Alejandro Sanchez-Flores - Publications

Affiliations: 
Wellcome Sanger Institute 

24/85 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 García-López R, Rivera-Gutiérrez X, Rosales-Rivera M, Zárate S, Muñoz-Medina JE, Roche B, Herrera-Estrella A, Gómez-Gil B, Sanchez-Flores A, Taboada B, Arias CF. SARS-CoV-2 BW lineage, a fast-growing Omicron variant from southeast Mexico bearing relevant escape mutations. Infection. 1-7. PMID 37058241 DOI: 10.1007/s15010-023-02034-7  0.348
2023 Singh P, Lonardi S, Liang Q, Vydyam P, Khabirova E, Fang T, Gihaz S, Thekkiniath J, Munshi M, Abel S, Ciampossin L, Batugedara G, Gupta M, Lu XM, Lenz T, et al. Babesia duncani multi-omics identifies virulence factors and drug targets. Nature Microbiology. PMID 37055610 DOI: 10.1038/s41564-023-01360-8  0.546
2021 Taboada B, Zárate S, Iša P, Boukadida C, Vazquez-Perez JA, Muñoz-Medina JE, Ramírez-González JE, Comas-García A, Grajales-Muñiz C, Rincón-Rubio A, Matías-Florentino M, Sanchez-Flores A, Mendieta-Condado E, Verleyen J, Barrera-Badillo G, et al. Genetic Analysis of SARS-CoV-2 Variants in Mexico during the First Year of the COVID-19 Pandemic. Viruses. 13. PMID 34834967 DOI: 10.3390/v13112161  0.306
2021 Fernández-Garcia M, Sanchez-Flores A, Gonzalez LM, Barbas C, Rey-Stolle MF, Sevilla E, García A, Montero E. Integration of Functional Genomic, Transcriptomic, and Metabolomic Data to Identify Key Features in Genomic Expression, Metabolites, and Metabolic Pathways of Babesia divergens. Methods in Molecular Biology (Clifton, N.J.). 2369: 217-249. PMID 34313992 DOI: 10.1007/978-1-0716-1681-9_13  0.446
2018 Contreras-Castro L, Maldonado LA, Quintana ET, Raggi L, Sánchez-Flores A. Draft Genome Sequence of Two Marine Plantactinospora spp. from the Gulf of California. Genome Announcements. 6. PMID 29798922 DOI: 10.1128/genomeA.00436-18  0.346
2017 García CF, Pedrini N, Sánchez-Paz A, Reyna-Blanco CS, Lavarias S, Muhlia-Almazán A, Fernández-Giménez A, Laino A, de-la-Re-Vega E, Lukaszewicz G, López-Zavala AA, Brieba LG, Criscitello MF, Carrasco-Miranda JS, García-Orozco KD, ... ... Sanchez-Flores A, et al. De novo assembly and transcriptome characterization of the freshwater prawn Palaemonetes argentinus: Implications for a detoxification response. Marine Genomics. PMID 28923556 DOI: 10.1016/J.Margen.2017.08.009  0.396
2017 Sandoval-Azuara SE, Perea-Jacobo R, Muñiz-Salazar R, Robbe-Austerman S, Perera-Ortiz A, López-Valencia G, Bravo DM, Sanchez-Flores A, Miranda-Guzmán D, Flores-López CA, Zenteno-Cuevas R, Laniado-Laborín R, Lafarga de la Cruz F, Stuber TP. Whole genome sequencing of Mycobacterium bovis to obtain molecular fingerprints in human and cattle isolates from Baja California, Mexico. International Journal of Infectious Diseases : Ijid : Official Publication of the International Society For Infectious Diseases. PMID 28739421 DOI: 10.1016/J.Ijid.2017.07.012  0.354
2016 Sanchez-Flores A, Penazola F, Carpinteyro-Ponce J, Nazario-Yepiz N, Abreu-Goodger C, Machado CA, Markow TA. Genome Evolution in Three Species of Cactophilic Drosophila. G3 (Bethesda, Md.). PMID 27489210 DOI: 10.1534/G3.116.033779  0.342
2016 Hunt VL, Tsai IJ, Coghlan A, Reid AJ, Holroyd N, Foth BJ, Tracey A, Cotton JA, Stanley EJ, Beasley H, Bennett HM, Brooks K, Harsha B, Kajitani R, Kulkarni A, ... ... Sanchez-Flores A, et al. The genomic basis of parasitism in the Strongyloides clade of nematodes. Nature Genetics. PMID 26829753 DOI: 10.1038/Ng.3495  0.734
2015 Fontes-Perez H, Olvera-García M, Chávez-Martínez A, Rodriguez-Almeida FA, Arzola-Alvarez CA, Sanchez-Flores A, Corral-Luna A. Genome Sequence of Citrobacter sp. CtB7.12, Isolated from the Gut of the Desert Subterranean Termite Heterotermes aureus. Genome Announcements. 3. PMID 26543121 DOI: 10.1128/genomeA.01290-15  0.337
