David Calkins - Related publications

Affiliations: 
Vanderbilt University, Nashville, TN 
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50 most relevant papers in past 60 days:
Year Citation  Score
2021 Calkins DJ. Adaptive responses to neurodegenerative stress in glaucoma. Progress in Retinal and Eye Research. 100953. PMID 33640464 DOI: 10.1016/j.preteyeres.2021.100953   
2021 Liu YF, Liang JJ, Ng TK, Hu Z, Xu C, Chen S, Chen SL, Xu Y, Zhuang X, Huang S, Zhang M, Pang CP, Cen LP. Cxcl5/Cxcr2 modulates inflammation-mediated neural repair after optic nerve injury. Experimental Neurology. 113711. PMID 33785307 DOI: 10.1016/j.expneurol.2021.113711   
2021 Johnson KO, Triplett JW. Wiring subcortical image-forming centers: Topography, laminar targeting, and map alignment. Current Topics in Developmental Biology. 142: 283-317. PMID 33706920 DOI: 10.1016/bs.ctdb.2020.10.004   
2021 Brodie-Kommit J, Clark BS, Shi Q, Shiau F, Kim DW, Langel J, Sheely C, Ruzycki PA, Fries M, Javed A, Cayouette M, Schmidt T, Badea T, Glaser T, Zhao H, et al. Atoh7-independent specification of retinal ganglion cell identity. Science Advances. 7. PMID 33712461 DOI: 10.1126/sciadv.abe4983   
2021 Behtaj S, Karamali F, Najafian S, Masaeli E, Esfahani MN, Rybachuk M. The Role of PGS/PCL Scaffolds in Promoting Differentiation of Human Embryonic Stem Cells into Retinal Ganglion Cells. Acta Biomaterialia. PMID 33771718 DOI: 10.1016/j.actbio.2021.03.036   
2021 Amirmokhtari N, Foresi BD, Dewan SS, Bouhenni RA, Smith MA. Absence of Cytochrome P450-1b1 Increases Susceptibility of Pressure-Induced Axonopathy in the Murine Retinal Projection. Frontiers in Cell and Developmental Biology. 9: 636321. PMID 33748124 DOI: 10.3389/fcell.2021.636321   
2021 You Y, Barnett MH, Yiannikas C, Parratt JDE, Matthews JG, Graham SL, Klistorner A. Interferon-β Is Less Effective Than Other Drugs in Controlling the Rate of Retinal Ganglion Cell Loss in MS. Neurology(R) Neuroimmunology & Neuroinflammation. 8. PMID 33597189 DOI: 10.1212/NXI.0000000000000971   
2021 Lyu J, Mu X. Genetic control of retinal ganglion cell genesis. Cellular and Molecular Life Sciences : Cmls. PMID 33782712 DOI: 10.1007/s00018-021-03814-w   
2021 Park SJ, Woon QTS, Er JC, Wong BH, Liu X, Kang NY, Barathi VA, Silver DL, Chang YT. Application of neuron-selective fluorescent probe, NeuA, to identify mouse retinal degeneration. Chembiochem : a European Journal of Chemical Biology. PMID 33617145 DOI: 10.1002/cbic.202100011   
2021 Aydın R, Barış M, Durmaz-Engin C, Al-Aswad LA, Blumberg DM, Cioffi GA, Liebmann JM, Tezel TH, Tezel G. Early localized alterations of the retinal inner plexiform layer in association with visual field worsening in glaucoma patients. Plos One. 16: e0247401. PMID 33630899 DOI: 10.1371/journal.pone.0247401   
2021 Wang J, Struebing FL, Geisert EE. Commonalities of optic nerve injury and glaucoma-induced neurodegeneration: Insights from transcriptome-wide studies. Experimental Eye Research. 108571. PMID 33844961 DOI: 10.1016/j.exer.2021.108571   
2021 Rojas P, Ramírez AI, Cadena M, Fernández-Albarral JA, Salobrar-García E, López-Cuenca I, Santos-García I, de Lago E, Urcelay-Segura JL, Ramírez JM, de Hoz R, Salazar JJ. Retinal Ganglion Cell Loss and Microglial Activation in a SOD1G93A Mouse Model of Amyotrophic Lateral Sclerosis. International Journal of Molecular Sciences. 22. PMID 33562231 DOI: 10.3390/ijms22041663   
