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Lionel Christiaen - Publications

Affiliations: 
Center for Developmental Genetics New York University, New York, NY, United States 
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66 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2024 Hossain MF, Popsuj S, Vitrinel B, Kaplan NA, Stolfi A, Christiaen L, Ruggiu M. A conserved RNA switch for acetylcholine receptor clustering at neuromuscular junctions in chordates. Biorxiv : the Preprint Server For Biology. PMID 39005407 DOI: 10.1101/2024.07.05.602308  0.652
2024 Ohta N, Christiaen L. Cellular remodeling and JAK inhibition promote zygotic gene expression in the Ciona germline. Embo Reports. 25: 2188-2201. PMID 38649664 DOI: 10.1038/s44319-024-00139-0  0.342
2023 Vitrinel B, Vogel C, Christiaen L. Ring Finger 149-Related Is an FGF/MAPK-Independent Regulator of Pharyngeal Muscle Fate Specification. International Journal of Molecular Sciences. 24. PMID 37240211 DOI: 10.3390/ijms24108865  0.356
2022 Song M, Yuan X, Racioppi C, Leslie M, Stutt N, Aleksandrova A, Christiaen L, Wilson MD, Scott IC. GATA4/5/6 family transcription factors are conserved determinants of cardiac versus pharyngeal mesoderm fate. Science Advances. 8: eabg0834. PMID 35275720 DOI: 10.1126/sciadv.abg0834  0.337
2021 Nomaru H, Liu Y, De Bono C, Righelli D, Cirino A, Wang W, Song H, Racedo SE, Dantas AG, Zhang L, Cai CL, Angelini C, Christiaen L, Kelly RG, Baldini A, et al. Single cell multi-omic analysis identifies a Tbx1-dependent multilineage primed population in murine cardiopharyngeal mesoderm. Nature Communications. 12: 6645. PMID 34789765 DOI: 10.1038/s41467-021-26966-6  0.348
2020 Lowe EK, Racioppi C, Peyriéras N, Ristoratore F, Christiaen L, Swalla BJ, Stolfi A. A cis-regulatory change underlying the motor neuron-specific loss of Ebf expression in immotile tunicate larvae. Evolution & Development. e12364. PMID 33355999 DOI: 10.1111/ede.12364  0.748
2020 Shim WJ, Sinniah E, Xu J, Vitrinel B, Alexanian M, Andreoletti G, Shen S, Sun Y, Balderson B, Boix C, Peng G, Jing N, Wang Y, Kellis M, Tam PPL, ... ... Christiaen L, et al. Conserved Epigenetic Regulatory Logic Infers Genes Governing Cell Identity. Cell Systems. PMID 33278344 DOI: 10.1016/j.cels.2020.11.001  0.344
2020 Ohta N, Kaplan N, Ng JT, Gravez BJ, Christiaen L. Asymmetric Fitness of Second-Generation Interspecific Hybrids Between and . G3 (Bethesda, Md.). PMID 32518083 DOI: 10.1534/G3.120.401427  0.364
2019 Racioppi C, Wiechecki KA, Christiaen L. Combinatorial chromatin dynamics foster accurate cardiopharyngeal fate choices. Elife. 8. PMID 31746740 DOI: 10.7554/Elife.49921  0.468
2019 Prummel KD, Hess C, Nieuwenhuize S, Parker HJ, Rogers KW, Kozmikova I, Racioppi C, Brombacher EC, Czarkwiani A, Knapp D, Burger S, Chiavacci E, Shah G, Burger A, Huisken J, ... ... Christiaen L, et al. A conserved regulatory program initiates lateral plate mesoderm emergence across chordates. Nature Communications. 10: 3857. PMID 31451684 DOI: 10.1038/S41467-019-11561-7  0.618
2019 Wang W, Niu X, Stuart T, Jullian E, Mauck WM, Kelly RG, Satija R, Christiaen L. A single-cell transcriptional roadmap for cardiopharyngeal fate diversification. Nature Cell Biology. 21: 674-686. PMID 31160712 DOI: 10.1038/S41556-019-0336-Z  0.449