2015 Olvera-García M, Fontes-Perez H, Chávez-Martínez A, Ruiz Barrera O, Rodríguez-Almeida FA, Sanchez-Flores A, Corral-Luna A. Draft Genome Sequences for Five Strains of Trabulsiella odontotermitis, Isolated from Heterotermes sp. Termite Gut. Genome Announcements. 3. PMID 26543120 DOI: 10.1128/genomeA.01289-15  0.431
2015 Gomez-Angulo J, Vega-Alvarado L, Escalante-García Z, Grande R, Gschaedler-Mathis A, Amaya-Delgado L, Arrizon J, Sanchez-Flores A. Genome Sequence of Torulaspora delbrueckii NRRL Y-50541, Isolated from Mezcal Fermentation. Genome Announcements. 3. PMID 26205871 DOI: 10.1128/Genomea.00438-15  0.416
2015 Velez P, Alejandri-Ramírez ND, González MC, Estrada KJ, Sanchez-Flores A, Dinkova TD. Comparative Transcriptome Analysis of the Cosmopolitan Marine Fungus Corollospora maritima Under Two Physiological Conditions. G3 (Bethesda, Md.). 5: 1805-14. PMID 26116293 DOI: 10.1534/g3.115.019620  0.31
2015 Vega-Alvarado L, Gómez-Angulo J, Escalante-García Z, Grande R, Gschaedler-Mathis A, Amaya-Delgado L, Sanchez-Flores A, Arrizon J. High-Quality Draft Genome Sequence of Candida apicola NRRL Y-50540. Genome Announcements. 3. PMID 26067948 DOI: 10.1128/Genomea.00437-15  0.381
2015 Glover L, Alsford S, Baker N, Turner DJ, Sanchez-Flores A, Hutchinson S, Hertz-Fowler C, Berriman M, Horn D. Genome-scale RNAi screens for high-throughput phenotyping in bloodstream-form African trypanosomes. Nature Protocols. 10: 106-33. PMID 25502887 DOI: 10.1038/Nprot.2015.005  0.582
2014 Ghaffari N, Sanchez-Flores A, Doan R, Garcia-Orozco KD, Chen PL, Ochoa-Leyva A, Lopez-Zavala AA, Carrasco JS, Hong C, Brieba LG, Rudiño-Piñera E, Blood PD, Sawyer JE, Johnson CD, Dindot SV, et al. Novel transcriptome assembly and improved annotation of the whiteleg shrimp (Litopenaeus vannamei), a dominant crustacean in global seafood mariculture. Scientific Reports. 4: 7081. PMID 25420880 DOI: 10.1038/Srep07081  0.367
2014 Cuesta I, González LM, Estrada K, Grande R, Zaballos A, Lobo CA, Barrera J, Sanchez-Flores A, Montero E. High-Quality Draft Genome Sequence of Babesia divergens, the Etiological Agent of Cattle and Human Babesiosis. Genome Announcements. 2. PMID 25395649 DOI: 10.1128/genomeA.01194-14  0.347
2014 Reid AJ, Blake DP, Ansari HR, Billington K, Browne HP, Bryant J, Dunn M, Hung SS, Kawahara F, Miranda-Saavedra D, Malas TB, Mourier T, Naghra H, Nair M, Otto TD, ... ... Sanchez-Flores A, et al. Genomic analysis of the causative agents of coccidiosis in domestic chickens. Genome Research. 24: 1676-85. PMID 25015382 DOI: 10.1101/Gr.168955.113  0.7
2014 Sotillo J, Sanchez-Flores A, Cantacessi C, Harcus Y, Pickering D, Bouchery T, Camberis M, Tang SC, Giacomin P, Mulvenna J, Mitreva M, Berriman M, LeGros G, Maizels RM, Loukas A. Secreted proteomes of different developmental stages of the gastrointestinal nematode Nippostrongylus brasiliensis. Molecular & Cellular Proteomics : McP. 13: 2736-51. PMID 24994561 DOI: 10.1074/Mcp.M114.038950  0.574
2014 Oliveira P, Lima FM, Cruz MC, Ferreira RC, Sanchez-Flores A, Cordero EM, Cortez DR, Ferreira ÉR, Briones MR, Mortara RA, da Silveira JF, Bahia D. Trypanosoma cruzi: Genome characterization of phosphatidylinositol kinase gene family (PIK and PIK-related) and identification of a novel PIK gene. Infection, Genetics and Evolution : Journal of Molecular Epidemiology and Evolutionary Genetics in Infectious Diseases. 25: 157-65. PMID 24727645 DOI: 10.1016/j.meegid.2014.03.022  0.372
