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Wenbo Li - Publications

Affiliations: 
University of Texas at Houston Medical School, Houston, TX, United States 
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34 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Zheng C, Wei Y, Zhang P, Lin K, He D, Teng H, Manyam G, Zhang Z, Liu W, Lee HRL, Tang X, He W, Islam N, Jain A, Chiu Y, ... ... Li W, et al. CRISPR-Cas9-based functional interrogation of unconventional translatome reveals human cancer dependency on cryptic non-canonical open reading frames. Nature Structural & Molecular Biology. PMID 37932451 DOI: 10.1038/s41594-023-01117-1  0.308
2023 Pulecio J, Tayyebi Z, Liu D, Wong W, Luo R, Damodaran JR, Kaplan S, Cho H, Yan J, Murphy D, Rickert RW, Shukla A, Zhong A, González F, Yang D, ... Li W, et al. Discovery of Competent Chromatin Regions in Human Embryonic Stem Cells. Biorxiv : the Preprint Server For Biology. PMID 37398096 DOI: 10.1101/2023.06.14.544990  0.357
2022 Zhu X, Qi C, Wang R, Lee JH, Shao J, Bei L, Xiong F, Nguyen PT, Li G, Krakowiak J, Koh SP, Simon LM, Han L, Moore TI, Li W. Acute depletion of human core nucleoporin reveals direct roles in transcription control but dispensability for 3D genome organization. Cell Reports. 41: 111576. PMID 36323253 DOI: 10.1016/j.celrep.2022.111576  0.404
2021 Lee JH, Wang R, Xiong F, Krakowiak J, Liao Z, Nguyen PT, Moroz-Omori EV, Shao J, Zhu X, Bolt MJ, Wu H, Singh PK, Bi M, Shi CJ, Jamal N, ... ... Li W, et al. Enhancer RNA m6A methylation facilitates transcriptional condensate formation and gene activation. Molecular Cell. PMID 34375583 DOI: 10.1016/j.molcel.2021.07.024  0.344
2021 Oh S, Shao J, Mitra J, Xiong F, D'Antonio M, Wang R, Garcia-Bassets I, Ma Q, Zhu X, Lee JH, Nair SJ, Yang F, Ohgi K, Frazer KA, Zhang ZD, ... Li W, et al. Enhancer release and retargeting activates disease-susceptibility genes. Nature. PMID 34040254 DOI: 10.1038/s41586-021-03577-1  0.746
2020 González-Rodríguez P, Cheray M, Füllgrabe J, Salli M, Engskog-Vlachos P, Keane L, Cunha V, Lupa A, Li W, Ma Q, Dreij K, Rosenfeld MG, Joseph B. The DNA methyltransferase DNMT3A contributes to autophagy long-term memory. Autophagy. PMID 32876528 DOI: 10.1080/15548627.2020.1816664  0.438
2020 Yang M, Lee JH, Zhang Z, De La Rosa R, Bi M, Tan Y, Liao Y, Hong J, Du B, Wu Y, Scheirer J, Hong T, Li W, Fei T, Hsieh CL, ... ... Li W, et al. Enhancer RNAs Mediate Estrogen-Induced Decommissioning of Selective Enhancers by Recruiting ERα and Its Cofactor. Cell Reports. 31: 107803. PMID 32579929 DOI: 10.1016/j.celrep.2020.107803  0.62
2020 Liao Z, Lee JH, Krakowiak J, Wang R, Li W. Enforced Activation of Enhancer RNAs In Situ through the dCas9 Synergistic Activation Mediator System. Journal of Visualized Experiments : Jove. PMID 32568241 DOI: 10.3791/61460  0.431
2020 Luo Z, Wang X, Jiang H, Wang R, Chen J, Chen Y, Xu Q, Cao J, Gong X, Wu J, Yang Y, Li W, Han C, Cheng CY, Rosenfeld MG, et al. Reorganized 3D Genome Structures Support Transcriptional Regulation in Mouse Spermatogenesis. Iscience. 23: 101034. PMID 32315832 DOI: 10.1016/J.Isci.2020.101034  0.608
2020 Lee JH, Xiong F, Li W. Enhancer RNAs in Cancer: Regulation, Mechanisms and Therapeutic Potential. Rna Biology. PMID 31916476 DOI: 10.1080/15476286.2020.1712895  0.372