2019 Athanasiadou R, Neymotin B, Brandt N, Wang W, Christiaen L, Gresham D, Tranchina D. A complete statistical model for calibration of RNA-seq counts using external spike-ins and maximum likelihood theory. Plos Computational Biology. 15: e1006794. PMID 30856174 DOI: 10.1371/Journal.Pcbi.1006794  0.324
2019 Kaplan NA, Wang W, Christiaen L. Initial characterization of Wnt-Tcf functions during Ciona heart development. Developmental Biology. PMID 30635127 DOI: 10.1016/J.Ydbio.2018.12.018  0.418
2019 Bernadskaya YY, Brahmbhatt S, Gline SE, Wang W, Christiaen L. Discoidin-domain receptor coordinates cell-matrix adhesion and collective polarity in migratory cardiopharyngeal progenitors. Nature Communications. 10: 57. PMID 30610187 DOI: 10.1038/S41467-018-07976-3  0.351
2019 Racioppi C, Coppola U, Christiaen L, Ristoratore F. Transcriptional regulation of Rab32/38, a specific marker of pigment cell formation in Ciona robusta. Developmental Biology. 448: 111-118. PMID 30471267 DOI: 10.1016/J.Ydbio.2018.11.013  0.424
2018 Gandhi S, Razy-Krajka F, Christiaen L, Stolfi A. CRISPR Knockouts in Ciona Embryos. Advances in Experimental Medicine and Biology. 1029: 141-152. PMID 29542087 DOI: 10.1007/978-981-10-7545-2_13  0.782
2018 Wang W, Racioppi C, Gravez B, Christiaen L. Purification of Fluorescent Labeled Cells from Dissociated Ciona Embryos. Advances in Experimental Medicine and Biology. 1029: 101-107. PMID 29542083 DOI: 10.1007/978-981-10-7545-2_9  0.344
2018 Razy-Krajka F, Gravez B, Kaplan N, Racioppi C, Wang W, Christiaen L. An FGF-driven feed-forward circuit patterns the cardiopharyngeal mesoderm in space and time. Elife. 7. PMID 29431097 DOI: 10.7554/Elife.29656  0.462
2018 Copos C, Bernadskaya Y, Christiaen L, Mogilner A. Modeling Insights into the Mechanical Coordination in the Collective Locomotion of Heart Progenitor Cells Biophysical Journal. 114: 653a. DOI: 10.1016/J.Bpj.2017.11.3529  0.352
2017 Brozovic M, Dantec C, Dardaillon J, Dauga D, Faure E, Gineste M, Louis A, Naville M, Nitta KR, Piette J, Reeves W, Scornavacca C, Simion P, Vincentelli R, Bellec M, ... ... Christiaen L, et al. ANISEED 2017: extending the integrated ascidian database to the exploration and evolutionary comparison of genome-scale datasets. Nucleic Acids Research. PMID 29149270 DOI: 10.1093/Nar/Gkx1108  0.766
2017 Racioppi C, Valoroso MC, Coppola U, Lowe EK, Brown CT, Swalla BJ, Christiaen L, Stolfi A, Ristoratore F. Evolutionary loss of melanogenesis in the tunicate Molgula occulta. Evodevo. 8: 11. PMID 28729899 DOI: 10.1186/S13227-017-0074-X  0.745
2017 Gandhi S, Haeussler M, Razy-Krajka F, Christiaen L, Stolfi A. Evaluation and rational design of guide RNAs for efficient CRISPR/Cas9-mediated mutagenesis in Ciona. Developmental Biology. PMID 28341547 DOI: 10.1016/J.Ydbio.2017.03.003  0.776
2016 Lam KY, Westrick ZM, Müller CL, Christiaen L, Bonneau R. Fused Regression for Multi-source Gene Regulatory Network Inference. Plos Computational Biology. 12: e1005157. PMID 27923054 DOI: 10.1371/Journal.Pcbi.1005157  0.332
2016 Tolkin T, Christiaen L. Rewiring of an ancestral Tbx1/10-Ebf-Mrf network for pharyngeal muscle specification in distinct embryonic lineages. Development. 143: 3852-3862. PMID 27802138 DOI: 10.1242/Dev.136267  0.367
2016 Anderson HE, Christiaen L. Ciona as a Simple Chordate Model for Heart Development and Regeneration. Journal of Cardiovascular Development and Disease. 3. PMID 27642586 DOI: 10.3390/Jcdd3030025  0.352