2013 Tsai IJ, Zarowiecki M, Holroyd N, Garciarrubio A, Sanchez-Flores A, Brooks KL, Tracey A, Bobes RJ, Fragoso G, Sciutto E, Aslett M, Beasley H, Bennett HM, Cai J, Camicia F, et al. The genomes of four tapeworm species reveal adaptations to parasitism. Nature. 496: 57-63. PMID 23485966 DOI: 10.1038/Nature12031  0.524
2012 Alsford S, Eckert S, Baker N, Glover L, Sanchez-Flores A, Leung KF, Turner DJ, Field MC, Berriman M, Horn D. High-throughput decoding of antitrypanosomal drug efficacy and resistance. Nature. 482: 232-6. PMID 22278056 DOI: 10.1038/Nature10771  0.517
2011 Kikuchi T, Cotton JA, Dalzell JJ, Hasegawa K, Kanzaki N, McVeigh P, Takanashi T, Tsai IJ, Assefa SA, Cock PJ, Otto TD, Hunt M, Reid AJ, Sanchez-Flores A, Tsuchihara K, et al. Genomic insights into the origin of parasitism in the emerging plant pathogen Bursaphelenchus xylophilus. Plos Pathogens. 7: e1002219. PMID 21909270 DOI: 10.1371/Journal.Ppat.1002219  0.685
2011 Alsford S, Turner DJ, Obado SO, Sanchez-Flores A, Glover L, Berriman M, Hertz-Fowler C, Horn D. High-throughput phenotyping using parallel sequencing of RNA interference targets in the African trypanosome. Genome Research. 21: 915-24. PMID 21363968 DOI: 10.1101/Gr.115089.110  0.645
Low-probability matches (unlikely to be authored by this person)
2015 Dautt-Castro M, Ochoa-Leyva A, Contreras-Vergara CA, Pacheco-Sanchez MA, Casas-Flores S, Sanchez-Flores A, Kuhn DN, Islas-Osuna MA. Mango (Mangifera indica L.) cv. Kent fruit mesocarp de novo transcriptome assembly identifies gene families important for ripening. Frontiers in Plant Science. 6: 62. PMID 25741352 DOI: 10.3389/fpls.2015.00062  0.277
2020 Taboada B, Vazquez-Perez JA, Muñoz Medina JE, Ramos Cervantes P, Escalera-Zamudio M, Boukadida C, Sanchez-Flores A, Isa P, Mendieta Condado E, Martínez-Orozco JA, Becerril-Vargas E, Salas-Hernández J, Grande R, González-Torres C, Gaytán-Cervantes FJ, et al. Genomic Analysis of Early SARS-CoV-2 Variants Introduced in Mexico. Journal of Virology. PMID 32641486 DOI: 10.1128/JVI.01056-20  0.268
2015 Calva E, Silva C, Zaidi MB, Sanchez-Flores A, Estrada K, Silva GG, Soto-Jiménez LM, Wiesner M, Fernández-Mora M, Edwards RA, Vinuesa P. Complete Genome Sequencing of a Multidrug-Resistant and Human-Invasive Salmonella enterica Serovar Typhimurium Strain of the Emerging Sequence Type 213 Genotype. Genome Announcements. 3. PMID 26089426 DOI: 10.1128/Genomea.00663-15  0.263
2022 Boukadida C, Taboada B, Escalera-Zamudio M, Isa P, Ramírez-González JE, Vazquez-Perez JA, Muñoz-Medina JE, Grajales-Muñiz C, González-Torres C, Gaytán-Cervantes FJ, Rincón-Rubio A, Matías-Florentino M, Esteban Paz-Juárez H, Sanchez-Flores A, Mendieta-Condado E, et al. Genomic Characterization of SARS-CoV-2 Isolated from Patients with Distinct Disease Outcomes in Mexico. Microbiology Spectrum. e0124921. PMID 35019701 DOI: 10.1128/spectrum.01249-21  0.261
2022 Iša P, Taboada B, García-López R, Boukadida C, Ramírez-González JE, Vázquez-Pérez JA, Hernández-Terán A, Romero-Espinoza JÁ, Muñoz-Medina JE, Grajales-Muñiz C, Rincón-Rubio A, Matías-Florentino M, Sanchez-Flores A, Mendieta-Condado E, Barrera-Badillo G, et al. Metagenomic analysis reveals differences in the co-occurrence and abundance of viral species in SARS-CoV-2 patients with different severity of disease. Bmc Infectious Diseases. 22: 792. PMID 36261802 DOI: 10.1186/s12879-022-07783-8  0.242
2020 Hernández-Valle J, Sanchez-Flores A, Poggio S, Dreyfus G, Camarena L. The CtrA regulon of favors adaptation to a particular life style. Journal of Bacteriology. PMID 31932315 DOI: 10.1128/Jb.00678-19  0.242
