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Sarbottam Piya - Publications

Affiliations: 
2011-2013 Biology and Microbiology South Dakota State University, Brookings, SD, United States 
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16/35 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Hawk TE, Piya S, Zadegan SB, Li P, Rice JH, Hewezi T. The soybean immune receptor GmBIR1 regulates host transcriptome, spliceome, and immunity during cyst nematode infection. The New Phytologist. PMID 37337845 DOI: 10.1111/nph.19087  0.319
2023 Piya S, Pantalone V, Zadegan SB, Shipp S, Lakhssassi N, Knizia D, Krishnan HB, Meksem K, Hewezi T. Soybean gene co-expression network analysis identifies two co-regulated gene modules associated with nodule formation and development. Molecular Plant Pathology. PMID 36975024 DOI: 10.1111/mpp.13327  0.391
2021 Piya S, Hawk T, Patel B, Baldwin L, Rice JH, Stewart CN, Hewezi T. Kinase-dead mutation: A novel strategy for improving soybean resistance to soybean cyst nematode Heterodera glycines. Molecular Plant Pathology. PMID 34851539 DOI: 10.1111/mpp.13168  0.473
2021 Usovsky M, Lakhssassi N, Patil GB, Vuong TD, Piya S, Hewezi T, Robbins RT, Stupar RM, Meksem K, Nguyen HT. Dissecting nematode resistance regions in soybean revealed pleiotropic effect of soybean cyst and reniform nematode resistance genes. The Plant Genome. e20083. PMID 33724721 DOI: 10.1002/tpg2.20083  0.311
2021 Usovsky M, Lakhssassi N, Patil GB, Vuong TD, Piya S, Hewezi T, Robbins RT, Stupar RM, Meksem K, Nguyen HT. Dissecting nematode resistance regions in soybean revealed pleiotropic effect of soybean cyst and reniform nematode resistance genes. The Plant Genome. e20083. PMID 33724721 DOI: 10.1002/tpg2.20083  0.311
2020 Niyikiza D, Piya S, Routray P, Miao L, Kim WS, Burch-Smith T, Gill T, Sams C, Arelli PR, Pantalone V, Krishnan HB, Hewezi T. Interactions of gene expression, alternative splicing, and DNA methylation in determining nodule identity. The Plant Journal : For Cell and Molecular Biology. PMID 32491251 DOI: 10.1111/tpj.14861  0.346
2020 Piya S, Liu J, Burch-Smith T, Baum TJ, Hewezi T. A role for Arabidopsis growth-regulating factors 1 and 3 in growth-stress antagonism. Journal of Experimental Botany. 71: 1402-1417. PMID 31701146 DOI: 10.1093/jxb/erz502  0.387
2019 Lakhssassi N, Patil G, Piya S, Zhou Z, Baharlouei A, Kassem MA, Lightfoot DA, Hewezi T, Barakat A, Nguyen HT, Meksem K. Genome reorganization of the GmSHMT gene family in soybean showed a lack of functional redundancy in resistance to soybean cyst nematode. Scientific Reports. 9: 1506. PMID 30728404 DOI: 10.1038/s41598-018-37815-w  0.375
2017 Bakshi A, Piya S, Fernandez JC, Chervin C, Hewezi T, Binder B. Ethylene receptors signal via a non-canonical pathway to regulate abscisic acid responses. Plant Physiology. PMID 29158332 DOI: 10.1104/Pp.17.01321  0.365
2017 Piya S, Bennett M, Rambani A, Hewezi T. Transcriptional Activity of Transposable Elements May Contribute to Gene Expression Changes in the Syncytium Formed by Cyst Nematode in Arabidopsis Roots. Plant Signaling & Behavior. 0. PMID 28805485 DOI: 10.1080/15592324.2017.1362521  0.408
2017 Hewezi T, Lane T, Piya S, Rambani A, Rice JH, Staton M. Cyst nematode parasitism induces dynamic changes in the root epigenome. Plant Physiology. PMID 28298479 DOI: 10.1104/pp.16.01948  0.401
2014 Piya S, Shrestha SK, Binder B, Stewart CN, Hewezi T. Protein-protein interaction and gene co-expression maps of ARFs and Aux/IAAs in Arabidopsis. Frontiers in Plant Science. 5: 744. PMID 25566309 DOI: 10.3389/Fpls.2014.00744  0.328