2019 Nguyen TM, Kabotyanski EB, Reineke LC, Shao J, Xiong F, Lee JH, Dubrulle J, Johnson H, Stossi F, Tsoi PS, Choi KJ, Ellis AG, Zhao N, Cao J, Adewunmi O, ... ... Li W, et al. The SINEB1 element in the long non-coding RNA Malat1 is necessary for TDP-43 proteostasis. Nucleic Acids Research. PMID 31863590 DOI: 10.1093/Nar/Gkz1176  0.315
2019 Zhang Z, Lee JH, Ruan H, Ye Y, Krakowiak J, Hu Q, Xiang Y, Gong J, Zhou B, Wang L, Lin C, Diao L, Mills GB, Li W, Han L. Transcriptional landscape and clinical utility of enhancer RNAs for eRNA-targeted therapy in cancer. Nature Communications. 10: 4562. PMID 31594934 DOI: 10.1038/s41467-019-12543-5  0.307
2018 Bai S, Fu K, Yin H, Cui Y, Yue Q, Li W, Cheng L, Tan H, Liu X, Guo Y, Zhang Y, Xie J, He W, Wang Y, Feng H, et al. Sox30 initiates transcription of haploid genes during late meiosis and spermiogenesis in mouse testes. Development (Cambridge, England). PMID 29866902 DOI: 10.1242/dev.164855  0.335
2018 Cardamone MD, Tanasa B, Cederquist CT, Huang J, Mahdaviani K, Li W, Rosenfeld MG, Liesa M, Perissi V. Mitochondrial Retrograde Signaling in Mammals Is Mediated by the Transcriptional Cofactor GPS2 via Direct Mitochondria-to-Nucleus Translocation. Molecular Cell. 69: 757-772.e7. PMID 29499132 DOI: 10.1016/J.Molcel.2018.01.037  0.714
2017 Gao X, Lee HY, Li W, Platt RJ, Barrasa MI, Ma Q, Elmes RR, Rosenfeld MG, Lodish HF. Thyroid hormone receptor beta and NCOA4 regulate terminal erythrocyte differentiation. Proceedings of the National Academy of Sciences of the United States of America. PMID 28864529 DOI: 10.1073/Pnas.1711058114  0.507
2017 Yang F, Ma Q, Liu Z, Li W, Tan Y, Jin C, Ma W, Hu Y, Shen J, Ohgi KA, Telese F, Liu W, Rosenfeld MG. Glucocorticoid Receptor:MegaTrans Switching Mediates the Repression of an ERα-Regulated Transcriptional Program. Molecular Cell. 66: 321-331.e6. PMID 28475868 DOI: 10.1016/j.molcel.2017.03.019  0.559
2017 Füllgrabe J, Lynch-Day MA, Heldring N, Li W, Struijk RB, Ma Q, Hermanson O, Rosenfeld MG, Klionsky DJ, Joseph B. Corrigendum: The histone H4 lysine 16 acetyltransferase hMOF regulates the outcome of autophagy. Nature. PMID 28297710 DOI: 10.1038/Nature22027  0.38
2016 Li W, Notani D, Rosenfeld MG. Enhancers as non-coding RNA transcription units: recent insights and future perspectives. Nature Reviews. Genetics. PMID 26948815 DOI: 10.1038/nrg.2016.4  0.574
2015 Wang J, Telese F, Tan Y, Li W, Jin C, He X, Basnet H, Ma Q, Merkurjev D, Zhu X, Liu Z, Zhang J, Ohgi K, Taylor H, White RR, et al. LSD1n is an H4K20 demethylase regulating memory formation via transcriptional elongation control. Nature Neuroscience. PMID 26214369 DOI: 10.1038/Nn.4069  0.652
2015 Li W, Hu Y, Oh S, Ma Q, Merkurjev D, Song X, Zhou X, Liu Z, Tanasa B, He X, Chen AY, Ohgi K, Zhang J, Liu W, Rosenfeld MG. Condensin I and II Complexes License Full Estrogen Receptor α-Dependent Enhancer Activation. Molecular Cell. 59: 188-202. PMID 26166704 DOI: 10.1016/J.Molcel.2015.06.002  0.776
2015 Telese F, Ma Q, Perez PM, Notani D, Oh S, Li W, Comoletti D, Ohgi KA, Taylor H, Rosenfeld MG. LRP8-Reelin-Regulated Neuronal Enhancer Signature Underlying Learning and Memory Formation. Neuron. 86: 696-710. PMID 25892301 DOI: 10.1016/j.neuron.2015.03.033  0.732
2015 Puc J, Kozbial P, Li W, Tan Y, Liu Z, Suter T, Ohgi KA, Zhang J, Aggarwal AK, Rosenfeld MG. Ligand-dependent enhancer activation regulated by topoisomerase-I activity. Cell. 160: 367-80. PMID 25619691 DOI: 10.1016/J.Cell.2015.08.044  0.544