2022 Taboada B, Zárate S, García-López R, Muñoz-Medina JE, Sanchez-Flores A, Herrera-Estrella A, Boukadida C, Gómez-Gil B, Selem Mojica N, Rosales-Rivera M, Salas-Lais AG, Gutiérrez-Ríos RM, Loza A, Rivera-Gutierrez X, Vazquez-Perez JA, et al. Dominance of Three Sublineages of the SARS-CoV-2 Delta Variant in Mexico. Viruses. 14. PMID 35746637 DOI: 10.3390/v14061165  0.241
2015 Vega-Alvarado L, Gómez-Angulo J, Escalante-García Z, Grande R, Gschaedler-Mathis A, Amaya-Delgado L, Sanchez-Flores A, Arrizon J. Correction for Vega-Alvarado et al., High-Quality Draft Genome Sequence of Candida apicola NRRL Y-50540. Genome Announcements. 3. PMID 26316641 DOI: 10.1128/Genomea.01043-15  0.213
2022 Sánchez-Correa MDS, Isidra-Arellano MC, Pozas-Rodríguez EA, Reyero-Saavedra MDR, Morales-Salazar A, Del Castillo SML, Sanchez-Flores A, Jiménez-Jacinto V, Reyes JL, Formey D, Valdés-López O. Argonaute5 and its associated small RNAs modulate the transcriptional response during the rhizobia- symbiosis. Frontiers in Plant Science. 13: 1034419. PMID 36466235 DOI: 10.3389/fpls.2022.1034419  0.208
2023 Castelán-Sánchez HG, Delaye L, Inward RPD, Dellicour S, Gutierrez B, Martinez de la Vina N, Boukadida C, Pybus OG, de Anda Jáuregui G, Guzmán P, Flores-Garrido M, Fontanelli Ó, Hernández Rosales M, Meneses A, Olmedo-Alvarez G, et al. Comparing the evolutionary dynamics of predominant SARS-CoV-2 virus lineages co-circulating in Mexico. Elife. 12. PMID 37498057 DOI: 10.7554/eLife.82069  0.195
2021 Escobar-Zepeda A, Rosas-Escobar P, Marquez Valdelamar L, de la Torre P, Partida-Martinez LP, Remegaldo R, Sanchez-Flores A, Vergara F. Distinctive prokaryotic microbiomes in sympatric plant roots from a Yucatan cenote. Bmc Research Notes. 14: 333. PMID 34493337 DOI: 10.1186/s13104-021-05746-x  0.172
2021 Rodríguez-Maldonado AP, Vázquez-Pérez JA, Cedro-Tanda A, Taboada B, Boukadida C, Wong-Arámbula C, Nuñez-García TE, Cruz-Ortiz N, Barrera-Badillo G, Hernández-Rivas L, López-Martínez I, Mendoza-Vargas A, Reyes-Grajeda JP, Alcaraz N, Peñaloza-Figueroa F, ... ... Sanchez-Flores A, et al. Emergence and spread of the potential variant of interest (VOI) B.1.1.519 of SARS-CoV-2 predominantly present in Mexico. Archives of Virology. PMID 34448936 DOI: 10.1007/s00705-021-05208-6  0.157
2021 Orta AH, Bush SJ, Gutiérrez-Mariscal M, Castro-Obregón S, Jaimes-Hoy L, Grande R, Vázquez G, Gorostieta-Salas E, Martínez-Pacheco M, Díaz-Barba K, Cornejo-Páramo P, Sanchez-Flores A, Székely T, Urrutia AO, Cortez D. Rats exhibit age-related mosaic loss of chromosome Y. Communications Biology. 4: 1418. PMID 34934158 DOI: 10.1038/s42003-021-02936-y  0.151
2017 Titulaer M, Melgoza-Castillo A, Panjabi AO, Sanchez-Flores A, Martínez-Guerrero JH, Macías-Duarte A, Fernandez JA. Molecular analysis of stomach contents reveals important grass seeds in the winter diet of Baird's and Grasshopper sparrows, two declining grassland bird species. Plos One. 12: e0189695. PMID 29261732 DOI: 10.1371/journal.pone.0189695  0.147
2022 Zárate S, Taboada B, Muñoz-Medina JE, Iša P, Sanchez-Flores A, Boukadida C, Herrera-Estrella A, Selem Mojica N, Rosales-Rivera M, Gómez-Gil B, Salas-Lais AG, Santacruz-Tinoco CE, Montoya-Fuentes H, Alvarado-Yaah JE, Molina-Salinas GM, et al. The Alpha Variant (B.1.1.7) of SARS-CoV-2 Failed to Become Dominant in Mexico. Microbiology Spectrum. 10: e0224021. PMID 35389245 DOI: 10.1128/spectrum.02240-21  0.138
2022 Murga-Garrido SM, Orbe-Orihuela YC, Díaz-Benítez CE, Castañeda-Márquez AC, Cornejo-Granados F, Ochoa-Leyva A, Sanchez-Flores A, Cruz M, Burguete-García AI, Lagunas-Martínez A. Alterations of the Gut Microbiome Associated to Methane Metabolism in Mexican Children with Obesity. Children (Basel, Switzerland). 9. PMID 35204867 DOI: 10.3390/children9020148  0.13