2014 Piya S, Nepal MP, Butler JL, Larson GE, Neupane A. Genetic diversity and population structure of sickleweed (Falcaria vulgaris; Apiaceae) in the upper Midwest USA Biological Invasions. 16: 2115-2125. DOI: 10.1007/S10530-014-0651-Z  0.637
2013 Neupane A, Nepal MP, Benson BV, Macarthur KJ, Piya S. Evolutionary history of mitogen-activated protein kinase (MAPK) genes in Lotus, Medicago, and Phaseolus. Plant Signaling & Behavior. 8: e27189. PMID 24317362 DOI: 10.4161/Psb.27189  0.569
2013 Neupane A, Nepal MP, Piya S, Subramanian S, Rohila JS, Reese RN, Benson BV. Identification, nomenclature, and evolutionary relationships of mitogen-activated protein kinase (MAPK) genes in soybean. Evolutionary Bioinformatics Online. 9: 363-86. PMID 24137047 DOI: 10.4137/Ebo.S12526  0.57
2013 Piya S, Nepal MP. Characterization of Nuclear and Chloroplast Microsatellite Markers for <i>Falcaria vulgaris</i> (Apiaceae) American Journal of Plant Sciences. 4: 590-595. DOI: 10.4236/Ajps.2013.43077  0.653
Low-probability matches (unlikely to be authored by this person)
2023 Mazarei M, Routray P, Piya S, Stewart CN, Hewezi T. Overexpression of soybean and enhances root growth and water-deficit stress tolerance in soybean. Frontiers in Plant Science. 14: 1186292. PMID 37324708 DOI: 10.3389/fpls.2023.1186292  0.297
2015 Hewezi T, Juvale PS, Piya S, Maier TR, Rambani A, Rice JH, Mitchum MG, Davis EL, Hussey RS, Baum TJ. The cyst nematode effector protein 10A07 targets and recruits host posttranslational machinery to mediate its nuclear trafficking and to promote parasitism in Arabidopsis. The Plant Cell. 27: 891-907. PMID 25715285 DOI: 10.1105/Tpc.114.135327  0.279
2018 Piya S, Binder BM, Hewezi T. Canonical and noncanonical ethylene signaling pathways that regulate Arabidopsis susceptibility to the cyst nematode Heterodera schachtii. The New Phytologist. PMID 30136723 DOI: 10.1111/Nph.15400  0.27
2020 Lakhssassi N, Zhou Z, Liu S, Piya S, Cullen MA, El Baze A, Knizia D, Patil GB, Badad O, Embaby MG, Meksem J, Lakhssassi A, AbuGhazaleh A, Hewezi T, Meksem K. Soybean TILLING-by-Sequencing + reveals the role of novel GmSACPD members in the unsaturated fatty acid biosynthesis while maintaining healthy nodules. Journal of Experimental Botany. PMID 32898219 DOI: 10.1093/jxb/eraa402  0.267
2020 Lakhssassi N, Zhou Z, Liu S, Piya S, Cullen MA, El Baze A, Knizia D, Patil GB, Badad O, Embaby MG, Meksem J, Lakhssassi A, AbuGhazaleh A, Hewezi T, Meksem K. Soybean TILLING-by-Sequencing + reveals the role of novel GmSACPD members in the unsaturated fatty acid biosynthesis while maintaining healthy nodules. Journal of Experimental Botany. PMID 32898219 DOI: 10.1093/jxb/eraa402  0.267
2017 Piya S, Kihm C, Rice JH, Baum TJ, Hewezi T. Cooperative regulatory functions of miR858 and MYB83 during cyst nematode parasitism. Plant Physiology. PMID 28512179 DOI: 10.1104/pp.17.00273  0.257
2019 Patil GB, Lakhssassi N, Wan J, Song L, Zhou Z, Klepadlo M, Vuong TD, Stec AO, Kahil SS, Colantonio V, Valliyodan B, Rice HJ, Piya S, Hewezi T, Stupar RM, et al. Whole genome re-sequencing reveals the impact of the interaction of copy number variants of the rhg-1 and Rhg4 genes on broad-based resistance to soybean cyst nematode. Plant Biotechnology Journal. PMID 30688400 DOI: 10.1111/pbi.13086  0.248
2016 Hewezi T, Piya S, Qi M, Balasubramaniam M, Rice JH, Baum TJ. Arabidopsis miR827 mediates post-transcriptional gene silencing of its ubiquitin E3 ligase target gene in the syncytium of the cyst nematode Heterodera schachtii to enhance susceptibility. The Plant Journal : For Cell and Molecular Biology. PMID 27304416 DOI: 10.1111/tpj.13238  0.245
