Yana Safonova, Ph.D.
Affiliations: | Johns Hopkins University, Baltimore, MD |
Area:
bioinformaticsGoogle:
"Yana Safonova"Mean distance: (not calculated yet)
Parents
Sign in to add mentor| Pavel A. Pevzner | grad student | UCSD | |
| Corey T. Watson | post-doc | University of Louisville School of Medicine (Evolution Tree) |
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Publications
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| Watson CT, Rodriguez OL, Engelbrecht E, et al. (2023) Looking to the future of antibody genetics: resolving the roles of immunoglobulin diversity in gene regulation, function, and immunity. Genes and Immunity |
| Rodriguez OL, Safonova Y, Silver CA, et al. (2023) Genetic variation in the immunoglobulin heavy chain locus shapes the human antibody repertoire. Nature Communications. 14: 4419 |
| Zhou P, Song G, Liu H, et al. (2023) Broadly neutralizing anti-S2 antibodies protect against all three human betacoronaviruses that cause deadly disease. Immunity |
| He WT, Yuan M, Callaghan S, et al. (2022) Broadly neutralizing antibodies to SARS-related viruses can be readily induced in rhesus macaques. Science Translational Medicine. 14: eabl9605 |
| Sirupurapu V, Safonova Y, Pevzner PA. (2022) Gene prediction in the immunoglobulin loci. Genome Research. 32: 1152-1169 |
| Safonova Y, Shin SB, Kramer L, et al. (2022) Variations in antibody repertoires correlate with vaccine responses. Genome Research |
| Lee JH, Toy L, Kos JT, et al. (2021) Vaccine genetics of IGHV1-2 VRC01-class broadly neutralizing antibody precursor naïve human B cells. Npj Vaccines. 6: 113 |
| Bhardwaj V, Pevzner PA, Rashtchian C, et al. (2021) Trace Reconstruction Problems in Computational Biology. Ieee Transactions On Information Theory. 67: 3295-3314 |
| Peng K, Safonova Y, Shugay M, et al. (2021) Diversity in immunogenomics: the value and the challenge. Nature Methods |
| Safonova Y, Pevzner PA. (2020) V(DD)J recombination is an important and evolutionary conserved mechanism for generating antibodies with unusually long CDR3s. Genome Research |