2023 Geiger O, Sanchez-Flores A, Padilla-Gomez J, Degli Esposti M. Multiple approaches of cellular metabolism define the bacterial ancestry of mitochondria. Science Advances. 9: eadh0066. PMID 37556552 DOI: 10.1126/sciadv.adh0066  0.12
2022 Perelman C, Fastlicht A, Sanchez-Flores A, Wegman-Ostrosky T. Superspreading event of Covid-19 in adolescents: is there a difference between the vaccinated and the unvaccinated? Salud Publica De Mexico. 64: 446-447. PMID 36130373 DOI: 10.21149/13456  0.12
2022 García-López R, Laresgoiti-Servitje E, Lemus-Martin R, Sanchez-Flores A, Sanders-Velez C. The New SARS-CoV-2 Variants and Their Epidemiological Impact in Mexico. Mbio. e0106021. PMID 35972143 DOI: 10.1128/mbio.01060-21  0.12
2022 Bobes RJ, Estrada K, Rios-Valencia DG, Calderón-Gallegos A, de la Torre P, Carrero JC, Sanchez-Flores A, Laclette JP. The Genomes of Two Strains of the Animal Model for the Study of Human Cysticercosis. Frontiers in Cellular and Infection Microbiology. 12: 876839. PMID 35619649 DOI: 10.3389/fcimb.2022.876839  0.12
2022 Vázquez-Chacón CA, de Jesús Rodríguez-Gaxiola F, Sánchez-Flores A, Montaño S, Bello-Rios C, Fonseca-Coronado S, López-Carrera CF, Martínez-Guarneros A, Parra-Unda R, García-Magallanes N, Arámbula-Meraz E, Escobar-Gutiérrez A, Cruz-Rivera M, López-Durán PA. Intra-host genetic population diversity: Role in emergence and persistence of drug resistance among Mycobacterium tuberculosis complex minor variants. Infection, Genetics and Evolution : Journal of Molecular Epidemiology and Evolutionary Genetics in Infectious Diseases. 101: 105288. PMID 35489699 DOI: 10.1016/j.meegid.2022.105288  0.12
2022 Rojas-Vargas J, González-Sánchez R, Sánchez-Flores A, Licea-Navarro AF, Pardo-López L. Complete Genome Sequence of Halopseudomonas aestusnigri Strain GOM5, Isolated from Asphalt Marine Sediments of the Gulf of Mexico. Microbiology Resource Announcements. e0122221. PMID 35262380 DOI: 10.1128/mra.01222-21  0.12
2022 Loza A, García-Guevara F, Segovia L, Escobar-Zepeda A, Sanchez-Olmos MDC, Merino E, Sanchez-Flores A, Pardo-Lopez L, Juarez K, Gutierrez-Rios RM. Definition of the Metagenomic Profile of Ocean Water Samples From the Gulf of Mexico Based on Comparison With Reference Samples From Sites Worldwide. Frontiers in Microbiology. 12: 781497. PMID 35178038 DOI: 10.3389/fmicb.2021.781497  0.12
2021 Barona-Gómez F, Delaye L, Díaz-Valenzuela E, Plisson F, Cruz-Pérez A, Díaz-Sánchez M, García-Sepúlveda CA, Sanchez-Flores A, Pérez-Abreu R, Valencia-Valdespino FJ, Vega-Magaña N, Muñoz-Valle JF, García-González OP, Bernal-Silva S, Comas-García A, et al. Phylogenomics and population genomics of SARS-CoV-2 in Mexico during the pre-vaccination stage reveals variants of interest B.1.1.28.4 and B.1.1.222 or B.1.1.519 and the nucleocapsid mutation S194L associated with symptoms. Microbial Genomics. 7. PMID 34846283 DOI: 10.1099/mgen.0.000684  0.12
2021 Gonzalez LM, Sevilla E, Fernández-García M, Sanchez-Flores A, Montero E. Integration of Genomic and Transcriptomic Data to Elucidate Molecular Processes in Babesia divergens. Methods in Molecular Biology (Clifton, N.J.). 2369: 199-215. PMID 34313991 DOI: 10.1007/978-1-0716-1681-9_12  0.12
2021 Sánchez-Reyes A, Bretón-Deval L, Mangelson H, Salinas-Peralta I, Sanchez-Flores A. Hi-C deconvolution of a textile dye-related microbiome reveals novel taxonomic landscapes and links phenotypic potential to individual genomes. International Microbiology : the Official Journal of the Spanish Society For Microbiology. 25: 99-110. PMID 34269948 DOI: 10.1007/s10123-021-00189-7  0.12
