Gary Karpen
Affiliations: | University of California, Berkeley, Berkeley, CA, United States |
Area:
Drosophila genetics, chromosome organizationGoogle:
"Gary Karpen"Mean distance: 17.13 (cluster 11) | S | N | B | C | P |
Cross-listing: FlyTree
Parents
Sign in to add mentor| Gerold Schubiger | research assistant | 1978-1981 | (FlyTree) |
| Charles D. Laird | grad student | (FlyTree) | |
| Allan Spradling | post-doc | (FlyTree) |
Children
Sign in to add trainee| Tanya L. Daigle | research assistant | Salk | |
| Terence Murphy | grad student | (FlyTree) | |
| Robin Truelove | grad student | (FlyTree) | |
| Amy Rose Strom | grad student | 2013- | UC Berkeley (FlyTree) |
| Katy M. Donaldson | grad student | 2000 | UCSD (FlyTree) |
| Keith A. Maggert | grad student | 2000 | UCSD (FlyTree) |
| Kumar L. Hari | grad student | 2001 | UCSD (FlyTree) |
| Michael D. Blower | grad student | 2002 | UCSD (Cell Biology Tree) |
| Jamy C. Peng | grad student | 2007 | UC Berkeley |
| Sasha A. Langley | grad student | 2010 | UC Berkeley |
| Kevin Cook | post-doc | (FlyTree) | |
| Kenneth Dobie | post-doc | (FlyTree) | |
| Sylvia Erhardt | post-doc | (FlyTree) | |
| Kristen Johansen | post-doc | (FlyTree) | |
| Srivarsha Rajshekar | post-doc | UC Berkeley | |
| Beth Sullivan | post-doc | (FlyTree) | |
| Xiaoping Sun | post-doc | (FlyTree) | |
| Alexander Y. Konev | post-doc | 2000-2004 | Salk Institute (FlyTree) |
| Barbara G. Mellone | post-doc | 2003-2008 | UC Berkeley (FlyTree) |
| Weiguo Zhang | post-doc | 2005-2011 | UC Berkeley (FlyTree) |
| Aniek Janssen | post-doc | 2013-2018 | UC Berkeley (Cell Biology Tree) |
Collaborators
Sign in to add collaborator| Barbara Wakimoto | collaborator | (FlyTree) | |
| Dmitry V. Fyodorov | collaborator | 2001-2004 | Salk Institute (FlyTree) |
BETA: Related publications
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Publications
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| Rajshekar S, Adame-Arana O, Bajpai G, et al. (2023) Affinity hierarchies and amphiphilic proteins underlie the co-assembly of nucleolar and heterochromatin condensates. Research Square |
| Rajshekar S, Adame-Arana O, Bajpai G, et al. (2023) Affinity hierarchies and amphiphilic proteins underlie the co-assembly of nucleolar and heterochromatin condensates. Biorxiv : the Preprint Server For Biology |
| Tortora MMC, Brennan LD, Karpen G, et al. (2023) HP1-driven phase separation recapitulates the thermodynamics and kinetics of heterochromatin condensate formation. Proceedings of the National Academy of Sciences of the United States of America. 120: e2211855120 |
| Cekanaviciute E, Tran D, Nguyen H, et al. (2022) Mouse genomic associations with in vitro sensitivity to simulated space radiation. Life Sciences in Space Research. 36: 47-58 |
| Altemose N, Logsdon GA, Bzikadze AV, et al. (2022) Complete genomic and epigenetic maps of human centromeres. Science (New York, N.Y.). 376: eabl4178 |
| Lee YCG, Ogiyama Y, Martins NMC, et al. (2020) Pericentromeric heterochromatin is hierarchically organized and spatially contacts H3K9me2 islands in euchromatin. Plos Genetics. 16: e1008673 |
| Deviri D, Strom AR, Karpen G, et al. (2020) Multivalency of Proteins and their Interactions Predict their Phase Separation Biophysical Journal. 118: 58a |
| Langley SA, Miga KH, Karpen GH, et al. (2019) Haplotypes spanning centromeric regions reveal persistence of large blocks of archaic DNA. Elife. 8 |
| Langley SA, Miga KH, Karpen GH, et al. (2019) Author response: Haplotypes spanning centromeric regions reveal persistence of large blocks of archaic DNA Elife |
| Deviri D, Strom AR, Colmenares S, et al. (2019) Phase-Separation Driven Heterochromatin Formation: Experiment and Theory Biophysical Journal. 116: 70a |