Benjamin J. Cole, Ph.D.
Affiliations: | Biology | University of California, San Diego, La Jolla, CA |
Area:
Circadian Rhythms, Systems BiologyGoogle:
"Benjamin Cole"Parents
Sign in to add mentor| Joanne Chory | grad student | 2011 | UCSD | |
| (Rapid and dynamic growth of Arabidopsis seedlings in response to changes in light quality: A live imaging study.) | ||||
| Steve A. Kay | post-doc | 2011 | UCSD | |
| (Rapid and dynamic growth of Arabidopsis seedlings in response to changes in light quality: A live imaging study.) | ||||
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Publications
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| Baker CR, Patel-Tupper D, Cole BJ, et al. (2023) Metabolomic, photoprotective, and photosynthetic acclimatory responses to post-flowering drought in sorghum. Plant Direct. 7: e545 |
| Martínez-Vasallo C, Cole B, Gallego-Bartolomé J, et al. (2023) Epidermal GIGANTEA adjusts the response to shade at dusk by directly impinging on PHYTOCHROME INTERACTING FACTOR 7 function. Biorxiv : the Preprint Server For Biology |
| Gao C, Courty PE, Varoquaux N, et al. (2022) Successional adaptive strategies revealed by correlating arbuscular mycorrhizal fungal abundance with host plant gene expression. Molecular Ecology |
| Jha SG, Borowsky AT, et al. (2021) Vision, challenges and opportunities for a Plant Cell Atlas. Elife. 10 |
| MacKinnon KJ, Cole BJ, Yu C, et al. (2020) Changes in ambient temperature are the prevailing cue in determining Brachypodium distachyon diurnal gene regulation. The New Phytologist |
| Varoquaux N, Cole B, Gao C, et al. (2019) Transcriptomic analysis of field-droughted sorghum from seedling to maturity reveals biotic and metabolic responses. Proceedings of the National Academy of Sciences of the United States of America |
| Shulse CN, Cole BJ, Ciobanu D, et al. (2019) High-Throughput Single-Cell Transcriptome Profiling of Plant Cell Types. Cell Reports. 27: 2241-2247.e4 |
| Sasse J, Kant J, Cole BJ, et al. (2018) Multi-lab EcoFAB study shows highly reproducible physiology and depletion of soil metabolites by a model grass. The New Phytologist |
| Cole BJ, Feltcher ME, Waters RJ, et al. (2017) Genome-wide identification of bacterial plant colonization genes. Plos Biology. 15: e2002860 |
| Pedmale UV, Huang SC, Zander M, et al. (2015) Cryptochromes Interact Directly with PIFs to Control Plant Growth in Limiting Blue Light. Cell |