Gary Karpen

Affiliations: 
University of California, Berkeley, Berkeley, CA 
Area:
Drosophila genetics, chromosome organization
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"Gary Karpen"
Mean distance: 17.13 (cluster 11)
 
SNBCP
Cross-listing: FlyTree

Parents

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Gerold Schubiger research assistant 1978-1981 (FlyTree)
Charles D. Laird grad student (FlyTree)
Allan Spradling post-doc (FlyTree)

Children

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Tanya L. Daigle research assistant Salk
Terence Murphy grad student (FlyTree)
Robin Truelove grad student (FlyTree)
Amy Rose Strom grad student 2013- UC Berkeley (FlyTree)
Katy M. Donaldson grad student 2000 UCSD (FlyTree)
Keith A. Maggert grad student 2000 UCSD (FlyTree)
Kumar L. Hari grad student 2001 UCSD (FlyTree)
Michael D. Blower grad student 2002 UCSD (Cell Biology Tree)
Jamy C. Peng grad student 2007 UC Berkeley
Sasha A. Langley grad student 2010 UC Berkeley
Kevin Cook post-doc (FlyTree)
Kenneth Dobie post-doc (FlyTree)
Sylvia Erhardt post-doc (FlyTree)
Kristen Johansen post-doc (FlyTree)
Srivarsha Rajshekar post-doc UC Berkeley
Beth Sullivan post-doc (FlyTree)
Xiaoping Sun post-doc (FlyTree)
Aniek Janssen post-doc 2013- UC Berkeley (Cell Biology Tree)
Alexander Y. Konev post-doc 2000-2004 Salk Institute (FlyTree)
Barbara G. Mellone post-doc 2003-2008 UC Berkeley (FlyTree)
Weiguo Zhang post-doc 2005-2011 UC Berkeley (FlyTree)

Collaborators

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Barbara Wakimoto collaborator (FlyTree)
Dmitry V. Fyodorov collaborator 2001-2004 Salk Institute (FlyTree)
BETA: Related publications

Publications

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Langley SA, Miga KH, Karpen GH, et al. (2019) Haplotypes spanning centromeric regions reveal persistence of large blocks of archaic DNA. Elife. 8
Janssen A, Colmenares SU, Lee T, et al. (2018) Timely double-strand break repair and pathway choice in pericentromeric heterochromatin depend on the histone demethylase dKDM4A. Genes & Development
Janssen A, Colmenares SU, Karpen GH. (2018) Heterochromatin: Guardian of the Genome. Annual Review of Cell and Developmental Biology
Zhang W, Karpen GH, Zhang Q. (2017) Exploring the Role of CENP-A Ser18 Phosphorylation in CIN and Tumorigenesis. Cell Cycle (Georgetown, Tex.). 0
Takada M, Zhang W, Suzuki A, et al. (2017) FBW7 loss promotes chromosomal instability and tumorigenesis via Cyclin E1/CDK2-mediated phosphorylation of CENP-A. Cancer Research
Colmenares SU, Swenson JM, Langley SA, et al. (2017) Drosophila Histone Demethylase KDM4A Has Enzymatic and Non-enzymatic Roles in Controlling Heterochromatin Integrity. Developmental Cell. 42: 156-169.e5
Strom AR, Emelyanov AV, Mir M, et al. (2017) Phase separation drives heterochromatin domain formation. Nature
Snijders AM, Langley SA, Kim YM, et al. (2016) Influence of early life exposure, host genetics and diet on the mouse gut microbiome and metabolome. Nature Microbiology. 2: 16221
Zhang W, Mao JH, Zhu W, et al. (2016) Centromere and kinetochore gene misexpression predicts cancer patient survival and response to radiotherapy and chemotherapy. Nature Communications. 7: 12619
Swenson JM, Colmenares SU, Strom AR, et al. (2016) The composition and organization of Drosophila heterochromatin are heterogeneous and dynamic. Elife. 5
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