2021 Valencia-Morales MDP, Sanchez-Flores A, Colín-Castelán D, Alvarado-Caudillo Y, Fragoso-Bargas N, López-González G, Peña-López T, Ramírez-Nava M, de la Rocha C, Rodríguez-Ríos D, Lund G, Zaina S. Somatic Genetic Mosaicism in the Apolipoprotein E-null Mouse Aorta. Thrombosis and Haemostasis. 121: 1541-1553. PMID 33677828 DOI: 10.1055/a-1414-4840  0.12
2021 Fajardo-Rebollar E, Estrada K, Grande R, Ek Ramos MJ, Vargas GR, Villegas-Torres OG, Juárez AM, Sanchez-Flores A, Díaz-Camino C. Bacterial and Fungal Microbiome Profiling in Chilhuacle Negro Chili ( L.) Associated With Fruit Rot Disease. Plant Disease. 105: 2618-2627. PMID 33393360 DOI: 10.1094/PDIS-09-20-2098-RE  0.12
2020 Peralta-García I, González-Muñoz F, Elena RM, Sánchez-Flores A, López Munguía A. Evolution of Fructans in (Agave Sap) During the Plant Production Lifetime. Frontiers in Nutrition. 7: 566950. PMID 33163505 DOI: 10.3389/fnut.2020.566950  0.12
2020 Raggi L, García-Guevara F, Godoy-Lozano EE, Martínez-Santana A, Escobar-Zepeda A, Gutierrez-Rios RM, Loza A, Merino E, Sanchez-Flores A, Licea-Navarro A, Pardo-Lopez L, Segovia L, Juarez K. Metagenomic Profiling and Microbial Metabolic Potential of Perdido Fold Belt (NW) and Campeche Knolls (SE) in the Gulf of Mexico. Frontiers in Microbiology. 11: 1825. PMID 32903729 DOI: 10.3389/fmicb.2020.01825  0.12
2020 Chincoya DA, Sanchez-Flores A, Estrada K, Díaz-Velásquez CE, González-Rodríguez A, Vaca-Paniagua F, Dávila P, Arias S, Solórzano S. Identification of High Molecular Variation Loci in Complete Chloroplast Genomes of (Cactaceae, Caryophyllales). Genes. 11. PMID 32708269 DOI: 10.3390/genes11070830  0.12
2020 Sánchez-Reyes A, Bretón-Deval L, Mangelson H, Sanchez-Flores A. Draft genome sequence of "Candidatus Afipia apatlaquensis" sp. nov., IBT-C3, a potential strain for decolorization of textile dyes. Bmc Research Notes. 13: 265. PMID 32487246 DOI: 10.1186/s13104-020-05117-y  0.12
2020 Breton-Deval L, Sanchez-Reyes A, Sanchez-Flores A, Juárez K, Salinas-Peralta I, Mussali-Galante P. Functional Analysis of a Polluted River Microbiome Reveals a Metabolic Potential for Bioremediation. Microorganisms. 8. PMID 32290598 DOI: 10.3390/microorganisms8040554  0.12
2020 Escobar-Zepeda A, Godoy-Lozano EE, Raggi L, Segovia L, Merino E, Gutiérrez-Rios RM, Juarez K, Licea-Navarro AF, Pardo-Lopez L, Sanchez-Flores A. Author Correction: Analysis of sequencing strategies and tools for taxonomic annotation: Defining standards for progressive metagenomics. Scientific Reports. 10: 4259. PMID 32123270 DOI: 10.1038/s41598-020-61219-4  0.12
2019 Solórzano S, Chincoya DA, Sanchez-Flores A, Estrada K, Díaz-Velásquez CE, González-Rodríguez A, Vaca-Paniagua F, Dávila P, Arias S. De Novo Assembly Discovered Novel Structures in Genome of Plastids and Revealed Divergent Inverted Repeats in (Cactaceae, Caryophyllales). Plants (Basel, Switzerland). 8. PMID 31581555 DOI: 10.3390/plants8100392  0.12
2019 Breton-Deval L, Sanchez-Flores A, Juárez K, Vera-Estrella R. Integrative study of microbial community dynamics and water quality along The Apatlaco River. Environmental Pollution (Barking, Essex : 1987). 255: 113158. PMID 31521989 DOI: 10.1016/j.envpol.2019.113158  0.12
2019 González LM, Estrada K, Grande R, Jiménez-Jacinto V, Vega-Alvarado L, Sevilla E, Barrera J, Cuesta I, Zaballos Á, Bautista JM, Lobo CA, Sánchez-Flores A, Montero E. Comparative and functional genomics of the protozoan parasite Babesia divergens highlighting the invasion and egress processes. Plos Neglected Tropical Diseases. 13: e0007680. PMID 31425518 DOI: 10.1371/journal.pntd.0007680  0.12
