| Year |
Citation |
Score |
| 2024 |
Damasceno FL, Alves Martins MV, Frontalini F, Pawlowski J, Cermakova K, Angeles IB, Costa Santos LG, Filho JGM, Francescangeli F, Senez-Mello TM, Castelo WFL, Rebouças RC, Duleba W, Mello E Sousa SH, Laut L, et al. Assessment of the ecological quality status of the Sepetiba Bay (SE Brazil): When metabarcoding meets morphology on foraminifera. Marine Environmental Research. 195: 106340. PMID 38232436 DOI: 10.1016/j.marenvres.2024.106340 |
0.393 |
|
| 2023 |
Barrenechea Angeles I, Romero-Martínez ML, Cavaliere M, Varrella S, Francescangeli F, Piredda R, Mazzocchi MG, Montresor M, Schirone A, Delbono I, Margiotta F, Corinaldesi C, Chiavarini S, Montereali MR, Rimauro J, ... ... Pawlowski J, et al. Encapsulated in sediments: eDNA deciphers the ecosystem history of one of the most polluted European marine sites. Environment International. 172: 107738. PMID 36641836 DOI: 10.1016/j.envint.2023.107738 |
0.377 |
|
| 2022 |
Gooday AJ, Holzmann M, Schwarzgruber E, Cedhagen T, Pawlowski J. Morphological and molecular diversity of monothalamids (Rhizaria, Foraminifera), including two new species and a new genus, from SW Greenland. European Journal of Protistology. 86: 125932. PMID 36347189 DOI: 10.1016/j.ejop.2022.125932 |
0.303 |
|
| 2022 |
Nguyen NL, Pawłowska J, Angeles IB, Zajaczkowski M, Pawłowski J. Metabarcoding reveals high diversity of benthic foraminifera linked to water masses circulation at coastal Svalbard. Geobiology. PMID 36259453 DOI: 10.1111/gbi.12530 |
0.445 |
|
| 2022 |
Macher JN, Bloska DM, Holzmann M, Girard EB, Pawlowski J, Renema W. Mitochondrial cytochrome c oxidase subunit I (COI) metabarcoding of Foraminifera communities using taxon-specific primers. Peerj. 10: e13952. PMID 36093332 DOI: 10.7717/peerj.13952 |
0.434 |
|
| 2022 |
Sierra R, Mauffrey F, Cruz J, Holzmann M, Gooday AJ, Maurer-Alcalá X, Thakur R, Greco M, Weiner AKM, Katz LA, Pawlowski J. Taxon-rich transcriptomics supports higher-level phylogeny and major evolutionary trends in Foraminifera. Molecular Phylogenetics and Evolution. 174: 107546. PMID 35690380 DOI: 10.1016/j.ympev.2022.107546 |
0.325 |
|
| 2022 |
Al-Enezi E, Francescangeli F, Balassi E, Borderie S, Al-Hazeem S, Al-Salameen F, Boota Anwar A, Pawlowski J, Frontalini F. Benthic foraminifera as proxies for the environmental quality assessment of the Kuwait Bay (Kuwait, Arabian Gulf): Morphological and metabarcoding approaches. The Science of the Total Environment. 833: 155093. PMID 35421459 DOI: 10.1016/j.scitotenv.2022.155093 |
0.383 |
|
| 2022 |
Greco M, Lejzerowicz F, Reo E, Caruso A, Maccotta A, Coccioni R, Pawlowski J, Frontalini F. Environmental RNA outperforms eDNA metabarcoding in assessing impact of marine pollution: A chromium-spiked mesocosm test. Chemosphere. 298: 134239. PMID 35292278 DOI: 10.1016/j.chemosphere.2022.134239 |
0.76 |
|
| 2022 |
Cordier T, Angeles IB, Henry N, Lejzerowicz F, Berney C, Morard R, Brandt A, Cambon-Bonavita MA, Guidi L, Lombard F, Arbizu PM, Massana R, Orejas C, Poulain J, Smith CR, ... ... Pawlowski J, et al. Patterns of eukaryotic diversity from the surface to the deep-ocean sediment. Science Advances. 8: eabj9309. PMID 35119936 DOI: 10.1126/sciadv.abj9309 |
0.754 |
|
| 2021 |
