Cole Trapnell
Affiliations: | 2010 | Computer Science | University of Maryland, College Park, College Park, MD |
Google:
"Cole Trapnell"Mean distance: (not calculated yet)
Parents
Sign in to add mentorSteven Salzberg | grad student | 2010 | University of Maryland |
John Rinn | post-doc | Harvard University and Broad Institute (Computational Biology Tree) |
BETA: Related publications
See more...
Publications
You can help our author matching system! If you notice any publications incorrectly attributed to this author, please sign in and mark matches as correct or incorrect. |
Martin BK, Qiu C, Nichols E, et al. (2022) Optimized single-nucleus transcriptional profiling by combinatorial indexing. Nature Protocols |
Kim HJ, Booth G, Saunders L, et al. (2022) Nuclear oligo hashing improves differential analysis of single-cell RNA-seq. Nature Communications. 13: 2666 |
Bonora G, Ramani V, Singh R, et al. (2021) Single-cell landscape of nuclear configuration and gene expression during stem cell differentiation and X inactivation. Genome Biology. 22: 279 |
Hasle N, Cooke A, Srivatsan S, et al. (2020) High-throughput, microscope-based sorting to dissect cellular heterogeneity. Molecular Systems Biology. 16: e9442 |
Gabrovsek L, Collins KB, Aggarwal S, et al. (2020) A-kinase-anchoring protein 1 (dAKAP1)-based signaling complexes coordinate local protein synthesis at the mitochondrial surface. The Journal of Biological Chemistry |
McFaline-Figueroa JL, Trapnell C, Cuperus JT. (2020) The promise of single-cell genomics in plants. Current Opinion in Plant Biology. 54: 114-121 |
Cao J, Zhou W, Steemers F, et al. (2020) Sci-fate characterizes the dynamics of gene expression in single cells. Nature Biotechnology |
Dorrity MW, Saunders LM, Queitsch C, et al. (2020) Dimensionality reduction by UMAP to visualize physical and genetic interactions. Nature Communications. 11: 1537 |
Qiu X, Rahimzamani A, Wang L, et al. (2020) Inferring Causal Gene Regulatory Networks from Coupled Single-Cell Expression Dynamics Using Scribe. Cell Systems |
Sridhar A, Hoshino A, Finkbeiner CR, et al. (2020) Single-Cell Transcriptomic Comparison of Human Fetal Retina, hPSC-Derived Retinal Organoids, and Long-Term Retinal Cultures. Cell Reports. 30: 1644-1659.e4 |