2019 Jiménez-Jacinto V, Sanchez-Flores A, Vega-Alvarado L. Integrative Differential Expression Analysis for Multiple EXperiments (IDEAMEX): A Web Server Tool for Integrated RNA-Seq Data Analysis. Frontiers in Genetics. 10: 279. PMID 30984248 DOI: 10.3389/fgene.2019.00279  0.12
2018 García-López G, Ávila-González D, García-Castro IL, Flores-Herrera H, Molina-Hernández A, Portillo W, Díaz-Martínez NE, Sanchez-Flores A, Verleyen J, Merchant-Larios H, Díaz NF. Pluripotency markers in tissue and cultivated cells in vitro of different regions of human amniotic epithelium. Experimental Cell Research. 375: 31-41. PMID 30557557 DOI: 10.1016/j.yexcr.2018.12.007  0.12
2018 Muñoz-Medina JE, Garcia-Knight MA, Sanchez-Flores A, Monroy-Muñoz IE, Grande R, Esbjörnsson J, Santacruz-Tinoco CE, González-Bonilla CR. Evolutionary analysis of the Chikungunya virus epidemic in Mexico reveals intra-host mutational hotspots in the E1 protein. Plos One. 13: e0209292. PMID 30550577 DOI: 10.1371/journal.pone.0209292  0.12
2018 Godoy-Lozano EE, Escobar-Zepeda A, Raggi L, Merino E, Gutierrez-Rios RM, Juarez K, Segovia L, Licea-Navarro AF, Gracia A, Sanchez-Flores A, Pardo-Lopez L. Bacterial Diversity and the Geochemical Landscape in the Southwestern Gulf of Mexico. Frontiers in Microbiology. 9: 2528. PMID 30405581 DOI: 10.3389/fmicb.2018.02528  0.12
2018 García-Maldonado JQ, Escobar-Zepeda A, Raggi L, Bebout BM, Sanchez-Flores A, López-Cortés A. Bacterial and archaeal profiling of hypersaline microbial mats and endoevaporites, under natural conditions and methanogenic microcosm experiments. Extremophiles : Life Under Extreme Conditions. 22: 903-916. PMID 30120599 DOI: 10.1007/s00792-018-1047-2  0.12
2018 Escobar-Zepeda A, Godoy-Lozano EE, Raggi L, Segovia L, Merino E, Gutiérrez-Rios RM, Juarez K, Licea-Navarro AF, Pardo-Lopez L, Sanchez-Flores A. Analysis of sequencing strategies and tools for taxonomic annotation: Defining standards for progressive metagenomics. Scientific Reports. 8: 12034. PMID 30104688 DOI: 10.1038/s41598-018-30515-5  0.12
2018 Sánchez-Pozos K, Ortíz-López MG, Peña-Espinoza BI, de Los Ángeles Granados-Silvestre M, Jiménez-Jacinto V, Verleyen J, Tekola-Ayele F, Sanchez-Flores A, Menjivar M. Whole-exome sequencing in maya indigenous families: variant in PPP1R3A is associated with type 2 diabetes. Molecular Genetics and Genomics : Mgg. 293: 1205-1216. PMID 29948331 DOI: 10.1007/s00438-018-1453-2  0.12
2018 Olvera-García M, Sanchez-Flores A, Quirasco Baruch M. Genomic and functional characterisation of two Enterococcus strains isolated from Cotija cheese and their potential role in ripening. Applied Microbiology and Biotechnology. 102: 2251-2267. PMID 29372297 DOI: 10.1007/s00253-018-8765-3  0.12
2017 Carrillo-Tapia E, García-García E, Herrera-González NE, Yamazaki-Nakashimada MA, Staines-Boone AT, Segura-Mendez NH, Scheffler-Mendoza SC, O Farrill-Romanillos P, Gonzalez-Serrano ME, Rodriguez-Alba JC, Santos-Argumedo L, Berron-Ruiz L, Sanchez-Flores A, López-Herrera G. Delayed diagnosis in X-linked agammaglobulinemia and its relationship to the occurrence of mutations in BTK non-kinase domains. Expert Review of Clinical Immunology. 14: 83-93. PMID 29202590 DOI: 10.1080/1744666X.2018.1413349  0.12
2016 Vera-Ponce de León A, Sanchez-Flores A, Rosenblueth M, Martínez-Romero E. Fungal Community Associated with Dactylopius (Hemiptera: Coccoidea: Dactylopiidae) and Its Role in Uric Acid Metabolism. Frontiers in Microbiology. 7: 954. PMID 27446001 DOI: 10.3389/fmicb.2016.00954  0.12
2016 Escobar-Zepeda A, Sanchez-Flores A, Quirasco Baruch M. Metagenomic analysis of a Mexican ripened cheese reveals a unique complex microbiota. Food Microbiology. 57: 116-27. PMID 27052710 DOI: 10.1016/j.fm.2016.02.004  0.12