Charvoz L, Apothéloz-Perret-Gentil L, Reo E, Thiébaud J, Pawlowski J. Monitoring newt communities in urban area using eDNA metabarcoding. Peerj. 9: e12357. PMID 34900410 DOI: 10.7717/peerj.12357 |
0.303 |
|
| 2021 |
Majewski W, Holzmann M, Gooday AJ, Majda A, Mamos T, Pawlowski J. Cenozoic climatic changes drive evolution and dispersal of coastal benthic foraminifera in the Southern Ocean. Scientific Reports. 11: 19869. PMID 34615927 DOI: 10.1038/s41598-021-99155-6 |
0.326 |
|
| 2021 |
Le JT, Levin LA, Lejzerowicz F, Cordier T, Gooday AJ, Pawlowski J. Scientific and budgetary tradeoffs between morphological and molecular methods for deep-sea biodiversity assessment. Integrated Environmental Assessment and Management. PMID 34019727 DOI: 10.1002/ieam.4466 |
0.741 |
|
| 2021 |
He X, Gilmore SR, Sutherland TF, Hajibabaei M, Miller KM, Westfall KM, Pawlowski J, Abbott CL. Biotic signals associated with benthic impacts of salmon farms from eDNA metabarcoding of sediments. Molecular Ecology. PMID 33481325 DOI: 10.1111/mec.15814 |
0.45 |
|
| 2020 |
Barrenechea Angeles I, Lejzerowicz F, Cordier T, Scheplitz J, Kucera M, Ariztegui D, Pawlowski J, Morard R. Planktonic foraminifera eDNA signature deposited on the seafloor remains preserved after burial in marine sediments. Scientific Reports. 10: 20351. PMID 33230106 DOI: 10.1038/s41598-020-77179-8 |
0.753 |
|
| 2020 |
Mauffrey F, Cordier T, Apothéloz-Perret-Gentil L, Cermakova K, Merzi T, Delefosse M, Blanc P, Pawlowski J. Benthic monitoring of oil and gas offshore platforms in the North Sea using environmental DNA metabarcoding. Molecular Ecology. PMID 33070453 DOI: 10.1111/mec.15698 |
0.425 |
|
| 2020 |
Apothéloz-Perret-Gentil L, Bouchez A, Cordier T, Cordonier A, Guéguen J, Rimet F, Vasselon V, Pawlowski J. Monitoring the ecological status of rivers with diatom eDNA metabarcoding: A comparison of taxonomic markers and analytical approaches for the inference of a molecular diatom index. Molecular Ecology. PMID 32979002 DOI: 10.1111/mec.15646 |
0.304 |
|
| 2020 |
Pawlowski J, Apothéloz-Perret-Gentil L, Altermatt F. Environmental DNA: What's behind the term? Clarifying the terminology and recommendations for its future use in biomonitoring. Molecular Ecology. 29: 4258-4264. PMID 32966665 DOI: 10.1111/mec.15643 |
0.358 |
|
| 2020 |
Pawłowska J, Wollenburg JE, Zajączkowski M, Pawlowski J. Planktonic foraminifera genomic variations reflect paleoceanographic changes in the Arctic: evidence from sedimentary ancient DNA. Scientific Reports. 10: 15102. PMID 32934321 DOI: 10.1038/s41598-020-72146-9 |
0.445 |
|
| 2020 |
Frontalini F, Cordier T, Balassi E, Armynot du Chatelet E, Cermakova K, Apothéloz-Perret-Gentil L, Martins MVA, Bucci C, Scantamburlo E, Treglia M, Bonamin V, Pawlowski J. Benthic foraminiferal metabarcoding and morphology-based assessment around three offshore gas platforms: Congruence and complementarity. Environment International. 144: 106049. PMID 32835923 DOI: 10.1016/j.envint.2020.106049 |
0.431 |
|
| 2020 |
Cordier T, Alonso-Sáez L, Apothéloz-Perret-Gentil L, Aylagas E, Bohan DA, Bouchez A, Chariton A, Creer S, Frühe L, Keck F, Keeley N, Laroche O, Leese F, Pochon X, Stoeck T, ... Pawlowski J, et al. Ecosystems monitoring powered by environmental genomics: A review of current strategies with an implementation roadmap. Molecular Ecology. 30: 2937-2958. PMID 32416615 DOI: 10.1111/mec.15472 |