2015 Zhang F, Tanasa B, Merkurjev D, Lin C, Song X, Li W, Tan Y, Liu Z, Zhang J, Ohgi KA, Krones A, Skowronska-Krawczyk D, Rosenfeld MG. Enhancer-bound LDB1 regulates a corticotrope promoter-pausing repression program. Proceedings of the National Academy of Sciences of the United States of America. 112: 1380-5. PMID 25605944 DOI: 10.1073/Pnas.1424228112  0.69
2014 Liu Z, Merkurjev D, Yang F, Li W, Oh S, Friedman MJ, Song X, Zhang F, Ma Q, Ohgi KA, Krones A, Rosenfeld MG. Enhancer activation requires trans-recruitment of a mega transcription factor complex. Cell. 159: 358-73. PMID 25303530 DOI: 10.1016/J.Cell.2014.08.027  0.775
2014 Skowronska-Krawczyk D, Ma Q, Schwartz M, Scully K, Li W, Liu Z, Taylor H, Tollkuhn J, Ohgi KA, Notani D, Kohwi Y, Kohwi-Shigematsu T, Rosenfeld MG. Required enhancer-matrin-3 network interactions for a homeodomain transcription program. Nature. 514: 257-61. PMID 25119036 DOI: 10.1038/Nature13573  0.772
2014 Jin C, Yang L, Xie M, Lin C, Merkurjev D, Yang JC, Tanasa B, Oh S, Zhang J, Ohgi KA, Zhou H, Li W, Evans CP, Ding S, Rosenfeld MG. Chem-seq permits identification of genomic targets of drugs against androgen receptor regulation selected by functional phenotypic screens. Proceedings of the National Academy of Sciences of the United States of America. 111: 9235-40. PMID 24928520 DOI: 10.1073/Pnas.1404303111  0.713
2014 Lam MT, Li W, Rosenfeld MG, Glass CK. Enhancer RNAs and regulated transcriptional programs. Trends in Biochemical Sciences. 39: 170-82. PMID 24674738 DOI: 10.1016/j.tibs.2014.02.007  0.567
2013 Liu W, Ma Q, Wong K, Li W, Ohgi K, Zhang J, Aggarwal AK, Rosenfeld MG. Brd4 and JMJD6-associated anti-pause enhancers in regulation of transcriptional pause release. Cell. 155: 1581-95. PMID 24360279 DOI: 10.1016/J.Cell.2013.10.056  0.583
2013 Yang L, Lin C, Jin C, Yang JC, Tanasa B, Li W, Merkurjev D, Ohgi KA, Meng D, Zhang J, Evans CP, Rosenfeld MG. lncRNA-dependent mechanisms of androgen-receptor-regulated gene activation programs. Nature. 500: 598-602. PMID 23945587 DOI: 10.1038/nature12451  0.525
2013 Füllgrabe J, Lynch-Day MA, Heldring N, Li W, Struijk RB, Ma Q, Hermanson O, Rosenfeld MG, Klionsky DJ, Joseph B. The histone H4 lysine 16 acetyltransferase hMOF regulates the outcome of autophagy. Nature. 500: 468-71. PMID 23863932 DOI: 10.1038/Nature12313  0.491
2013 Li W, Notani D, Ma Q, Tanasa B, Nunez E, Chen AY, Merkurjev D, Zhang J, Ohgi K, Song X, Oh S, Kim HS, Glass CK, Rosenfeld MG. Functional roles of enhancer RNAs for oestrogen-dependent transcriptional activation. Nature. 498: 516-20. PMID 23728302 DOI: 10.1038/Nature12210  0.769
2012 Hu Q, Tanasa B, Trabucchi M, Li W, Zhang J, Ohgi KA, Rose DW, Glass CK, Rosenfeld MG. DICER- and AGO3-dependent generation of retinoic acid-induced DR2 Alu RNAs regulates human stem cell proliferation. Nature Structural & Molecular Biology. 19: 1168-75. PMID 23064648 DOI: 10.1038/nsmb.2400  0.519
2012 Yang L, Lin C, Nunez E, Li W, Destici E, Rosenfeld MG. Abstract IA3: Functional implications of relocation of regulated transcription units in prostate cancer Cancer Research. 72: IA3-IA3. DOI: 10.1158/1538-7445.Prca2012-Ia3  0.72
2011 Wang D, Garcia-Bassets I, Benner C, Li W, Su X, Zhou Y, Qiu J, Liu W, Kaikkonen MU, Ohgi KA, Glass CK, Rosenfeld MG, Fu XD. Reprogramming transcription by distinct classes of enhancers functionally defined by eRNA. Nature. 474: 390-4. PMID 21572438 DOI: 10.1038/Nature10006  0.627
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