2021 Xia F, Ha Y, Shi S, Li Y, Li S, Luisi J, Kayed R, Motamedi M, Liu H, Zhang W. Early alterations of neurovascular unit in the retina in mouse models of tauopathy. Acta Neuropathologica Communications. 9: 51. PMID 33762004 DOI: 10.1186/s40478-021-01149-y   
2021 Brandli A, Dudczig S, Currie PD, Jusuf PR. Photoreceptor ablation following ATP induced injury triggers Müller glia driven regeneration in zebrafish. Experimental Eye Research. 108569. PMID 33839111 DOI: 10.1016/j.exer.2021.108569   
2021 Jerotic S, Lalovic N, Pejovic S, Mihaljevic M, Pavlovic Z, Britvic D, Risimic D, Soldatovic I, Silverstein SM, Maric NP. Sex differences in macular thickness of the retina in patients with psychosis spectrum disorders. Progress in Neuro-Psychopharmacology & Biological Psychiatry. 110: 110280. PMID 33567332 DOI: 10.1016/j.pnpbp.2021.110280   
2021 Yang JM, Chung S, Yun K, Kim B, So S, Kang S, Kang E, Lee JY. Long-term effects of human induced pluripotent stem cell-derived retinal cell transplantation in Pde6b knockout rats. Experimental & Molecular Medicine. PMID 33828232 DOI: 10.1038/s12276-021-00588-w   
2021 Ross AG, McDougald DS, Khan RS, Duong TT, Dine KE, Aravand P, Bennett J, Chavali VRM, Shindler KS. Rescue of retinal ganglion cells in optic nerve injury using cell-selective AAV mediated delivery of SIRT1. Gene Therapy. PMID 33589779 DOI: 10.1038/s41434-021-00219-z   
2021 Guggiana Nilo DA, Riegler C, Hübener M, Engert F. Distributed chromatic processing at the interface between retina and brain in the larval zebrafish. Current Biology : Cb. PMID 33636122 DOI: 10.1016/j.cub.2021.01.088   
2021 Yao MD, Zhu Y, Zhang QY, Zhang HY, Li XM, Jiang Q, Yan B. CircRNA expression profile and functional analysis in retinal ischemia-reperfusion injury. Genomics. PMID 33771636 DOI: 10.1016/j.ygeno.2021.03.026   
2021 Alessio EJ, Zhang DQ. Immunostaining of Whole-Mount Retinas with the CLARITY Tissue Clearing Method. Journal of Visualized Experiments : Jove. PMID 33749674 DOI: 10.3791/62178   
2021 Konala VBR, Nandakumar S, Surendran H, Pal R. Derivation of Induced Pluripotent Stem Cell (iPSC) Lines from Patient-Specific Peripheral Blood Mononuclear Cells (PBMC) Using Episomal Vectors. Methods in Molecular Biology (Clifton, N.J.). PMID 33772463 DOI: 10.1007/7651_2021_385   
2021 Murenu E, Kostidis S, Lahiri S, Geserich AS, Imhof A, Giera M, Michalakis S. Metabolic Analysis of Vitreous/Lens and Retina in Wild Type and Retinal Degeneration Mice. International Journal of Molecular Sciences. 22. PMID 33652907 DOI: 10.3390/ijms22052345   
2021 Shen J, Wang Y, Yao K. Protection of retinal ganglion cells in glaucoma: Current status and future. Experimental Eye Research. 108506. PMID 33609512 DOI: 10.1016/j.exer.2021.108506   
2021 Wang AYM, Wong VHY, Lee PY, Bui BV, Dudczig S, Vessey KA, Fletcher EL. Retinal ganglion cell dysfunction in mice following acute intraocular pressure is exacerbated by P2X7 receptor knockout. Scientific Reports. 11: 4184. PMID 33603067 DOI: 10.1038/s41598-021-83669-0   
2021 Wang Z, McCracken S, Williams PR. Transpupillary Two-photon In vivo Imaging of the Mouse Retina. Journal of Visualized Experiments : Jove. PMID 33645555 DOI: 10.3791/61970   
2021 Lee CE, Jung Y, Song YK. 8-Channel Biphasic Current Stimulator Optimized for Retinal Prostheses. Journal of Nanoscience and Nanotechnology. 21: 4298-4302. PMID 33714317 DOI: 10.1166/jnn.2021.19405   