2020 Lakhssassi N, Piya S, Bekal S, Liu S, Zhou Z, Bergounioux C, Miao L, Meksem J, Lakhssassi A, Jones K, Kassem MA, Benhamed M, Bendahmane A, Lambert K, Boualem A, et al. A pathogenesis related protein GmPR08-Bet VI promotes a molecular interaction between the GmSHMT08 and GmSNAP18 in resistance to Heterodera glycines. Plant Biotechnology Journal. PMID 31960590 DOI: 10.1111/Pbi.13343  0.23
2014 Hewezi T, Piya S, Richard G, Rice JH. Spatial and temporal expression patterns of auxin response transcription factors in the syncytium induced by the beet cyst nematode Heterodera schachtii in Arabidopsis. Molecular Plant Pathology. 15: 730-6. PMID 24433277 DOI: 10.1111/mpp.12121  0.228
2023 Li K, Sun YH, Ouyang Z, Negi S, Gao Z, Zhu J, Wang W, Chen Y, Piya S, Hu W, Zavodszky MI, Yalamanchili H, Cao S, Gehrke A, Sheehan M, et al. scRNASequest: an ecosystem of scRNA-seq analysis, visualization, and publishing. Bmc Genomics. 24: 228. PMID 37131143 DOI: 10.1186/s12864-023-09332-2  0.223
2022 Bennett M, Piya S, Baum TJ, Hewezi T. miR778 mediates gene expression, histone modification, and DNA methylation during cyst nematode parasitism. Plant Physiology. PMID 35579365 DOI: 10.1093/plphys/kiac228  0.217
2020 Lakhssassi N, Piya S, Knizia D, El Baze A, Cullen MA, Meksem J, Lakhssassi A, Hewezi T, Meksem K. Mutations at the Serine Hydroxymethyltransferase Impact its Interaction with a Soluble NSF Attachment Protein and a Pathogenesis-Related Protein in Soybean. Vaccines. 8. PMID 32629961 DOI: 10.3390/vaccines8030349  0.18
2021 Piya S, Lopes-Caitar VS, Kim WS, Pantalone V, Krishnan HB, Hewezi T. Title: Hypermethylation of miRNA Genes During Nodule Development. Frontiers in Molecular Biosciences. 8: 616623. PMID 33928115 DOI: 10.3389/fmolb.2021.616623  0.176
2020 Rambani A, Hu Y, Piya S, Long M, Rice JH, Pantalone V, Hewezi T. Identification of differentially methylated miRNA genes during compatible and incompatible interactions between soybean and soybean cyst nematode. Molecular Plant-Microbe Interactions : Mpmi. PMID 32757880 DOI: 10.1094/MPMI-07-20-0196-R  0.17
2020 Rambani A, Hu Y, Piya S, Long M, Rice JH, Pantalone V, Hewezi T. Identification of differentially methylated miRNA genes during compatible and incompatible interactions between soybean and soybean cyst nematode. Molecular Plant-Microbe Interactions : Mpmi. PMID 32757880 DOI: 10.1094/MPMI-07-20-0196-R  0.17
2023 Zhu J, Sun YH, Ouyang Z, Li K, Negi S, Piya S, Hu W, Zavodszky MI, Yalamanchili H, Chen Y, Zhang X, Casey F, Zhang B. RNASequest: An end-to-end reproducible RNAseq data analysis and publishing framework. Journal of Molecular Biology. 168017. PMID 36806691 DOI: 10.1016/j.jmb.2023.168017  0.165
2020 Lakhssassi N, Piya S, Knizia D, El Baze A, Cullen MA, Meksem J, Lakhssassi A, Hewezi T, Meksem K. Mutations at the Serine Hydroxymethyltransferase Impact its Interaction with a Soluble NSF Attachment Protein and a Pathogenesis-Related Protein in Soybean. Vaccines. 8. PMID 32629961 DOI: 10.3390/vaccines8030349  0.134
2020 Shrestha U, Dee ME, Piya S, Ownley BH, Butler DM. Soil inoculation with Trichoderma asperellum, T. harzianum or Streptomyces griseoviridis prior to anaerobic soil disinfestation (ASD) does not increase ASD efficacy against Sclerotium rolfsii germination Applied Soil Ecology. 147: 103383. DOI: 10.1016/j.apsoil.2019.103383  0.019
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