0.314 |
|
| 2020 |
Pawłowska J, Pawlowski J, Zajączkowski M. Dataset of foraminiferal sedimentary DNA (DNA) sequences from Svalbard. Data in Brief. 30: 105553. PMID 32346576 DOI: 10.1016/j.dib.2020.105553 |
0.359 |
|
| 2020 |
Frühe L, Cordier T, Dully V, Breiner HW, Lentendu G, Pawlowski J, Martins C, Wilding TA, Stoeck T. Supervised machine learning is superior to indicator value inference in monitoring the environmental impacts of salmon aquaculture using eDNA metabarcodes. Molecular Ecology. 30: 2988-3006. PMID 32285497 DOI: 10.1111/mec.15434 |
0.399 |
|
| 2020 |
Vivien R, Apothéloz-Perret-Gentil L, Pawlowski J, Werner I, Lafont M, Ferrari BJD. High-throughput DNA barcoding of oligochaetes for abundance-based indices to assess the biological quality of sediments in streams and lakes. Scientific Reports. 10: 2041. PMID 32029757 DOI: 10.1038/s41598-020-58703-2 |
0.469 |
|
| 2019 |
Cordier T, Frontalini F, Cermakova K, Apothéloz-Perret-Gentil L, Treglia M, Scantamburlo E, Bonamin V, Pawlowski J. Multi-marker eDNA metabarcoding survey to assess the environmental impact of three offshore gas platforms in the North Adriatic Sea (Italy). Marine Environmental Research. 146: 24-34. PMID 30890270 DOI: 10.1016/j.marenvres.2018.12.009 |
0.421 |
|
| 2019 |
Dufresne Y, Lejzerowicz F, Perret-Gentil LA, Pawlowski J, Cordier T. SLIM: a flexible web application for the reproducible processing of environmental DNA metabarcoding data. Bmc Bioinformatics. 20: 88. PMID 30782112 DOI: 10.1186/s12859-019-2663-2 |
0.747 |
|
| 2019 |
He X, Sutherland TF, Pawlowski J, Abbott CL. Responses of foraminifera communities to aquaculture-derived organic enrichment as revealed by environmental DNA metabarcoding. Molecular Ecology. PMID 30614581 DOI: 10.1111/mec.15007 |
0.48 |
|
| 2018 |
Piredda R, Claverie JM, Decelle J, de Vargas C, Dunthorn M, Edvardsen B, Eikrem W, Forster D, Kooistra WHCF, Logares R, Massana R, Montresor M, Not F, Ogata H, Pawlowski J, et al. Diatom diversity through HTS-metabarcoding in coastal European seas. Scientific Reports. 8: 18059. PMID 30584235 DOI: 10.1038/S41598-018-36345-9 |
0.435 |
|
| 2018 |
Adl SM, Bass D, Lane CE, Lukeš J, Schoch CL, Smirnov A, Agatha S, Berney C, Brown MW, Burki F, Cárdenas P, Čepička I, Chistyakova L, Del Campo J, Dunthorn M, ... ... Pawlowski JW, et al. Revisions to the Classification, Nomenclature, and Diversity of Eukaryotes. The Journal of Eukaryotic Microbiology. PMID 30257078 DOI: 10.1111/Jeu.12691 |
0.395 |
|
| 2018 |
Kudryavtsev A, Pawlowski J, Smirnov A. More amoebae from the deep-sea: Two new marine species of Vexillifera (Amoebozoa, Dactylopodida) with notes on taxonomy of the genus. European Journal of Protistology. 66: 9-25. PMID 30086474 DOI: 10.1016/j.ejop.2018.07.001 |
0.351 |
|
| 2018 |
Forster D, Filker S, Kochems R, Breiner HW, Cordier T, Pawlowski J, Stoeck T. A Comparison of Different Ciliate Metabarcode Genes as Bioindicators for Environmental Impact Assessments of Salmon Aquaculture. The Journal of Eukaryotic Microbiology. 66: 294-308. PMID 30028566 DOI: 10.1111/jeu.12670 |
0.313 |
|
| 2018 |
