Alexander Hoffmann
Affiliations: | Chemistry and Biochemistry | University of California, San Diego, La Jolla, CA |
Area:
signaling, transcription, computational network; stress and immune responses, apoptosis, proliferationWebsite:
http://www-chem.ucsd.edu/faculty/profiles/hoffmann_alexander.htmlGoogle:
"Alexander Hoffmann"Mean distance: 8.84 | S | N | B | C | P |
Parents
Sign in to add mentorRobert G. Roeder | grad student | Rockefeller | |
David Baltimore | post-doc | Caltech |
Children
Sign in to add traineeChristine S. Huang | research assistant | 2004-2006 | UCSD |
Derren Barken | grad student | 2007 | UCSD |
Jeffrey D. Kearns | grad student | 2009 | UCSD |
Shannon L. Werner | grad student | 2009 | UCSD |
Thomas Conrad | grad student | 2010 | UCSD (Computational Biology Tree) |
Ellen L. Odea | grad student | 2010 | UCSD |
Christine S. Cheng | grad student | 2011 | UCSD |
Feng-Sheng Shih | grad student | 2011 | UCSD |
Andrew B. Caldwell | grad student | 2014 | UCSD |
Karen T. Fortmann | grad student | 2014 | UCSD |
Maxim N. Shokhirev | grad student | 2014 | UCSD |
Rachel W. Tsui | grad student | 2014 | UCSD |
Brooks E. Taylor | grad student | 2015 | UCSD |
Simon Mitchell | post-doc |
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Publications
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Luecke S, Adelaja A, Guo X, et al. (2023) Tonic TNF conditioning of macrophages safeguards stimulus-specific inflammatory responses. Embo Reports. e55986 |
Mitchell S, Tsui R, Tan ZC, et al. (2023) The NF-κB multidimer system model: A knowledge base to explore diverse biological contexts. Science Signaling. 16: eabo2838 |
Ando M, Magi S, Seki M, et al. (2021) IκBα is required for full transcriptional induction of some NFκB-regulated genes in response to TNF in MCF-7 cells. Npj Systems Biology and Applications. 7: 42 |
Son M, Wang AG, Tu HL, et al. (2021) NF-κB responds to absolute differences in cytokine concentrations. Science Signaling. 14 |
Cheng QJ, Ohta S, Sheu KM, et al. (2021) NF-κB dynamics determine the stimulus specificity of epigenomic reprogramming in macrophages. Science (New York, N.Y.). 372: 1349-1353 |
Adelaja A, Taylor B, Sheu KM, et al. (2021) Six distinct NFκB signaling codons convey discrete information to distinguish stimuli and enable appropriate macrophage responses. Immunity. 54: 916-930.e7 |
Oliver Metzig M, Tang Y, Mitchell S, et al. (2020) An incoherent feedforward loop interprets NFκB/RelA dynamics to determine TNF-induced necroptosis decisions. Molecular Systems Biology. 16: e9677 |
Lisiero DN, Cheng Z, Tejera MM, et al. (2020) IκBα Nuclear Export Enables 4-1BB-Induced cRel Activation and IL-2 Production to Promote CD8 T Cell Immunity. Journal of Immunology (Baltimore, Md. : 1950) |
Ngo KA, Kishimoto K, Davis-Turak J, et al. (2020) Dissecting the Regulatory Strategies of NF-κB RelA Target Genes in the Inflammatory Response Reveals Differential Transactivation Logics. Cell Reports. 30: 2758-2775.e6 |
Sen S, Cheng Z, Sheu KM, et al. (2020) Gene Regulatory Strategies that Decode the Duration of NFκB Dynamics Contribute to LPS- versus TNF-Specific Gene Expression. Cell Systems |