Paul Gugger, Ph.D. - Publications

Affiliations: 
2015- Appalachian Lab University of Maryland, College Park, College Park, MD 
Area:
plant phylogeography and genomics

24 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2022 Sork VL, Cokus SJ, Fitz-Gibbon ST, Zimin AV, Puiu D, Garcia JA, Gugger PF, Henriquez CL, Zhen Y, Lohmueller KE, Pellegrini M, Salzberg SL. High-quality genome and methylomes illustrate features underlying evolutionary success of oaks. Nature Communications. 13: 2047. PMID 35440538 DOI: 10.1038/s41467-022-29584-y  0.353
2019 Hipp AL, Whittemore AT, Garner M, Hahn M, Fitzek E, Guichoux E, Cavender-Bares J, Gugger PF, Manos PS, Pearse IS, Cannon CH. Genomic Identity of White Oak Species in an Eastern North American Syngameon Annals of the Missouri Botanical Garden. 104: 455-477. DOI: 10.3417/2019434  0.476
2018 Martins K, Gugger PF, Llanderal-Mendoza J, González-Rodríguez A, Fitz-Gibbon ST, Zhao JL, Rodríguez-Correa H, Oyama K, Sork VL. Landscape genomics provides evidence of climate-associated genetic variation in Mexican populations of . Evolutionary Applications. 11: 1842-1858. PMID 30459833 DOI: 10.1111/eva.12684  0.386
2018 Oney-Birol S, Fitz-Gibbon S, Chen JM, Gugger PF, Sork VL. Assessment of shared alleles in drought-associated candidate genes among southern California white oak species (Quercus sect. Quercus). Bmc Genetics. 19: 88. PMID 30285631 DOI: 10.1186/S12863-018-0677-9  0.363
2018 Kim BY, Xinzeng W, Fitz-Gibbon S, Lohmueller KE, Ortego J, Gugger PF, Sork VL. RADseq data reveal ancient, but not pervasive, introgression between Californian tree and scrub oak species (Quercus sect. Quercus: Fagaceae). Molecular Ecology. PMID 30226013 DOI: 10.1111/Mec.14869  0.368
2018 Gugger PF, Liang CT, Sork VL, Hodgskiss P, Wright JW. Applying landscape genomic tools to forest management and restoration of Hawaiian koa (Acacia koa) in a changing environment. Evolutionary Applications. 11: 231-242. PMID 29387158 DOI: 10.1111/eva.12534  0.368
2018 Albarrán-Lara AL, Petit RJ, Kremer A, Caron H, Peñaloza-Ramírez JM, Gugger PF, Dávila-Aranda PD, Oyama K. Low genetic differentiation between two morphologically and ecologically distinct giant-leaved Mexican oaks Plant Systematics and Evolution. 305: 89-101. DOI: 10.1007/s00606-018-1554-8  0.312
2016 Ortego J, Gugger PF, Sork VL. Impacts of human-induced environmental disturbances on hybridization between two ecologically differentiated Californian oak species. The New Phytologist. PMID 27621132 DOI: 10.1111/nph.14182  0.32
2016 Sork VL, Gugger PF, Chen JM, Werth S. Evolutionary lessons from California plant phylogeography. Proceedings of the National Academy of Sciences of the United States of America. PMID 27432984 DOI: 10.1073/pnas.1602675113  0.351
2016 Gugger PF, Fitz-Gibbon S, Pellegrini M, Sork VL. Species-wide patterns of DNA methylation variation in Quercus lobata and its association with climate gradients. Molecular Ecology. PMID 26833902 DOI: 10.1111/Mec.13563  0.311
2016 Riordan EC, Gugger PF, Ortego J, Smith C, Gaddis K, Thompson P, Sork VL. Association of genetic and phenotypic variability with geography and climate in three southern California oaks. American Journal of Botany. PMID 26758886 DOI: 10.3732/Ajb.1500135  0.355