Cordier T, Forster D, Dufresne Y, Martins CIM, Stoeck T, Pawlowski J. Supervised machine learning outperforms taxonomy-based environmental DNA metabarcoding applied to biomonitoring. Molecular Ecology Resources. 18: 1381-1391. PMID 30014577 DOI: 10.1111/1755-0998.12926 |
0.41 |
|
| 2018 |
Pawlowski J, Kelly-Quinn M, Altermatt F, Apothéloz-Perret-Gentil L, Beja P, Boggero A, Borja A, Bouchez A, Cordier T, Domaizon I, Feio MJ, Filipe AF, Fornaroli R, Graf W, Herder J, et al. The future of biotic indices in the ecogenomic era: Integrating (e)DNA metabarcoding in biological assessment of aquatic ecosystems. The Science of the Total Environment. 637: 1295-1310. PMID 29801222 DOI: 10.1016/j.scitotenv.2018.05.002 |
0.416 |
|
| 2018 |
Lefrançois E, Apothéloz-Perret-Gentil L, Blancher P, Botreau S, Chardon C, Crepin L, Cordier T, Cordonier A, Domaizon I, Ferrari BJD, Guéguen J, Hustache JC, Jacas L, Jacquet S, Lacroix S, ... ... Pawlowski J, et al. Development and implementation of eco-genomic tools for aquatic ecosystem biomonitoring: the SYNAQUA French-Swiss program. Environmental Science and Pollution Research International. PMID 29732510 DOI: 10.1007/s11356-018-2172-2 |
0.355 |
|
| 2018 |
Frontalini F, Greco M, Di Bella L, Lejzerowicz F, Reo E, Caruso A, Cosentino C, Maccotta A, Scopelliti G, Nardelli MP, Losada MT, Armynot du Châtelet E, Coccioni R, Pawlowski J. Assessing the effect of mercury pollution on cultured benthic foraminifera community using morphological and eDNA metabarcoding approaches. Marine Pollution Bulletin. 129: 512-524. PMID 29033170 DOI: 10.1016/j.marpolbul.2017.10.022 |
0.737 |
|
| 2017 |
Stoeck T, Frühe L, Forster D, Cordier T, Martins CIM, Pawlowski J. Environmental DNA metabarcoding of benthic bacterial communities indicates the benthic footprint of salmon aquaculture. Marine Pollution Bulletin. 127: 139-149. PMID 29475645 DOI: 10.1016/j.marpolbul.2017.11.065 |
0.382 |
|
| 2017 |
Vivien R, Holzmann M, Werner I, Pawlowski J, Lafont M, Ferrari BJD. Cytochrome c oxidase barcodes for aquatic oligochaete identification: development of a Swiss reference database. Peerj. 5: e4122. PMID 29230362 DOI: 10.7717/peerj.4122 |
0.395 |
|
| 2017 |
Borrelli C, Hou Y, Pawlowski JW, Holzmann M, Katz ME, Chandler GT, Bowser SS. Assessing SSU rDNA Barcodes in Foraminifera: A Case Study using Bolivina quadrata. The Journal of Eukaryotic Microbiology. PMID 28865158 DOI: 10.1111/Jeu.12471 |
0.321 |
|
| 2017 |
Cordier T, Esling P, Lejzerowicz F, Visco J, Ouadahi A, Martins C, Cedhagen T, Pawlowski J. Predicting the Ecological Quality Status of Marine Environments from eDNA Metabarcoding Data Using Supervised Machine Learning. Environmental Science & Technology. 51: 9118-9126. PMID 28665601 DOI: 10.1021/acs.est.7b01518 |
0.76 |
|
| 2017 |
Siemensma F, Apothéloz-Perret-Gentil L, Holzmann M, Clauss S, Völcker E, Pawlowski J. Taxonomic revision of freshwater foraminifera with the description of two new agglutinated species and genera. European Journal of Protistology. 60: 28-44. PMID 28609684 DOI: 10.1016/j.ejop.2017.05.006 |
0.382 |
|
| 2017 |
Apothéloz-Perret-Gentil L, Cordonier A, Straub F, Iseli J, Esling P, Pawlowski J. Taxonomy-free molecular diatom index for high-throughput eDNA biomonitoring. Molecular Ecology Resources. 17: 1231-1242. PMID 28296259 DOI: 10.1111/1755-0998.12668 |