2021 Mathew B, Torres LA, Gamboa Acha L, Tran S, Liu A, Patel R, Chennakesavalu M, Aneesh A, Huang CC, Feinstein DL, Mehraeen S, Ravindran S, Roth S. Uptake and Distribution of Administered Bone Marrow Mesenchymal Stem Cell Extracellular Vesicles in Retina. Cells. 10. PMID 33806128 DOI: 10.3390/cells10040730   
2021 Singh R, Winkler P, Binette F, Petersen-Jones S, Nasonkin I. Comparison of developmental dynamics in human fetal retina and human pluripotent stem cell derived retinal tissue. Stem Cells and Development. PMID 33677999 DOI: 10.1089/scd.2020.0085   
2021 Fung AT, Galvin J, Tran T. Epiretinal membrane: A review. Clinical & Experimental Ophthalmology. PMID 33656784 DOI: 10.1111/ceo.13914   
2021 Mesentier-Louro LA, Rangel B, Stell L, Shariati MA, Dalal R, Nathan A, Yuan K, de Jesus Perez V, Liao YJ. Hypoxia-induced inflammation: Profiling the first 24-hour posthypoxic plasma and central nervous system changes. Plos One. 16: e0246681. PMID 33661927 DOI: 10.1371/journal.pone.0246681   
2021 Reinhard J, Wiemann S, Hildebrandt S, Faissner A. Extracellular Matrix Remodeling in the Retina and Optic Nerve of a Novel Glaucoma Mouse Model. Biology. 10. PMID 33668263 DOI: 10.3390/biology10030169   
2021 Leahy KE, Wright T, Grudzinska Pechhacker MK, Audo I, Tumber A, Tavares E, MacDonald H, Locke J, VandenHoven C, Zeitz C, Heon E, Buncic JR, Vincent A. Optic Atrophy and Inner Retinal Thinning in -related Congenital Stationary Night Blindness. Genes. 12. PMID 33668843 DOI: 10.3390/genes12030330   
2021 Yu JJ, Azzam DB, Chwa M, Schneider K, Cho JH, Hsiang C, Klassen H, Kenney MC, Yang J. Age-Related Macular Degeneration (AMD) Transmitochondrial Cybrids Protected from Cellular Damage and Death by Human Retinal Progenitor Cells (hRPCs). Stem Cells International. 2021: 6655372. PMID 33628267 DOI: 10.1155/2021/6655372   
2021 Yu G, Gao SQ, Dong Z, Sheng L, Sun D, Zhang N, Zhang J, Margeivicus S, Fu P, Golczak M, Maeda A, Palczewski K, Lu ZR. Peptide Derivatives of Retinylamine Prevent Retinal Degeneration with Minimal Side Effects on Vision in Mice. Bioconjugate Chemistry. PMID 33677964 DOI: 10.1021/acs.bioconjchem.1c00043   
2021 Gilhooley MJ, Hickey D, Lindner M, Palumaa T, Hughes S, Peirson SN, MacLaren RE, Hankins MW. ON-bipolar cell gene expression during retinal degeneration: Implications for optogenetic visual restoration. Experimental Eye Research. 108553. PMID 33811915 DOI: 10.1016/j.exer.2021.108553   
2021 Thomas MG, Maconachie GDE, Kuht HJ, Chan WM, Sheth V, Hisaund M, McLean RJ, Barry B, Al-Diri B, Proudlock FA, Tu Z, Engle EC, Gottlob I. Optic Nerve Head and Retinal Abnormalities Associated with Congenital Fibrosis of the Extraocular Muscles. International Journal of Molecular Sciences. 22. PMID 33806565 DOI: 10.3390/ijms22052575   
2021 Zhang R, Feng Y, Lu J, Ge Y, Li H. lncRNA Ttc3-209 Promotes the Apoptosis of Retinal Ganglion Cells in Retinal Ischemia Reperfusion Injury by Targeting the miR-484/Wnt8a Axis. Investigative Ophthalmology & Visual Science. 62: 13. PMID 33687475 DOI: 10.1167/iovs.62.3.13   
2021 Pan WW, Wubben TJ, Besirli CG. Photoreceptor metabolic reprogramming: current understanding and therapeutic implications. Communications Biology. 4: 245. PMID 33627778 DOI: 10.1038/s42003-021-01765-3   