2016 Sork VL, Squire K, Gugger PF, Steele SE, Levy ED, Eckert AJ. Landscape genomic analysis of candidate genes for climate adaptation in a California endemic oak, Quercus lobata. American Journal of Botany. PMID 26744482 DOI: 10.3732/ajb.1500162  0.323
2016 Zhao JL, Gugger PF, Xia YM, Li QJ. Ecological divergence of two closely related Roscoea species associated with late Quaternary climate change Journal of Biogeography. 43: 1990-2001. DOI: 10.1111/jbi.12809  0.377
2015 Ortego J, Noguerales V, Gugger PF, Sork VL. Evolutionary and demographic history of the Californian scrub white oak species complex: An integrative approach. Molecular Ecology. PMID 26547661 DOI: 10.1111/mec.13457  0.375
2014 Gavin DG, Fitzpatrick MC, Gugger PF, Heath KD, Rodríguez-Sánchez F, Dobrowski SZ, Hampe A, Hu FS, Ashcroft MB, Bartlein PJ, Blois JL, Carstens BC, Davis EB, de Lafontaine G, Edwards ME, et al. Climate refugia: joint inference from fossil records, species distribution models and phylogeography. The New Phytologist. 204: 37-54. PMID 25039238 DOI: 10.1111/Nph.12929  0.34
2014 Ortego J, Gugger PF, Riordan EC, Sork VL. Influence of climatic niche suitability and geographical overlap on hybridization patterns among southern Californian oaks Journal of Biogeography. 41: 1895-1908. DOI: 10.1111/Jbi.12334  0.353
2013 Gugger PF, Ikegami M, Sork VL. Influence of late Quaternary climate change on present patterns of genetic variation in valley oak, Quercus lobata Née. Molecular Ecology. 22: 3598-612. PMID 23802553 DOI: 10.1111/mec.12317  0.363
2013 Gugger PF, Cavender-Bares J. Molecular and morphological support for a Florida origin of the Cuban oak Journal of Biogeography. 40: 632-645. DOI: 10.1111/j.1365-2699.2011.02610.x  0.422
2012 Ortego J, Riordan EC, Gugger PF, Sork VL. Influence of environmental heterogeneity on genetic diversity and structure in an endemic southern Californian oak. Molecular Ecology. 21: 3210-23. PMID 22548448 DOI: 10.1111/J.1365-294X.2012.05591.X  0.372
2012 Gugger P. Adaptive evolutionary response of California valley oak to Quaternary climate change: evidence from landscape genomics, phylogeography, and ecological niche models Quaternary International. 180. DOI: 10.1016/J.Quaint.2012.08.274  0.359
2011 Gugger PF, González-Rodríguez A, Rodríguez-Correa H, Sugita S, Cavender-Bares J. Southward Pleistocene migration of Douglas-fir into Mexico: phylogeography, ecological niche modeling, and conservation of 'rear edge' populations. The New Phytologist. 189: 1185-99. PMID 21118265 DOI: 10.1111/j.1469-8137.2010.03559.x  0.506
2010 Gugger PF, Sugita S, Cavender-Bares J. Phylogeography of Douglas-fir based on mitochondrial and chloroplast DNA sequences: testing hypotheses from the fossil record. Molecular Ecology. 19: 1877-97. PMID 20374486 DOI: 10.1111/j.1365-294X.2010.04622.x  0.49
2009 Arnold AE, Miadlikowska J, Higgins KL, Sarvate SD, Gugger P, Way A, Hofstetter V, Kauff F, Lutzoni F. A phylogenetic estimation of trophic transition networks for ascomycetous fungi: are lichens cradles of symbiotrophic fungal diversification? Systematic Biology. 58: 283-97. PMID 20525584 DOI: 10.1093/Sysbio/Syp001  0.374
2008 Gugger PF, McLachlan JS, Manos PS, Clark JS. Inferring long-distance dispersal and topographic barriers during post-glacial colonization from the genetic structure of red maple (Acer rubrum L.) in New England Journal of Biogeography. 35: 1665-1673. DOI: 10.1111/J.1365-2699.2008.01915.X  0.374
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