0.418 |
|
| 2016 |
Laroche O, Wood SA, Tremblay LA, Ellis JI, Lejzerowicz F, Pawlowski J, Lear G, Atalah J, Pochon X. First evaluation of foraminiferal metabarcoding for monitoring environmental impact from an offshore oil drilling site. Marine Environmental Research. 120: 225-235. PMID 27595900 DOI: 10.1016/j.marenvres.2016.08.009 |
0.731 |
|
| 2016 |
Vivien R, Ferrari BJ, Pawlowski J. DNA barcoding of formalin-fixed aquatic oligochaetes for biomonitoring. Bmc Research Notes. 9: 342. PMID 27411567 DOI: 10.1186/s13104-016-2140-1 |
0.372 |
|
| 2016 |
Forster D, Dunthorn M, Mahé F, Dolan JR, Audic S, Bass D, Bittner L, Boutte C, Christen R, Claverie JM, Decelle J, Edvardsen B, Egge E, Eikrem W, Gobet A, ... ... Pawlowski J, et al. Benthic protists: the under-charted majority. Fems Microbiology Ecology. PMID 27267932 DOI: 10.1093/Femsec/Fiw120 |
0.426 |
|
| 2016 |
Vivien R, Lejzerowicz F, Pawlowski J. Next-Generation Sequencing of Aquatic Oligochaetes: Comparison of Experimental Communities. Plos One. 11: e0148644. PMID 26866802 DOI: 10.1371/journal.pone.0148644 |
0.778 |
|
| 2015 |
Merkado G, Titelboim D, Hyams-Kaphzan O, Holzmann M, Pawlowski J, Almogi-Labin A, Abdu U, Herut B, Abramovich S. Molecular Phylogeny and Ecology of Textularia agglutinans d'Orbigny from the Mediterranean Coast of Israel: A Case of a Successful New Incumbent. Plos One. 10: e0142263. PMID 26539992 DOI: 10.1371/Journal.Pone.0142263 |
0.344 |
|
| 2015 |
Lejzerowicz F, Esling P, Pillet L, Wilding TA, Black KD, Pawlowski J. High-throughput sequencing and morphology perform equally well for benthic monitoring of marine ecosystems. Scientific Reports. 5: 13932. PMID 26355099 DOI: 10.1038/srep13932 |
0.795 |
|
| 2015 |
Voltski I, Pawlowski J. Flexammina islandica gen. nov. sp. nov. and some new phylotypes of monothalamous foraminifera from the coast of Iceland. Zootaxa. 3964: 245-59. PMID 26249434 DOI: 10.11646/zootaxa.3964.2.5 |
0.364 |
|
| 2015 |
Massana R, Gobet A, Audic S, Bass D, Bittner L, Boutte C, Chambouvet A, Christen R, Claverie JM, Decelle J, Dolan JR, Dunthorn M, Edvardsen B, Forn I, Forster D, ... ... Pawlowski J, et al. Marine protist diversity in European coastal waters and sediments as revealed by high-throughput sequencing. Environmental Microbiology. 17: 4035-49. PMID 26119494 DOI: 10.1111/1462-2920.12955 |
0.443 |
|
| 2015 |
Visco JA, Apothéloz-Perret-Gentil L, Cordonier A, Esling P, Pillet L, Pawlowski J. Environmental Monitoring: Inferring the Diatom Index from Next-Generation Sequencing Data. Environmental Science & Technology. 49: 7597-605. PMID 26052741 DOI: 10.1021/es506158m |
0.473 |
|
| 2015 |
Vivien R, Wyler S, Lafont M, Pawlowski J. Molecular barcoding of aquatic oligochaetes: implications for biomonitoring. Plos One. 10: e0125485. PMID 25856230 DOI: 10.1371/journal.pone.0125485 |
0.464 |
|
| 2015 |
Balzano S, Corre E, Decelle J, Sierra R, Wincker P, Da Silva C, Poulain J, Pawlowski J, Not F. Transcriptome analyses to investigate symbiotic relationships between marine protists. Frontiers in Microbiology. 6: 98. PMID 25852650 DOI: 10.3389/Fmicb.2015.00098 |
0.358 |
|
| 2015 |