2016 Bedoya-López A, Estrada K, Sanchez-Flores A, Ramírez OT, Altamirano C, Segovia L, Miranda-Ríos J, Trujillo-Roldán MA, Valdez-Cruz NA. Effect of Temperature Downshift on the Transcriptomic Responses of Chinese Hamster Ovary Cells Using Recombinant Human Tissue Plasminogen Activator Production Culture. Plos One. 11: e0151529. PMID 26991106 DOI: 10.1371/journal.pone.0151529  0.12
2016 Rodriguez-Anaya LZ, Gonzalez-Galaviz JR, Casillas-Hernandez R, Lares-Villa F, Estrada K, Ibarra-Gamez JC, Sanchez-Flores A. Draft Genome Sequence of White Spot Syndrome Virus Isolated from Cultured Litopenaeus vannamei in Mexico. Genome Announcements. 4. PMID 26966222 DOI: 10.1128/genomeA.01674-15  0.12
2015 Escobar-Zepeda A, Vera-Ponce de León A, Sanchez-Flores A. The Road to Metagenomics: From Microbiology to DNA Sequencing Technologies and Bioinformatics. Frontiers in Genetics. 6: 348. PMID 26734060 DOI: 10.3389/fgene.2015.00348  0.12
2014 Soto-Jimenez LM, Estrada K, Sanchez-Flores A. GARM: genome assembly, reconciliation and merging pipeline. Current Topics in Medicinal Chemistry. 14: 418-24. PMID 24304318 DOI: 10.2174/1568026613666131204110628  0.12
2014 Sanchez-Flores A, Abreu-Goodger C. A practical guide to sequencing genomes and transcriptomes. Current Topics in Medicinal Chemistry. 14: 398-406. PMID 24304310 DOI: 10.2174/1568026613666131204142353  0.12
2012 Sanchez-Flores A. Sequencing parasite populations. Nature Reviews. Microbiology. 10: 85. PMID 22245933 DOI: 10.1038/nrmicro2738  0.12
2011 Sanchez-Flores A. A new piece of the eukaryotic puzzle. Nature Reviews. Microbiology. 9: 769. PMID 21997841 DOI: 10.1038/nrmicro2680  0.12
2011 Sanchez-Flores A. A 'clap' for in silico studies. Nature Reviews. Microbiology. 9: 7. PMID 21164533 DOI: 10.1038/nrmicro2496  0.12
2008 Sánchez-Flores A, Pérez-Rueda E, Segovia L. Protein homology detection and fold inference through multiple alignment entropy profiles. Proteins. 70: 248-56. PMID 17671981 DOI: 10.1002/prot.21506  0.12
2022 Orbe-Orihuela YC, Godoy-Lozano EE, Lagunas-Martínez A, Castañeda-Márquez AC, Murga-Garrido S, Díaz-Benítez CE, Ochoa-Leyva A, Cornejo-Granados F, Cruz M, Estrada K, Bermúdez-Morales VH, Sanchez-Flores A, Burguete-García AI. Association of Gut Microbiota with Dietary-dependent Childhood Obesity. Archives of Medical Research. PMID 35382951 DOI: 10.1016/j.arcmed.2022.03.007  0.081
2023 Zárate S, Taboada B, Rosales-Rivera M, García-López R, Muñoz-Medina JE, Sanchez-Flores A, Herrera-Estrella A, Gómez-Gil B, Selem Mojica N, Salas-Lais AG, Vazquez-Perez JA, Cabrera-Gaytán DA, Fernandes-Matano L, Uribe-Noguez LA, Chale-Dzul JB, et al. Omicron-BA.1 Dispersion Rates in Mexico Varied According to the Regional Epidemic Patterns and the Diversity of Local Delta Subvariants. Viruses. 15. PMID 36680283 DOI: 10.3390/v15010243  0.079
2015 Valencia-Morales Mdel P, Zaina S, Heyn H, Carmona FJ, Varol N, Sayols S, Condom E, Ramírez-Ruz J, Gomez A, Moran S, Lund G, Rodríguez-Ríos D, López-González G, Ramírez-Nava M, de la Rocha C, ... Sanchez-Flores A, et al. The DNA methylation drift of the atherosclerotic aorta increases with lesion progression. Bmc Medical Genomics. 8: 7. PMID 25881171 DOI: 10.1186/S12920-015-0085-1  0.054
2023 Loza A, Wong-Chew RM, Jiménez-Corona ME, Zárate S, López S, Ciria R, Palomares D, García-López R, Iša P, Taboada B, Rosales M, Boukadida C, Herrera-Estrella A, Mojica NS, Rivera-Gutierrez X, ... ... Sanchez-Flores A, et al. Two-year follow-up of the COVID-19 pandemic in Mexico. Frontiers in Public Health. 10: 1050673. PMID 36711379 DOI: 10.3389/fpubh.2022.1050673  0.034
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