Karuna Sampath - Publications

Affiliations: 
University of Warwick, Coventry, England, United Kingdom 
Area:
Embryonic Development, coding & non-coding RNAs, RNA localisation, Translational control, Microtubules, Nodal Signaling, Xenopus, Zebrafish

29 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2021 Vong YH, Sivashanmugam L, Leech R, Zaucker A, Jones A, Sampath K. The RNA-binding protein Igf2bp3 is critical for embryonic and germline development in zebrafish. Plos Genetics. 17: e1009667. PMID 34214072 DOI: 10.1371/journal.pgen.1009667  0.361
2019 Zaucker A, Kumari P, Sampath K. Zebrafish embryogenesis - A framework to study regulatory RNA elements in development and disease. Developmental Biology. PMID 30659794 DOI: 10.1016/j.ydbio.2019.01.008  0.685
2017 Zaucker A, Nagorska A, Kumari P, Hecker N, Wang Y, Huang S, Cooper L, Sivashanmugam L, VijayKumar S, Brosens J, Gorodkin J, Sampath K. Translational co-regulation of a ligand and inhibitor by a conserved RNA element. Nucleic Acids Research. PMID 29059375 DOI: 10.1093/nar/gkx938  0.733
2016 Wang Y, Wang X, Wohland T, Sampath K. Extracellular interactions and ligand degradation shape the Nodal morphogen gradient. Elife. 5. PMID 27101364 DOI: 10.7554/Elife.13879  0.346
2016 Vrljicak P, Tao S, Varshney GK, Quach HN, Joshi A, LaFave MC, Burgess SM, Sampath K. Genome-Wide Analysis of Transposon and Retroviral Insertions Reveals Preferential Integrations in Regions of DNA Flexibility. G3 (Bethesda, Md.). PMID 26818075 DOI: 10.1534/G3.115.026849  0.728
2015 Kumari P, Sampath K. cncRNAs: Bi-functional RNAs with protein coding and non-coding functions. Seminars in Cell & Developmental Biology. 47: 40-51. PMID 26498036 DOI: 10.1016/j.semcdb.2015.10.024  0.672
2015 Quach HN, Tao S, Vrljicak P, Joshi A, Ruan H, Sukumaran R, Varshney GK, LaFave MC, Burgess SM, Winkler C, Emelyanov A, Parinov S, Sampath K. A Multifunctional Mutagenesis System for Analysis of Gene Function in Zebrafish. G3 (Bethesda, Md.). 5: 1283-99. PMID 25840430 DOI: 10.1534/G3.114.015842  0.75
2015 Kumari P, Sampath K. CncRNAs: Bi-functional RNAs with protein coding and non-coding functions Seminars in Cell and Developmental Biology. 47: 40-51. DOI: 10.1016/j.semcdb.2015.10.024  0.647
2014 Young T, Poobalan Y, Tan EK, Tao S, Ong S, Wehner P, Schwenty-Lara J, Lim CY, Sadasivam A, Lovatt M, Wang ST, Ali Y, Borchers A, Sampath K, Dunn NR. The PDZ domain protein Mcc is a novel effector of non-canonical Wnt signaling during convergence and extension in zebrafish. Development (Cambridge, England). 141: 3505-16. PMID 25183869 DOI: 10.1242/Dev.114033  0.786
2013 Kumari P, Gilligan PC, Lim S, Tran LD, Winkler S, Philp R, Sampath K. An essential role for maternal control of Nodal signaling. Elife. 2: e00683. PMID 24040511 DOI: 10.7554/Elife.00683  0.767
2013 Lim S, Wang Y, Yu X, Huang Y, Featherstone MS, Sampath K. A simple strategy for heritable chromosomal deletions in zebrafish via the combinatorial action of targeting nucleases. Genome Biology. 14: R69. PMID 23815890 DOI: 10.1186/Gb-2013-14-7-R69  0.679
2013 Kumari P, Gilligan PC, Lim S, Tran LD, Winkler S, Philp R, Sampath K. Author response: An essential role for maternal control of Nodal signaling Elife. DOI: 10.7554/Elife.00683.020  0.737
2012 Tran LD, Hino H, Quach H, Lim S, Shindo A, Mimori-Kiyosue Y, Mione M, Ueno N, Winkler C, Hibi M, Sampath K. Dynamic microtubules at the vegetal cortex predict the embryonic axis in zebrafish. Development (Cambridge, England). 139: 3644-52. PMID 22949618 DOI: 10.1242/Dev.082362  0.763
