Xiaoyu Chen, Ph.D.

modeling biological processes at the molecular level

William Stafford Noble	grad student	2011	University of Washington
(Computational Methods for Detecting Protein-binding Footprints and Assessing Multiple Genome Sequence Alignments.)

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Chen X, Hoffman MM, Bilmes JA, et al. (2010) A dynamic Bayesian network for identifying protein-binding footprints from single molecule-based sequencing data. Bioinformatics (Oxford, England). 26: i334-42
Badis G, Berger MF, Philippakis AA, et al. (2009) Diversity and complexity in DNA recognition by transcription factors. Science (New York, N.Y.). 324: 1720-3
Hesselberth JR, Chen X, Zhang Z, et al. (2009) Global mapping of protein-DNA interactions in vivo by digital genomic footprinting. Nature Methods. 6: 283-9