Kevin John McConnell - Publications

Affiliations: 
2002 Wesleyan University, Middletown, CT, United States 

13 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2010 BEVERIDGE DL, MCCONNELL KJ, NIRMALA R, YOUNG MA. ChemInform Abstract: Molecular Dynamics Simulation of DNA and Protein-DNA Complexes Including Solvent. Recent Progress. Cheminform. 26: no-no. DOI: 10.1002/chin.199509325  0.621
2003 Arthanari H, McConnell KJ, Beger R, Young MA, Beveridge DL, Bolton PH. Assessment of the molecular dynamics structure of DNA in solution based on calculated and observed NMR NOESY volumes and dihedral angles from scalar coupling constants. Biopolymers. 68: 3-15. PMID 12579576 DOI: 10.1002/Bip.10263  0.593
2002 Jayaram B, McConnell K, Dixit SB, Das A, Beveridge DL. Free-energy component analysis of 40 protein-DNA complexes: a consensus view on the thermodynamics of binding at the molecular level. Journal of Computational Chemistry. 23: 1-14. PMID 11913374 DOI: 10.1002/Jcc.10009  0.715
2002 Kombo DC, Jayaram B, Mcconnell KJ, Beveridge DL. Calculation of the affinity of the λ repressor-operator complex based on free energy component analysis Molecular Simulation. 28: 187-211. DOI: 10.1080/08927020211970  0.666
2001 McConnell KJ, Beveridge DL. Molecular dynamics simulations of B '-DNA: sequence effects on A-tract-induced bending and flexibility. Journal of Molecular Biology. 314: 23-40. PMID 11724529 DOI: 10.1006/Jmbi.2001.4926  0.631
2001 Kombo DC, McConnell KJ, Young MA, Beveridge DL. Molecular dynamics simulation reveals sequence-intrinsic and protein-induced geometrical features of the OL1 DNA operator. Biopolymers. 59: 205-25. PMID 11473347 DOI: 10.1002/1097-0282(20011005)59:4<205::Aid-Bip1019>3.0.Co;2-4  0.714
2001 Blakaj DM, McConnell KJ, Beveridge DL, Baranger AM. Molecular dynamics and thermodynamics of protein-RNA interactions: mutation of a conserved aromatic residue modifies stacking interactions and structural adaptation in the U1A-stem loop 2 RNA complex. Journal of the American Chemical Society. 123: 2548-51. PMID 11456923 DOI: 10.1021/Ja005538J  0.572
2000 McConnell KJ, Beveridge DL. DNA structure: what's in charge? Journal of Molecular Biology. 304: 803-20. PMID 11124028 DOI: 10.1006/Jmbi.2000.4167  0.63
2000 Beveridge DL, McConnell KJ. Nucleic acids: theory and computer simulation, Y2K. Current Opinion in Structural Biology. 10: 182-96. PMID 10753816 DOI: 10.1016/S0959-440X(00)00076-2  0.606
1999 Manoj N, Srinivas VR, Surolia A, Vijayan M, Suguna K, Ravishankar R, Schwarzenbacher R, Zeth K, Diederichs, Kostner GM, Gries A, Laggner P, Prassl R, Madhusudan, Akamine P, ... ... McConnell K, et al. Contributory presentations/posters Journal of Biosciences. 24: 33-198. DOI: 10.1007/Bf02989373  0.462
1999 Jayaram B, McConnell KJ, Dixit SB, Beveridge DL. Free Energy Analysis of Protein-DNA Binding: The EcoRI Endonuclease-DNA Complex Journal of Computational Physics. 151: 333-357. DOI: 10.1006/Jcph.1998.6173  0.725
1995 Beveridge DL, McConnell KJ, Young MA, Vijayakumar S, Ravishanker G. Molecular dynamics simulations of DNA and a protein-DNA complex including solvent Molecular Engineering. 5: 255-269. DOI: 10.1007/Bf00999594  0.677
1994 McConnell KJ, Nirmala R, Young MA, Ravishanker G, Beveridge DL. A nanosecond molecular dynamics trajectory for a B DNA double helix: Evidence for substates Journal of the American Chemical Society. 116: 4461-4462. DOI: 10.1021/Ja00089A039  0.631
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