McCulloch ES, Tello JS, Whitehead A, Rolón-Mendoza CM, Maldonado-Rodríguez MC, Stevens RD. Fragmentation of Atlantic forest has not affected gene flow of a widespread seed-dispersing bat. Molecular Ecology. 22: 4619-33. PMID 23909879 DOI: 10.1111/mec.12418  0.256
2019 Trego ML, Hoh E, Whitehead A, Kellar NM, Lauf M, Datuin DO, Lewison RL. Contaminant exposure linked to cellular and endocrine biomarkers in southern California bottlenose dolphins. Environmental Science & Technology. PMID 30852886 DOI: 10.1021/Acs.Est.8B06487  0.246
2012 Miller HD, Clark BW, Hinton DE, Whitehead A, Martin S, Kwok KW, Kullman SW. Anchoring ethinylestradiol induced gene expression changes with testicular morphology and reproductive function in the medaka. Plos One. 7: e52479. PMID 23300682 DOI: 10.1371/Journal.Pone.0052479  0.226
2012 Whitehead A, Dubansky B, Bodinier C, Garcia TI, Miles S, Pilley C, Raghunathan V, Roach JL, Walker N, Walter RB, Rice CD, Galvez F. Genomic and physiological footprint of the Deepwater Horizon oil spill on resident marsh fishes. Proceedings of the National Academy of Sciences of the United States of America. 109: 20298-302. PMID 21949382 DOI: 10.1073/Pnas.1109545108  0.216
2023 Stevenson L, Muller E, Nacci D, Clark B, Whitehead A, Nisbet R. Connecting suborganismal data to bioenergetic processes: killifish embryos exposed to a dioxin-like compound. Environmental Toxicology and Chemistry. PMID 37232404 DOI: 10.1002/etc.5680  0.208
2020 Dong YW, Blanchard TS, Noll A, Vasquez P, Schmitz J, Kelly SP, Wright PA, Whitehead A. Genomic and physiological mechanisms underlying skin plasticity during water to air transition in an amphibious fish. The Journal of Experimental Biology. PMID 33328287 DOI: 10.1242/jeb.235515  0.204
2020 Dong YW, Blanchard TS, Noll A, Vasquez P, Schmitz J, Kelly SP, Wright PA, Whitehead A. Genomic and physiological mechanisms underlying skin plasticity during water to air transition in an amphibious fish. The Journal of Experimental Biology. PMID 34005743 DOI: 10.1242/jeb.235515  0.202
2012 Whitehead A, Pilcher W, Champlin D, Nacci D. Common mechanism underlies repeated evolution of extreme pollution tolerance. Proceedings. Biological Sciences / the Royal Society. 279: 427-33. PMID 21733895 DOI: 10.1098/rspb.2011.0847  0.198
2018 Blanchard TS, Whitehead A, Dong YW, Wright PA. Phenotypic flexibility in respiratory traits is associated with improved aerial respiration in an amphibious fish out of water. The Journal of Experimental Biology. PMID 30446543 DOI: 10.1242/jeb.186486  0.193
2014 Dubansky B, Whitehead A, Rice CD, Galvez F. Response to comment on "multi-tissue molecular, genomic, and developmental effects of the deepwater horizon oil spill on resident Gulf killifish (Fundulus grandis)". Environmental Science & Technology. 48: 7679-80. PMID 24946222 DOI: 10.1021/Es501185A  0.187
2018 Trego ML, Hoh E, Kellar NM, Meszaros S, Robbins MN, Dodder NG, Whitehead A, Lewison RL. Comprehensive screening links halogenated organic compounds with testosterone levels in male Delphinus delphis from the Southern California Bight. Environmental Science & Technology. PMID 29397698 DOI: 10.1021/Acs.Est.7B04652  0.175
2014 Pilcher W, Miles S, Tang S, Mayer G, Whitehead A. Genomic and genotoxic responses to controlled weathered-oil exposures confirm and extend field studies on impacts of the Deepwater Horizon oil spill on native killifish. Plos One. 9: e106351. PMID 25208076 DOI: 10.1371/Journal.Pone.0106351  0.166
2016 Cherr GN, Fairbairn E, Whitehead A. Impacts of Petroleum-Derived Pollutants on Fish Development. Annual Review of Animal Biosciences. PMID 27959669 DOI: 10.1146/Annurev-Animal-022516-022928  0.15
2010 Bailey KM, Romaine SP, Jackson BM, Farrin AJ, Efthymiou M, Barth JH, Copeland J, McCormack T, Whitehead A, Flather MD, Samani NJ, Nixon J, Hall AS, Balmforth AJ. Hepatic metabolism and transporter gene variants enhance response to rosuvastatin in patients with acute myocardial infarction: the GEOSTAT-1 Study. Circulation. Cardiovascular Genetics. 3: 276-85. PMID 20207952 DOI: 10.1161/CIRCGENETICS.109.898502  0.127
