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Sruthilaya K. Swaminathan - Publications

Affiliations: 
2012 Neurobiology University of Chicago, Chicago, IL 
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31/61 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2017 Chaisangmongkon W, Swaminathan SK, Freedman DJ, Wang XJ. Computing by Robust Transience: How the Fronto-Parietal Network Performs Sequential, Category-Based Decisions. Neuron. 93: 1504-1517.e4. PMID 28334612 DOI: 10.1016/j.neuron.2017.03.002  0.607
2014 Swaminathan S, Garg S, Madkaikar M, Gupta M, Jijina F, Ghosh K. FLT3 and NPM-1 mutations in a cohort of acute promyelocytic leukemia patients from India. Indian Journal of Human Genetics. 20: 160-5. PMID 25400345 DOI: 10.4103/0971-6866.142884  0.37
2014 Yusuf S, Rangarajan S, Teo K, Islam S, Li W, Liu L, Bo J, Lou Q, Lu F, Liu T, Yu L, Zhang S, Mony P, Swaminathan S, Mohan V, et al. Cardiovascular risk and events in 17 low-, middle-, and high-income countries. The New England Journal of Medicine. 371: 818-27. PMID 25162888 DOI: 10.1056/Nejmoa1311890  0.341
2014 Usacheva M, Swaminathan SK, Kirtane AR, Panyam J. Enhanced photodynamic therapy and effective elimination of cancer stem cells using surfactant-polymer nanoparticles. Molecular Pharmaceutics. 11: 3186-95. PMID 25061685 DOI: 10.1021/Mp5003619  0.377
2014 Arora S, Swaminathan SK, Kirtane A, Srivastava SK, Bhardwaj A, Singh S, Panyam J, Singh AP. Synthesis, characterization, and evaluation of poly (D,L-lactide-co-glycolide)-based nanoformulation of miRNA-150: potential implications for pancreatic cancer therapy. International Journal of Nanomedicine. 9: 2933-42. PMID 24971005 DOI: 10.2147/Ijn.S61949  0.364
2014 Jaruszewski KM, Curran GL, Swaminathan SK, Rosenberg JT, Grant SC, Ramakrishnan S, Lowe VJ, Poduslo JF, Kandimalla KK. Multimodal nanoprobes to target cerebrovascular amyloid in Alzheimer's disease brain. Biomaterials. 35: 1967-76. PMID 24331706 DOI: 10.1016/J.Biomaterials.2013.10.075  0.39
2014 Laxman Singh K, Sudhakar G, Swaminathan SK, Muralidhar Rao C. Identification of elite native plants species for phytoaccumulation and remediation of major contaminants in uranium tailing ponds and its affected area Environment, Development and Sustainability. 17: 57-81. DOI: 10.1007/s10668-014-9536-7  0.361
2013 Ohlfest JR, Zellmer DM, Panyam J, Swaminathan SK, Oh S, Waldron NN, Toma S, Vallera DA. Immunotoxin targeting CD133(+) breast carcinoma cells. Drug Delivery and Translational Research. 3: 195-204. PMID 25787984 DOI: 10.1007/S13346-012-0066-2  0.402
2013 Swaminathan SK, Niu L, Waldron N, Kalscheuer S, Zellmer DM, Olin MR, Ohlfest JR, Vallera DA, Panyam J. Identification and characterization of a novel scFv recognizing human and mouse CD133. Drug Delivery and Translational Research. 3: 143-51. PMID 25787982 DOI: 10.1007/S13346-012-0099-6  0.381
2013 Subramanian S, Beans-Picón G, Swaminathan SK, Millar CD, Lambert DM. Evidence for a recent origin of penguins. Biology Letters. 9: 20130748. PMID 24227045 DOI: 10.1098/Rsbl.2013.0748  0.366
2013 Italia K, Jijina F, Merchant R, Swaminathan S, Nadkarni A, Gupta M, Ghosh K, Colah R. Comparison of in-vitro and in-vivo response to fetal hemoglobin production and γ-mRNA expression by hydroxyurea in Hemoglobinopathies. Indian Journal of Human Genetics. 19: 251-8. PMID 24019630  0.38
2013 Goble AM, Toro R, Li X, Ornelas A, Fan H, Eswaramoorthy S, Patskovsky Y, Hillerich B, Seidel R, Sali A, Shoichet BK, Almo SC, Swaminathan S, Tanner ME, Raushel FM. Deamination of 6-aminodeoxyfutalosine in menaquinone biosynthesis by distantly related enzymes. Biochemistry. 52: 6525-36. PMID 23972005 DOI: 10.1021/Bi400750A  0.408
2013 Swaminathan SK, Masse NY, Freedman DJ. A comparison of lateral and medial intraparietal areas during a visual categorization task. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 33: 13157-70. PMID 23926269 DOI: 10.1523/JNEUROSCI.5723-12.2013  0.673
2013 Swaminathan SK, Roger E, Toti U, Niu L, Ohlfest JR, Panyam J. CD133-targeted paclitaxel delivery inhibits local tumor recurrence in a mouse model of breast cancer. Journal of Controlled Release : Official Journal of the Controlled Release Society. 171: 280-7. PMID 23871962 DOI: 10.1016/J.Jconrel.2013.07.014  0.401
2013 Ananthakrishnan R, Kumar K, Ganesh M, Kumar AM, Krishnan N, Swaminathan S, Edginton M, K A, Gupta D. The profile and treatment outcomes of the older (aged 60 years and above) tuberculosis patients in Tamilnadu, South India. Plos One. 8: e67288. PMID 23861755 DOI: 10.1371/journal.pone.0067288  0.349