Esling P, Lejzerowicz F, Pawlowski J. Accurate multiplexing and filtering for high-throughput amplicon-sequencing. Nucleic Acids Research. 43: 2513-24. PMID 25690897 DOI: 10.1093/nar/gkv107 |
0.73 |
|
| 2014 |
Apothéloz-Perret-Gentil L, Pawlowski J. Molecular Phylogeny and Morphology of Leannia veloxifera n. gen. et sp. Unveils a New Lineage of Monothalamous Foraminifera. The Journal of Eukaryotic Microbiology. 62: 353-61. PMID 25363489 DOI: 10.1111/jeu.12190 |
0.372 |
|
| 2014 |
Weber AA, Pawlowski J. Wide occurrence of SSU rDNA intragenomic polymorphism in foraminifera and its implications for molecular species identification. Protist. 165: 645-61. PMID 25150612 DOI: 10.1016/j.protis.2014.07.006 |
0.318 |
|
| 2014 |
Keeling PJ, Burki F, Wilcox HM, Allam B, Allen EE, Amaral-Zettler LA, Armbrust EV, Archibald JM, Bharti AK, Bell CJ, Beszteri B, Bidle KD, Cameron CT, Campbell L, Caron DA, ... ... Pawlowski J, et al. The Marine Microbial Eukaryote Transcriptome Sequencing Project (MMETSP): illuminating the functional diversity of eukaryotic life in the oceans through transcriptome sequencing. Plos Biology. 12: e1001889. PMID 24959919 DOI: 10.1371/Journal.Pbio.1001889 |
0.408 |
|
| 2014 |
Pawlowski J, Esling P, Lejzerowicz F, Cedhagen T, Wilding TA. Environmental monitoring through protist next-generation sequencing metabarcoding: assessing the impact of fish farming on benthic foraminifera communities. Molecular Ecology Resources. 14: 1129-40. PMID 24734911 DOI: 10.1111/1755-0998.12261 |
0.787 |
|
| 2014 |
Logares R, Audic S, Bass D, Bittner L, Boutte C, Christen R, Claverie JM, Decelle J, Dolan JR, Dunthorn M, Edvardsen B, Gobet A, Kooistra WH, Mahé F, Not F, ... ... Pawlowski J, et al. Patterns of rare and abundant marine microbial eukaryotes. Current Biology : Cb. 24: 813-21. PMID 24704080 DOI: 10.1016/J.Cub.2014.02.050 |
0.322 |
|
| 2013 |
Lejzerowicz F, Esling P, Majewski W, Szczuciński W, Decelle J, Obadia C, Arbizu PM, Pawlowski J. Ancient DNA complements microfossil record in deep-sea subsurface sediments. Biology Letters. 9: 20130283. PMID 23658006 DOI: 10.1098/Rsbl.2013.0283 |
0.756 |
|
| 2013 |
Weber AA, Pawlowski J. Can abundance of protists be inferred from sequence data: a case study of foraminifera. Plos One. 8: e56739. PMID 23431390 DOI: 10.1371/journal.pone.0056739 |
0.41 |
|
| 2013 |
Sierra R, Matz MV, Aglyamova G, Pillet L, Decelle J, Not F, de Vargas C, Pawlowski J. Deep relationships of Rhizaria revealed by phylogenomics: a farewell to Haeckel's Radiolaria. Molecular Phylogenetics and Evolution. 67: 53-9. PMID 23280368 DOI: 10.1016/J.Ympev.2012.12.011 |
0.303 |
|
| 2013 |
Guillou L, Bachar D, Audic S, Bass D, Berney C, Bittner L, Boutte C, Burgaud G, de Vargas C, Decelle J, Del Campo J, Dolan JR, Dunthorn M, Edvardsen B, Holzmann M, ... ... Pawlowski J, et al. The Protist Ribosomal Reference database (PR2): a catalog of unicellular eukaryote small sub-unit rRNA sequences with curated taxonomy. Nucleic Acids Research. 41: D597-604. PMID 23193267 DOI: 10.1093/Nar/Gks1160 |
0.347 |
|
| 2011 |
Lecroq B, Lejzerowicz F, Bachar D, Christen R, Esling P, Baerlocher L, Østerås M, Farinelli L, Pawlowski J. Ultra-deep sequencing of foraminiferal microbarcodes unveils hidden richness of early monothalamous lineages in deep-sea sediments. Proceedings of the National Academy of Sciences of the United States of America. 108: 13177-82. PMID 21788523 DOI: 10.1073/pnas.1018426108 |