2016 López-Duarte PC, Fodrie FJ, Jensen OP, Whitehead A, Galvez F, Dubansky B, Able KW. Is Exposure to Macondo Oil Reflected in the Otolith Chemistry of Marsh-Resident Fish? Plos One. 11: e0162699. PMID 27682216 DOI: 10.1371/Journal.Pone.0162699  0.117
2010 Whitehead A. The evolutionary radiation of diverse osmotolerant physiologies in killifish (Fundulus sp.). Evolution; International Journal of Organic Evolution. 64: 2070-85. PMID 20100216 DOI: 10.1111/j.1558-5646.2010.00957.x  0.117
2009 Triant DA, Whitehead A. Simultaneous extraction of high-quality RNA and DNA from small tissue samples. The Journal of Heredity. 100: 246-50. PMID 18840898 DOI: 10.1093/Jhered/Esn083  0.096
2013 Whitehead A. Interactions between oil-spill pollutants and natural stressors can compound ecotoxicological effects. Integrative and Comparative Biology. 53: 635-47. PMID 23842611 DOI: 10.1093/icb/ict080  0.065
2010 Thompson SM, Whitehead A, Capon AG. The Healthy Built Environments Program: a joint initiative of the NSW Department of Health and the University of NSW. New South Wales Public Health Bulletin. 21: 134-8. PMID 20637170 DOI: 10.1071/NB10020  0.058
2010 Barth JH, Jackson BM, Farrin AJ, Efthymiou M, Worthy G, Copeland J, Bailey KM, Romaine SP, Balmforth AJ, McCormack T, Whitehead A, Flather MD, Nixon J, Hall AS. Change in serum lipids after acute coronary syndromes: secondary analysis of SPACE ROCKET study data and a comparative literature review. Clinical Chemistry. 56: 1592-8. PMID 20729301 DOI: 10.1373/clinchem.2010.145631  0.047
2009 Hall AS, Jackson BM, Farrin AJ, Efthymiou M, Barth JH, Copeland J, Bailey KM, Romaine SP, Balmforth AJ, McCormack T, Whitehead A, Flather MD, Nixon J. A randomized, controlled trial of simvastatin versus rosuvastatin in patients with acute myocardial infarction: the Secondary Prevention of Acute Coronary Events--Reduction of Cholesterol to Key European Targets Trial. European Journal of Cardiovascular Prevention and Rehabilitation : Official Journal of the European Society of Cardiology, Working Groups On Epidemiology & Prevention and Cardiac Rehabilitation and Exercise Physiology. 16: 712-21. PMID 19745745 DOI: 10.1097/HJR.0b013e3283316ce8  0.036
2020 Rivers PH, Langford N, Whitehead A, Harrison T. What influences prescribing decisions in a multimorbidity and polypharmacy context on the acute medical unit? An interprofessional, qualitative study. Journal of Evaluation in Clinical Practice. PMID 33314589 DOI: 10.1111/jep.13519  0.035
2017 Whitehead A, Gonzalez L. Two Cases of Platypnoea-Orthodexia. European Journal of Case Reports in Internal Medicine. 4: 000738. PMID 30755916 DOI: 10.12890/2017_000738  0.028
2014 Joyce N, Patel K, Whitehead A, Armstrong R, Virgincar N, Chatterjee A. A curious case of confusion. Jrsm Open. 5: 2054270414536551. PMID 25352988 DOI: 10.1177/2054270414536551  0.01
2009 Whitehead A. Healthcare workforce. Issue brief. Issue Brief (Health Policy Tracking Service). 1-24. PMID 19297707  0.01
2009 Whitehead A. Medical malpractice and tort reform. Issue brief. Issue Brief (Health Policy Tracking Service). 1-20. PMID 19297702  0.01
2009 Whitehead A. Medical errors and patient safety. Issue brief. Issue Brief (Health Policy Tracking Service). 1-21. PMID 19297700  0.01
2008 Berger JL, Whitehead A. Medical malpractice and tort reform. Issue Brief (Health Policy Tracking Service). 1-11. PMID 18345570  0.01
2008 Berger JL, Whitehead A. Medical errors and patient safety. Issue Brief (Health Policy Tracking Service). 1-17. PMID 18345569  0.01
2008 Berger JL, Whitehead A. Health care workforce. Issue Brief (Health Policy Tracking Service). 1-14. PMID 18345567  0.01
2004 Conway SP, Etherington C, Peckham DG, Brownlee KG, Whitehead A, Cunliffe H. Pharmacokinetics and safety of itraconazole in patients with cystic fibrosis. The Journal of Antimicrobial Chemotherapy. 53: 841-7. PMID 15044430 DOI: 10.1093/jac/dkh175  0.01
Hide low-probability matches.