Fiona S. L. Brinkman

Affiliations: 
Molecular Biology and Biochemistry Simon Fraser University, Burnaby, British Columbia, Canada 
Area:
Bioinformatics Biology, Genetics, Evolution and Development Biology
Website:
https://www.sfu.ca/mbb/people/research-faculty/brinkman/
Google:
"Fiona Brinkman"
Bio:

http://hdl.handle.net/10393/10237

Parents

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Jo-Anne R. Dillon grad student 1996 University of Ottawa (Chemistry Tree)
 (Carbamoylphosphate synthetase (CPS) genes of Neisseria gonorrhoeae and other Neisseria species: Novel gene organisation, variable intergenic sequences, characterisation of naturally occurring mutants, and evolution of CPS genes)

Children

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Morgan Langille grad student (Neurotree)
Nancy Y. Yu grad student 2011 Simon Fraser
Matthew D. Whiteside grad student 2013 Simon Fraser
BETA: Related publications

Publications

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Petkau A, Mabon P, Sieffert C, et al. (2017) SNVPhyl: a single nucleotide variant phylogenomics pipeline for microbial genomic epidemiology. Microbial Genomics. 3: e000116
Bertelli C, Laird MR, Williams KP, et al. (2017) IslandViewer 4: expanded prediction of genomic islands for larger-scale datasets. Nucleic Acids Research
Hingston P, Chen J, Dhillon BK, et al. (2017) Genotypes Associated with Listeria monocytogenes Isolates Displaying Impaired or Enhanced Tolerances to Cold, Salt, Acid, or Desiccation Stress. Frontiers in Microbiology. 8: 369
Lambert D, Pightling A, Griffiths E, et al. (2017) Baseline Practices for the Application of Genomic Data Supporting Regulatory Food Safety. Journal of Aoac International
Jia B, Raphenya AR, Alcock B, et al. (2016) CARD 2017: expansion and model-centric curation of the comprehensive antibiotic resistance database. Nucleic Acids Research
Uyaguari-Diaz MI, Chan M, Chaban BL, et al. (2016) A comprehensive method for amplicon-based and metagenomic characterization of viruses, bacteria, and eukaryotes in freshwater samples. Microbiome. 4: 20
Miller RR, Langille MG, Montoya V, et al. (2016) Genomic Analysis of a Serotype 5 Streptococcus pneumoniae Outbreak in British Columbia, Canada, 2005-2009. The Canadian Journal of Infectious Diseases & Medical Microbiology = Journal Canadien Des Maladies Infectieuses Et De La Microbiologie MéDicale. 2016: 5381871
Winsor GL, Griffiths EJ, Lo R, et al. (2016) Enhanced annotations and features for comparing thousands of Pseudomonas genomes in the Pseudomonas genome database. Nucleic Acids Research. 44: D646-53
Petkau A, Bristow F, Matthews T, et al. (2016) Outbreak surveillance and investigation using IRIDA and SNVPhyl F1000research. 5
Van Rossum T, Peabody MA, Uyaguari-Diaz MI, et al. (2015) Year-Long Metagenomic Study of River Microbiomes Across Land Use and Water Quality. Frontiers in Microbiology. 6: 1405
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