0.779 |
|
| 2011 |
Kudryavtsev A, Wylezich C, Pawlowski J. Ovalopodium desertum n. sp. and the phylogenetic relationships of Cochliopodiidae (Amoebozoa). Protist. 162: 571-89. PMID 21602100 DOI: 10.1016/j.protis.2011.04.002 |
0.333 |
|
| 2011 |
Pawlowski J, Christen R, Lecroq B, Bachar D, Shahbazkia HR, Amaral-Zettler L, Guillou L. Eukaryotic richness in the abyss: insights from pyrotag sequencing. Plos One. 6: e18169. PMID 21483744 DOI: 10.1371/Journal.Pone.0018169 |
0.505 |
|
| 2011 |
Heger TJ, Pawlowski J, Lara E, Leander BS, Todorov M, Golemansky V, Mitchell EA. Comparing potential COI and SSU rDNA barcodes for assessing the diversity and phylogenetic relationships of cyphoderiid testate amoebae (Rhizaria: Euglyphida). Protist. 162: 131-41. PMID 20702136 DOI: 10.1016/j.protis.2010.05.002 |
0.392 |
|
| 2010 |
Lejzerowicz F, Pawlowski J, Fraissinet-Tachet L, Marmeisse R. Molecular evidence for widespread occurrence of Foraminifera in soils. Environmental Microbiology. 12: 2518-26. PMID 20406290 DOI: 10.1111/j.1462-2920.2010.02225.x |
0.75 |
|
| 2010 |
Pawlowski J, Lecroq B. Short rDNA barcodes for species identification in foraminifera. The Journal of Eukaryotic Microbiology. 57: 197-205. PMID 20113377 DOI: 10.1111/j.1550-7408.2009.00468.x |
0.394 |
|
| 2010 |
Heger TJ, Mitchell EA, Todorov M, Golemansky V, Lara E, Leander BS, Pawlowski J. Molecular phylogeny of euglyphid testate amoebae (Cercozoa: Euglyphida) suggests transitions between marine supralittoral and freshwater/terrestrial environments are infrequent. Molecular Phylogenetics and Evolution. 55: 113-22. PMID 20004728 DOI: 10.1016/j.ympev.2009.11.023 |
0.438 |
|
| 2009 |
Burki F, Inagaki Y, Bråte J, Archibald JM, Keeling PJ, Cavalier-Smith T, Sakaguchi M, Hashimoto T, Horak A, Kumar S, Klaveness D, Jakobsen KS, Pawlowski J, Shalchian-Tabrizi K. Large-scale phylogenomic analyses reveal that two enigmatic protist lineages, telonemia and centroheliozoa, are related to photosynthetic chromalveolates. Genome Biology and Evolution. 1: 231-8. PMID 20333193 DOI: 10.1093/Gbe/Evp022 |
0.332 |
|
| 2009 |
Nassonova E, Smirnov A, Fahrni J, Pawlowski J. Barcoding amoebae: comparison of SSU, ITS and COI genes as tools for molecular identification of naked lobose amoebae. Protist. 161: 102-15. PMID 19819756 DOI: 10.1016/j.protis.2009.07.003 |
0.329 |
|
| 2009 |
Smirnov A, Nassonova E, Fahrni J, Pawlowski J. Rhizamoeba neglecta n. sp. (Amoebozoa, Tubulinea) from the bottom sediments of freshwater Lake Leshevoe (Valamo Island, North-Western Russia), with notes on the phylogeny of the order Leptomyxida. European Journal of Protistology. 45: 251-9. PMID 19651498 DOI: 10.1016/j.ejop.2009.04.002 |
0.348 |
|
| 2009 |
Pawlowski J, Burki F. Untangling the phylogeny of amoeboid protists. The Journal of Eukaryotic Microbiology. 56: 16-25. PMID 19335771 DOI: 10.1111/j.1550-7408.2008.00379.x |
0.399 |
|
| 2008 |
Sinniger F, Reimer JD, Pawlowski J. Potential of DNA sequences to identify zoanthids (Cnidaria: Zoantharia). Zoological Science. 25: 1253-60. PMID 19267653 DOI: 10.2108/zsj.25.1253 |
0.314 |
|
| 2007 |