2016 Bernadskaya Y, Christiaen L. Transcriptional Control of Developmental Cell Behaviors. Annual Review of Cell and Developmental Biology. 32: 77-101. PMID 27501446 DOI: 10.1146/Annurev-Cellbio-111315-125218  0.4
2015 Stolfi A, Ryan K, Meinertzhagen IA, Christiaen L. Migratory neuronal progenitors arise from the neural plate borders in tunicates. Nature. PMID 26524532 DOI: 10.1038/Nature15758  0.666
2015 Diogo R, Kelly RG, Christiaen L, Levine M, Ziermann JM, Molnar JL, Noden DM, Tzahor E. A new heart for a new head in vertebrate cardiopharyngeal evolution. Nature. 520: 466-73. PMID 25903628 DOI: 10.1038/Nature14435  0.499
2015 Kaplan N, Razy-Krajka F, Christiaen L. Regulation and evolution of cardiopharyngeal cell identity and behavior: insights from simple chordates. Current Opinion in Genetics & Development. 32: 119-128. PMID 25819888 DOI: 10.1016/J.Gde.2015.02.008  0.509
2015 Gline S, Kaplan N, Bernadskaya Y, Abdu Y, Christiaen L. Surrounding tissues canalize motile cardiopharyngeal progenitors towards collective polarity and directed migration. Development (Cambridge, England). 142: 544-54. PMID 25564651 DOI: 10.1242/Dev.115444  0.313
2015 Stolfi A, Sasakura Y, Chalopin D, Satou Y, Christiaen L, Dantec C, Endo T, Naville M, Nishida H, Swalla BJ, Volff JN, Voskoboynik A, Dauga D, Lemaire P. Guidelines for the nomenclature of genetic elements in tunicate genomes. Genesis (New York, N.Y. : 2000). 53: 1-14. PMID 25220678 DOI: 10.1002/Dvg.22822  0.743
2014 Stolfi A, Gandhi S, Salek F, Christiaen L. Tissue-specific genome editing in Ciona embryos by CRISPR/Cas9. Development (Cambridge, England). 141: 4115-20. PMID 25336740 DOI: 10.1242/Dev.114488  0.788
2014 Stolfi A, Lowe EK, Racioppi C, Ristoratore F, Brown CT, Swalla BJ, Christiaen L. Divergent mechanisms regulate conserved cardiopharyngeal development and gene expression in distantly related ascidians. Elife. 3: e03728. PMID 25209999 DOI: 10.7554/Elife.03728  0.786
2014 Racioppi C, Kamal AK, Razy-Krajka F, Gambardella G, Zanetti L, di Bernardo D, Sanges R, Christiaen LA, Ristoratore F. Fibroblast growth factor signalling controls nervous system patterning and pigment cell formation in Ciona intestinalis. Nature Communications. 5: 4830. PMID 25189217 DOI: 10.1038/ncomms5830  0.302
2014 Razy-Krajka F, Lam K, Wang W, Stolfi A, Joly M, Bonneau R, Christiaen L. Collier/OLF/EBF-dependent transcriptional dynamics control pharyngeal muscle specification from primed cardiopharyngeal progenitors Developmental Cell. 29: 263-276. PMID 24794633 DOI: 10.1016/J.Devcel.2014.04.001  0.687
2014 Stolfi A, Lowe EK, Racioppi C, Ristoratore F, Brown CT, Swalla BJ, Christiaen L. Author response: Divergent mechanisms regulate conserved cardiopharyngeal development and gene expression in distantly related ascidians Elife. DOI: 10.7554/Elife.03728.032  0.759
2013 Wang W, Razy-Krajka F, Siu E, Ketcham A, Christiaen L. NK4 Antagonizes Tbx1/10 to Promote Cardiac versus Pharyngeal Muscle Fate in the Ascidian Second Heart Field Plos Biology. 11. PMID 24311985 DOI: 10.1371/Journal.Pbio.1001725  0.394
2013 Christiaen L. Cis-regulatory timers for developmental gene expression. Plos Biology. 11. PMID 24204213 DOI: 10.1371/Journal.Pbio.1001698  0.422
