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Yilei Fu - Publications

Affiliations: 
Rice University, Houston, TX 
Area:
Bioinformatics
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8 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Wang MX, Lou EG, Sapoval N, Kim E, Kalvapalle P, Kille B, Elworth RAL, Liu Y, Fu Y, Stadler LB, Treangen TJ. Olivar: fully automated and variant aware primer design for multiplex tiled amplicon sequencing of pathogen genomes. Biorxiv : the Preprint Server For Biology. PMID 36824759 DOI: 10.1101/2023.02.11.528155  0.48
2022 Park SH, Cao M, Pan Y, Davis TH, Saxena L, Deshmukh H, Fu Y, Treangen T, Sheehan VA, Bao G. Comprehensive analysis and accurate quantification of unintended large gene modifications induced by CRISPR-Cas9 gene editing. Science Advances. 8: eabo7676. PMID 36269834 DOI: 10.1126/sciadv.abo7676  0.541
2022 Walker K, Kalra D, Lowdon R, Chen G, Molik D, Soto DC, Dabbaghie F, Khleifat AA, Mahmoud M, Paulin LF, Raza MS, Pfeifer SP, Agustinho DP, Aliyev E, Avdeyev P, ... ... Fu Y, et al. The third international hackathon for applying insights into large-scale genomic composition to use cases in a wide range of organisms. F1000research. 11: 530. PMID 36262335 DOI: 10.12688/f1000research.110194.1  0.552
2022 Balaji A, Sapoval N, Seto C, Leo Elworth RA, Fu Y, Nute MG, Savidge T, Segarra S, Treangen TJ. KOMB: K-core based de novo characterization of copy number variation in microbiomes. Computational and Structural Biotechnology Journal. 20: 3208-3222. PMID 35832621 DOI: 10.1016/j.csbj.2022.06.019  0.54
2021 Fu Y, Mahmoud M, Muraliraman VV, Sedlazeck FJ, Treangen TJ. Vulcan: Improved long-read mapping and structural variant calling via dual-mode alignment. Gigascience. 10. PMID 34561697 DOI: 10.1093/gigascience/giab063  0.551
2019 Guo H, Liu B, Guan D, Fu Y, Wang Y. Fast read alignment with incorporation of known genomic variants. Bmc Medical Informatics and Decision Making. 19: 265. PMID 31856811 DOI: 10.1186/s12911-019-0960-3  0.407
2019 Guo H, Fu Y, Gao Y, Li J, Wang Y, Liu B. deGSM: memory scalable construction of large scale de Bruijn Graph. Ieee/Acm Transactions On Computational Biology and Bioinformatics. PMID 31056509 DOI: 10.1109/TCBB.2019.2913932  0.311
2019 Jiang T, Fu Y, Liu B, Wang Y. Long-Read based Novel Sequence Insertion Detection with rCANID. Ieee Transactions On Nanobioscience. PMID 30946672 DOI: 10.1109/TNB.2019.2908438  0.383
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