Brandt A, Gooday AJ, Brandão SN, Brix S, Brökeland W, Cedhagen T, Choudhury M, Cornelius N, Danis B, De Mesel I, Diaz RJ, Gillan DC, Ebbe B, Howe JA, Janussen D, ... ... Pawlowski J, et al. First insights into the biodiversity and biogeography of the Southern Ocean deep sea. Nature. 447: 307-11. PMID 17507981 DOI: 10.1038/Nature05827 |
0.373 |
|
| 2006 |
Burki F, Pawlowski J. Monophyly of Rhizaria and multigene phylogeny of unicellular bikonts. Molecular Biology and Evolution. 23: 1922-30. PMID 16829542 DOI: 10.1093/molbev/msl055 |
0.307 |
|
| 2005 |
Belbahri L, Calmin G, Pawlowski J, Lefort F. Phylogenetic analysis and real time PCR detection of a presumbably undescribed Peronospora species on sweet basil and sage. Mycological Research. 109: 1276-87. PMID 16279421 DOI: 10.1017/s0953756205003928 |
0.301 |
|
| 2005 |
Nikolaev SI, Mitchell EA, Petrov NB, Berney C, Fahrni J, Pawlowski J. The testate lobose amoebae (order Arcellinida Kent, 1880) finally find their home within Amoebozoa. Protist. 156: 191-202. PMID 16171186 |
0.325 |
|
| 2005 |
Pochon X, Montoya-Burgos JI, Stadelmann B, Pawlowski J. Molecular phylogeny, evolutionary rates, and divergence timing of the symbiotic dinoflagellate genus Symbiodinium. Molecular Phylogenetics and Evolution. 38: 20-30. PMID 15978847 DOI: 10.1016/j.ympev.2005.04.028 |
0.306 |
|
| 2005 |
Fiore-Donno AM, Berney C, Pawlowski J, Baldauf SL. higher-order phylogeny of plasmodial slime molds (Myxogastria) based on elongation factor 1-A and small subunit rRNA gene sequences. The Journal of Eukaryotic Microbiology. 52: 201-10. PMID 15926995 DOI: 10.1111/J.1550-7408.2005.00032.X |
0.323 |
|
| 2004 |
Berney C, Fahrni J, Pawlowski J. How many novel eukaryotic 'kingdoms'? Pitfalls and limitations of environmental DNA surveys. Bmc Biology. 2: 13. PMID 15176975 DOI: 10.1186/1741-7007-2-13 |
0.428 |
|
| 2004 |
Nikolaev SI, Berney C, Fahrni JF, Bolivar I, Polet S, Mylnikov AP, Aleshin VV, Petrov NB, Pawlowski J. The twilight of Heliozoa and rise of Rhizaria, an emerging supergroup of amoeboid eukaryotes. Proceedings of the National Academy of Sciences of the United States of America. 101: 8066-71. PMID 15148395 DOI: 10.1073/pnas.0308602101 |
0.347 |
|
| 2004 |
Habura A, Pawlowski J, Hanes SD, Bowser SS. Unexpected foraminiferal diversity revealed by small-subunit rDNA analysis of Antarctic sediment. The Journal of Eukaryotic Microbiology. 51: 173-9. PMID 15134252 DOI: 10.1111/J.1550-7408.2004.Tb00542.X |
0.449 |
|
| 2003 |
Pawlowski J, Holzmann M, Fahrni J, Richardson SL. Small subunit ribosomal DNA suggests that the xenophyophorean Syringammina corbicula is a foraminiferan. The Journal of Eukaryotic Microbiology. 50: 483-7. PMID 14733441 DOI: 10.1111/j.1550-7408.2003.tb00275.x |
0.342 |
|
| 2003 |
Holzmann M, Habura A, Giles H, Bowser SS, Pawlowski J. Freshwater foraminiferans revealed by analysis of environmental DNA samples. The Journal of Eukaryotic Microbiology. 50: 135-9. PMID 12744527 DOI: 10.1111/j.1550-7408.2003.tb00248.x |
0.496 |
|
| 2003 |
Burki F, Berney C, Pawlowski J. Phylogenetic position of Gromia oviformis Dujardin inferred from nuclear-encoded small subunit ribosomal DNA. Protist. 153: 251-60. PMID 12389814 DOI: 10.1078/1434-4610-00102 |
0.377 |
|
| Show low-probability matches. |