2013 Haupaix N, Stolfi A, Sirour C, Picco V, Levine M, Christiaen L, Yasuo H. p120RasGAP mediates ephrin/Eph-dependent attenuation of FGF/ERK signals during cell fate specification in ascidian embryos. Development (Cambridge, England). 140: 4347-52. PMID 24067356 DOI: 10.1242/Dev.098756  0.704
2012 Stolfi A, Christiaen L. Genetic and genomic toolbox of the chordate Ciona intestinalis. Genetics. 192: 55-66. PMID 22964837 DOI: 10.1534/Genetics.112.140590  0.677
2012 Tolkin T, Christiaen L. Development and evolution of the ascidian cardiogenic mesoderm. Current Topics in Developmental Biology. 100: 107-142. PMID 22449842 DOI: 10.1016/B978-0-12-387786-4.00011-7  0.403
2012 Wang W, Christiaen L. Transcriptional enhancers in ascidian development. Current Topics in Developmental Biology. 98: 147-172. PMID 22305162 DOI: 10.1016/B978-0-12-386499-4.00006-9  0.436
2010 Stolfi A, Gainous TB, Young JJ, Mori A, Levine M, Christiaen L. Early chordate origins of the vertebrate second heart field. Science (New York, N.Y.). 329: 565-8. PMID 20671188 DOI: 10.1126/Science.1190181  0.724
2010 Tassy O, Dauga D, Daian F, Sobral D, Robin F, Khoueiry P, Salgado D, Fox V, Caillol D, Schiappa R, Laporte B, Rios A, Luxardi G, Kusakabe T, Joly JS, ... ... Christiaen L, et al. The ANISEED database: digital representation, formalization, and elucidation of a chordate developmental program. Genome Research. 20: 1459-68. PMID 20647237 DOI: 10.1101/Gr.108175.110  0.406
2010 Haeussler M, Jaszczyszyn Y, Christiaen L, Joly JS. A cis-regulatory signature for chordate anterior neuroectodermal genes. Plos Genetics. 6: e1000912. PMID 20419150 DOI: 10.1371/Journal.Pgen.1000912  0.445
2010 Christiaen L, Stolfi A, Levine M. BMP signaling coordinates gene expression and cell migration during precardiac mesoderm development Developmental Biology. 340: 179-187. PMID 19913008 DOI: 10.1016/J.Ydbio.2009.11.006  0.749
2009 Christiaen L, Wagner E, Shi W, Levine M. Isolation of individual cells and tissues from electroporated sea squirt (Ciona) embryos by fluorescence-activated cell sorting (FACS). Cold Spring Harbor Protocols. 2009: pdb.prot5349. PMID 20150096 DOI: 10.1101/Pdb.Prot5349  0.465
2009 Christiaen L, Wagner E, Shi W, Levine M. Whole-mount in situ hybridization on sea squirt (Ciona intestinalis) embryos. Cold Spring Harbor Protocols. 2009: pdb.prot5348. PMID 20150095 DOI: 10.1101/Pdb.Prot5348  0.447
2009 Christiaen L, Wagner E, Shi W, Levine M. Microinjection of morpholino oligos and RNAs in sea squirt (Ciona) embryos. Cold Spring Harbor Protocols. 2009: pdb.prot5347. PMID 20150094 DOI: 10.1101/Pdb.Prot5347  0.432
2009 Christiaen L, Wagner E, Shi W, Levine M. X-gal staining of electroporated sea squirt (Ciona) embryos. Cold Spring Harbor Protocols. 2009: pdb.prot5346. PMID 20150093 DOI: 10.1101/Pdb.Prot5346  0.425
2009 Christiaen L, Wagner E, Shi W, Levine M. Electroporation of transgenic DNAs in the sea squirt Ciona. Cold Spring Harbor Protocols. 2009: pdb.prot5345. PMID 20150092 DOI: 10.1101/Pdb.Prot5345  0.387
2009 Christiaen L, Wagner E, Shi W, Levine M. Isolation of sea squirt (Ciona) gametes, fertilization, dechorionation, and development. Cold Spring Harbor Protocols. 2009: pdb.prot5344. PMID 20150091 DOI: 10.1101/Pdb.Prot5344  0.415
2009 Christiaen L, Wagner E, Shi W, Levine M. The sea squirt Ciona intestinalis. Cold Spring Harbor Protocols. 2009: pdb.emo138. PMID 20150076 DOI: 10.1101/Pdb.Emo138  0.387