2012 Lim S, Kumari P, Gilligan P, Quach HN, Mathavan S, Sampath K. Dorsal activity of maternal squint is mediated by a non-coding function of the RNA. Development (Cambridge, England). 139: 2903-15. PMID 22721777 DOI: 10.1242/Dev.077081  0.799
2012 Gore AV, Maegawa S, Cheong A, Gilligan PC, Weinberg ES, Sampath K. Erratum: Corrigendum: The zebrafish dorsal axis is apparent at the four-cell stage Nature. 494: 130-130. DOI: 10.1038/Nature11788  0.729
2011 Gilligan PC, Kumari P, Lim S, Cheong A, Chang A, Sampath K. Conservation defines functional motifs in the squint/nodal-related 1 RNA dorsal localization element. Nucleic Acids Research. 39: 3340-9. PMID 21149265 DOI: 10.1093/Nar/Gkq1185  0.78
2010 Tao S, Sampath K. Alternative splicing of SMADs in differentiation and tissue homeostasis. Development, Growth & Differentiation. 52: 335-42. PMID 20148926 DOI: 10.1111/J.1440-169X.2009.01163.X  0.774
2009 Tao S, Cai Y, Sampath K. The Integrator subunits function in hematopoiesis by modulating Smad/BMP signaling. Development (Cambridge, England). 136: 2757-65. PMID 19605500 DOI: 10.1242/Dev.034959  0.804
2009 Lim S, Kumari P, Gilligan P, Sampath K. 04-P006 Dorsal axis formation by maternal zebrafish squint is mediated by a non-coding function of the RNA Mechanisms of Development. 126: S108. DOI: 10.1016/J.Mod.2009.06.191  0.774
2008 Tian J, Andrée B, Jones CM, Sampath K. The pro-domain of the zebrafish Nodal-related protein Cyclops regulates its signaling activities. Development (Cambridge, England). 135: 2649-58. PMID 18579681 DOI: 10.1242/Dev.019794  0.466
2008 Gilligan PC, Sampath K. Reining in RNA. Workshop on intracellular RNA localization and localized translation. Embo Reports. 9: 22-6. PMID 18084187 DOI: 10.1038/Sj.Embor.7401140  0.787
2007 Gore AV, Cheong A, Gilligan PC, Sampath K. Gore et al. reply Nature. 450: E2-E4. DOI: 10.1038/Nature06315  0.759
2006 Ramasamy S, Wang H, Quach HN, Sampath K. Zebrafish Staufen1 and Staufen2 are required for the survival and migration of primordial germ cells. Developmental Biology. 292: 393-406. PMID 16513105 DOI: 10.1016/J.Ydbio.2006.01.014  0.408
2005 Gore AV, Maegawa S, Cheong A, Gilligan PC, Weinberg ES, Sampath K. The zebrafish dorsal axis is apparent at the four-cell stage. Nature. 438: 1030-5. PMID 16355228 DOI: 10.1038/Nature04184  0.795
2003 Tian J, Yam C, Balasundaram G, Wang H, Gore A, Sampath K. A temperature-sensitive mutation in the nodal-related gene cyclops reveals that the floor plate is induced during gastrulation in zebrafish. Development (Cambridge, England). 130: 3331-42. PMID 12783802 DOI: 10.1242/Dev.00544  0.753
2002 Gore AV, Sampath K. Localization of transcripts of the zebrafish morphogen Squint is dependent on egg activation and the microtubule cytoskeleton. Mechanisms of Development. 112: 153-6. PMID 11850186 DOI: 10.1016/S0925-4773(01)00622-0  0.758
1999 Shimasaki S, Zachow RJ, Li D, Kim H, Iemura S, Ueno N, Sampath K, Chang RJ, Erickson GF. A functional bone morphogenetic protein system in the ovary. Proceedings of the National Academy of Sciences of the United States of America. 96: 7282-7. PMID 10377406 DOI: 10.1073/Pnas.96.13.7282  0.335
1998 Sampath K, Rubinstein AL, Cheng AM, Liang JO, Fekany K, Solnica-Krezel L, Korzh V, Halpern ME, Wright CV. Induction of the zebrafish ventral brain and floorplate requires cyclops/nodal signalling. Nature. 395: 185-9. PMID 9744278 DOI: 10.1038/26020  0.749
1997 Sampath K, Cheng AM, Frisch A, Wright CV. Functional differences among Xenopus nodal-related genes in left-right axis determination. Development (Cambridge, England). 124: 3293-302. PMID 9310324  0.632
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