2021 Rolev KD, Shu XS, Ying Y. Targeted pharmacotherapy against neurodegeneration and neuroinflammation in early diabetic retinopathy. Neuropharmacology. 108498. PMID 33582150 DOI: 10.1016/j.neuropharm.2021.108498   
2021 Meyer BI, Chen BS, Biousse V, Newman NJ. Homonymous thinning on macular optical coherence tomography indicating retrograde trans-synaptic degeneration from occipital infarctions. Taiwan Journal of Ophthalmology. 11: 89-92. PMID 33767961 DOI: 10.4103/tjo.tjo_74_20   
2021 Wu F, Bard JE, Kann J, Yergeau D, Sapkota D, Ge Y, Hu Z, Wang J, Liu T, Mu X. Single cell transcriptomics reveals lineage trajectory of retinal ganglion cells in wild-type and Atoh7-null retinas. Nature Communications. 12: 1465. PMID 33674582 DOI: 10.1038/s41467-021-21704-4   
2021 Johnson KP, Fitzpatrick MJ, Zhao L, Wang B, McCracken S, Williams PR, Kerschensteiner D. Cell-type-specific binocular vision guides predation in mice. Neuron. PMID 33784498 DOI: 10.1016/j.neuron.2021.03.010   
2021 Miller GD, Abu-Qamar O, Salim S. Evaluation of Retinal Nerve Fiber Layer, Ganglion Cell-Inner Plexiform Layer, and Optic Nerve Head in Glaucoma Suspects With Varying Myopia. Journal of Glaucoma. PMID 33731645 DOI: 10.1097/IJG.0000000000001834   
2021 Kurt MM, Akpolat C, Evliyaoglu F, Yilmaz M, Ordulu F. Evaluation of Retinal Neurodegeneration and Choroidal Thickness in Patients with Inactive Graves' Ophthalmopathy. Klinische Monatsblatter Fur Augenheilkunde. PMID 33733445 DOI: 10.1055/a-1275-0703   
2021 Liu Z, Saeedi O, Zhang F, Villanueva R, Asanad S, Agrawal A, Hammer DX. Quantification of Retinal Ganglion Cell Morphology in Human Glaucomatous Eyes. Investigative Ophthalmology & Visual Science. 62: 34. PMID 33760041 DOI: 10.1167/iovs.62.3.34   
2021 Jin J, Kandula V, Miller RE. Monitoring retinal pathology and cerebral injury in sickle cell disease using spectral-domain optical coherence tomography in pediatric patients. Pediatric Blood & Cancer. e29028. PMID 33788385 DOI: 10.1002/pbc.29028   
2021 Yamasaki S, Sugita S, Horiuchi M, Masuda T, Fujii S, Makabe K, Kawasaki A, Hayashi T, Kuwahara A, Kishino A, Kimura T, Takahashi M, Mandai M. Low Immunogenicity and Immunosuppressive Properties of Human ESC- and iPSC-Derived Retinas. Stem Cell Reports. PMID 33770500 DOI: 10.1016/j.stemcr.2021.02.021   
2021 Garcia-Herranz D, Rodrigo MJ, Subias M, Martinez-Rincon T, Mendez-Martinez S, Bravo-Osuna I, Bonet A, Ruberte J, Garcia-Feijoo J, Pablo L, Garcia-Martin E, Herrero-Vanrell R. Novel Use of PLGA Microspheres to Create an Animal Model of Glaucoma with Progressive Neuroretinal Degeneration. Pharmaceutics. 13. PMID 33567776 DOI: 10.3390/pharmaceutics13020237   
2021 Sawant A, Ebbinghaus BN, Bleckert A, Gamlin C, Yu WQ, Berson D, Rudolph U, Sinha R, Hoon M. Organization and emergence of a mixed GABA-glycine retinal circuit that provides inhibition to mouse ON-sustained alpha retinal ganglion cells. Cell Reports. 34: 108858. PMID 33730586 DOI: 10.1016/j.celrep.2021.108858   
2021 Murenu E, Pavlou M, Richter L, Rapti K, Just S, Cehajic-Kapetanovic J, Tafrishi N, Hayes A, Scholey R, Lucas R, Büning H, Grimm D, Michalakis S. A universal protocol for isolating retinal ON bipolar cells across species via fluorescence-activated cell sorting. Molecular Therapy. Methods & Clinical Development. 20: 587-600. PMID 33665228 DOI: 10.1016/j.omtm.2021.01.011