2009 Christiaen L, Stolfi A, Davidson B, Levine M. Spatio-temporal intersection of Lhx3 and Tbx6 defines the cardiac field through synergistic activation of Mesp. Developmental Biology. 328: 552-60. PMID 19389354 DOI: 10.1016/J.Ydbio.2009.01.033  0.783
2008 Christiaen L, Davidson B, Kawashima T, Powell W, Nolla H, Vranizan K, Levine M. The transcription/migration interface in heart precursors of Ciona intestinalis. Science (New York, N.Y.). 320: 1349-52. PMID 18535245 DOI: 10.1126/Science.1158170  0.744
2007 Beh J, Shi W, Levine M, Davidson B, Christiaen L. FoxF is essential for FGF-induced migration of heart progenitor cells in the ascidian Ciona intestinalis. Development (Cambridge, England). 134: 3297-305. PMID 17720694 DOI: 10.1242/Dev.010140  0.72
2007 Christiaen L, Jaszczyszyn Y, Kerfant M, Kano S, Thermes V, Joly JS. Evolutionary modification of mouth position in deuterostomes. Seminars in Cell & Developmental Biology. 18: 502-511. PMID 17656139 DOI: 10.1016/J.Semcdb.2007.06.002  0.375
2006 Davidson B, Shi W, Beh J, Christiaen L, Levine M. FGF signaling delineates the cardiac progenitor field in the simple chordate, Ciona intestinalis. Genes & Development. 20: 2728-38. PMID 17015434 DOI: 10.1101/Gad.1467706  0.754
2006 Davidson B, Christiaen L. Linking chordate gene networks to cellular behavior in ascidians. Cell. 124: 247-50. PMID 16439196 DOI: 10.1016/J.Cell.2006.01.013  0.692
2006 Davidson B, Shi W, Beh J, Christiaen L, Levine M. Two hearts beat as one: Experimental compartmentalization of the Ciona heart Developmental Biology. 295: 3-4. DOI: 10.1016/J.Ydbio.2006.04.040  0.678
2005 Moret F, Christiaen L, Deyts C, Blin M, Joly JS, Vernier P. The dopamine-synthesizing cells in the swimming larva of the tunicate Ciona intestinalis are located only in the hypothalamus-related domain of the sensory vesicle. The European Journal of Neuroscience. 21: 3043-55. PMID 15978015 DOI: 10.1111/J.1460-9568.2005.04147.X  0.33
2005 Moret F, Christiaen L, Deyts C, Blin M, Vernier P, Joly JS. Regulatory gene expressions in the ascidian ventral sensory vesicle: evolutionary relationships with the vertebrate hypothalamus. Developmental Biology. 277: 567-79. PMID 15617694 DOI: 10.1016/J.Ydbio.2004.11.004  0.401
2005 Christiaen L, Bourrat F, Joly JS. A modular cis-regulatory system controls isoform-specific pitx expression in ascidian stomodaeum. Developmental Biology. 277: 557-566. PMID 15617693 DOI: 10.1016/J.Ydbio.2004.10.008  0.426
2005 Tiozzo S, Christiaen L, Deyts C, Manni L, Joly JS, Burighel P. Embryonic versus blastogenetic development in the compound ascidian Botryllus schlosseri: insights from Pitx expression patterns. Developmental Dynamics : An Official Publication of the American Association of Anatomists. 232: 468-78. PMID 15614778 DOI: 10.1002/Dvdy.20250  0.469
2004 Hendrickson C, Christiaen L, Deschet K, Jiang D, Joly JS, Legendre L, Nakatani Y, Tresser J, Smith WC. Culture of Adult Ascidians and Ascidian Genetics Methods in Cell Biology. 74: 143-170. PMID 15575606 DOI: 10.1016/S0091-679X(04)74007-8  0.353
2002 Christiaen L, Burighel P, Smith WC, Vernier P, Bourrat F, Joly JS. Pitx genes in Tunicates provide new molecular insight into the evolutionary origin of pituitary. Gene. 287: 107-13. PMID 11992728 DOI: 10.1016/S0378-1119(01)00865-4  0.412
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