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Joseph Felsenstein, Ph.D.

Affiliations:

Genome Sciences, Biology

University of Washington, Seattle, Seattle, WA

Area:

phylogeny, coalescents

Website:

http://evolution.gs.washington.edu/felsenstein.html

Google:

"Joseph Felsenstein"

Cross-listing: Evolution Tree

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Parents

Richard C. Lewontin	grad student
Alan Robertson	post-doc	1967-1968

Children

Gary A. Churchill	grad student		University of Washington (GenetiTree)
Fred W. Allendorf	grad student	1975	University of Washington (Evolution Tree)
Michael Turelli	grad student	1973-1977	University of Washington
Shozo Yokoyama	grad student	1973-1977	University of Washington (Evolution Tree)
Mark Kirkpatrick	grad student	1983	(Evolution Tree)
Bruce Walsh	grad student	1978-1983	University of Washington (Evolution Tree)
Jeffrey L. Thorne	grad student	1986-1991	University of Washington (Evolution Tree)
Lindsey Dubb	grad student	1996-2005	University of Washington (Evolution Tree)
Chul Joo Kang	grad student	2001-2008	University of Washington (Evolution Tree)
Lucian Smith	post-doc		University of Washington (Evolution Tree)
Ruth Shaw	post-doc	1984-1987	University of Washington
Mary K. Kuhner	post-doc	1991-1993	University of Washington (Evolution Tree)
Emília P. Martins	post-doc	1992-1994	University of Washington (Neurotree)
Peter Beerli	post-doc	1994-1996	University of Washington (Evolution Tree)
Nicolas Salamin	post-doc	2003-2004	University of Washington (Evolution Tree)

Collaborators

BETA: Related publications

Publications

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Leaché AD, Banbury BL, Felsenstein J, et al. (2015) Short Tree, Long Tree, Right Tree, Wrong Tree: New Acquisition Bias Corrections for Inferring SNP Phylogenies. Systematic Biology. 64: 1032-47
Felsenstein J. (2014) Covariation of gene frequencies in a stepping-stone lattice of populations. Theoretical Population Biology. 100: 88-97
Bryant D, Bouckaert R, Felsenstein J, et al. (2012) Inferring species trees directly from biallelic genetic markers: bypassing gene trees in a full coalescent analysis. Molecular Biology and Evolution. 29: 1917-32
Felsenstein J. (2012) A comparative method for both discrete and continuous characters using the threshold model. The American Naturalist. 179: 145-56
Stone GN, Nee S, Felsenstein J. (2011) Controlling for non-independence in comparative analysis of patterns across populations within species. Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences. 366: 1410-24
Emery LS, Felsenstein J, Akey JM. (2010) Estimators of the human effective sex ratio detect sex biases on different timescales. American Journal of Human Genetics. 87: 848-56
RoyChoudhury A, Felsenstein J, Thompson EA. (2008) A two-stage pruning algorithm for likelihood computation for a population tree. Genetics. 180: 1095-105
Felsenstein J. (2008) Comparative methods with sampling error and within-species variation: contrasts revisited and revised. The American Naturalist. 171: 713-25
O'Meara B, Alfaro M, Bell C, et al. (2008) Comparative methods in R hackathon Nature Precedings
Felsenstein J. (2006) Accuracy of coalescent likelihood estimates: do we need more sites, more sequences, or more loci? Molecular Biology and Evolution. 23: 691-700

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