2013 Ornelas A, Korczynska M, Ragumani S, Kumaran D, Narindoshvili T, Shoichet BK, Swaminathan S, Raushel FM. Functional annotation and three-dimensional structure of an incorrectly annotated dihydroorotase from cog3964 in the amidohydrolase superfamily. Biochemistry. 52: 228-38. PMID 23214420 DOI: 10.1021/Bi301483Z  0.395
2012 Fitzgerald JK, Swaminathan SK, Freedman DJ. Visual categorization and the parietal cortex. Frontiers in Integrative Neuroscience. 6: 18. PMID 22582040 DOI: 10.3389/fnint.2012.00018  0.64
2012 Kumar G, Kumaran D, Ahmed SA, Swaminathan S. Peptide inhibitors of botulinum neurotoxin serotype A: design, inhibition, cocrystal structures, structure-activity relationship and pharmacophore modeling. Acta Crystallographica. Section D, Biological Crystallography. 68: 511-20. PMID 22525749 DOI: 10.1107/S0907444912003551  0.39
2012 Swaminathan SK, Freedman DJ. Preferential encoding of visual categories in parietal cortex compared with prefrontal cortex. Nature Neuroscience. 15: 315-20. PMID 22246435 DOI: 10.1038/nn.3016  0.647
2012 Lu X, Zhou R, Sharma I, Li X, Kumar G, Swaminathan S, Tonge PJ, Tan DS. Stable analogues of OSB-AMP: potent inhibitors of MenE, the o-succinylbenzoate-CoA synthetase from bacterial menaquinone biosynthesis. Chembiochem : a European Journal of Chemical Biology. 13: 129-36. PMID 22109989 DOI: 10.1002/Cbic.201100585  0.405
2012 Agarwal R, Burley SK, Swaminathan S. Structural insight into mechanism and diverse substrate selection strategy of L-ribulokinase. Proteins. 80: 261-8. PMID 22072612 DOI: 10.1002/Prot.23202  0.388
2011 Kamat SS, Holmes-Hampton GP, Bagaria A, Kumaran D, Tichy SE, Gheyi T, Zheng X, Bain K, Groshong C, Emtage S, Sauder JM, Burley SK, Swaminathan S, Lindahl PA, Raushel FM. The catalase activity of diiron adenine deaminase. Protein Science : a Publication of the Protein Society. 20: 2080-94. PMID 21998098 DOI: 10.1002/Pro.748  0.391
2011 Suzuki K, Ishida T, Yamagishi M, Ahlenstiel C, Swaminathan S, Marks K, Murray D, McCartney EM, Beard MR, Alexander M, Purcell DF, Cooper DA, Watanabe T, Kelleher AD. Transcriptional gene silencing of HIV-1 through promoter targeted RNA is highly specific. Rna Biology. 8: 1035-46. PMID 21955498 DOI: 10.4161/rna.8.6.16264  0.378
2011 Goble AM, Zhang Z, Sauder JM, Burley SK, Swaminathan S, Raushel FM. Pa0148 from Pseudomonas aeruginosa catalyzes the deamination of adenine. Biochemistry. 50: 6589-97. PMID 21710971 DOI: 10.1021/Bi200868U  0.41
2011 Kamat SS, Bagaria A, Kumaran D, Holmes-Hampton GP, Fan H, Sali A, Sauder JM, Burley SK, Lindahl PA, Swaminathan S, Raushel FM. Catalytic mechanism and three-dimensional structure of adenine deaminase. Biochemistry. 50: 1917-27. PMID 21247091 DOI: 10.1021/Bi101788N  0.4
2011 Callebaut C, Stray K, Tsai L, Williams M, Yang ZY, Cannizzaro C, Leavitt SA, Liu X, Wang K, Murray BP, Mulato A, Hatada M, Priskich T, Parkin N, Swaminathan S, et al. In vitro characterization of GS-8374, a novel phosphonate-containing inhibitor of HIV-1 protease with a favorable resistance profile. Antimicrobial Agents and Chemotherapy. 55: 1366-76. PMID 21245449 DOI: 10.1128/AAC.01183-10  0.408
2010 Swaminathan SK, Olin MR, Forster CL, Cruz KS, Panyam J, Ohlfest JR. Identification of a novel monoclonal antibody recognizing CD133. Journal of Immunological Methods. 361: 110-5. PMID 20674577 DOI: 10.1016/J.Jim.2010.07.007  0.387
2010 Shahani K, Swaminathan SK, Freeman D, Blum A, Ma L, Panyam J. Injectable sustained release microparticles of curcumin: a new concept for cancer chemoprevention. Cancer Research. 70: 4443-52. PMID 20460537 DOI: 10.1158/0008-5472.Can-09-4362  0.376
2010 Hall RS, Agarwal R, Hitchcock D, Sauder JM, Burley SK, Swaminathan S, Raushel FM. Discovery and structure determination of the orphan enzyme isoxanthopterin deaminase . Biochemistry. 49: 4374-82. PMID 20415463 DOI: 10.1021/Bi100252S  0.418
2010 Zhang J, Woodhead GJ, Swaminathan SK, Noles SR, McQuinn ER, Pisarek AJ, Stocker AM, Mutch CA, Funatsu N, Chenn A. Cortical neural precursors inhibit their own differentiation via N-cadherin maintenance of beta-catenin signaling. Developmental Cell. 18: 472-9. PMID 20230753 DOI: 10.1016/J.Devcel.2009.12.025  0.401
2010 Swaminathan S, Arbiser JL, Hiatt KM, High W, Abul-Ezz S, Horn TD, Shah SV. Rapid improvement of nephrogenic systemic fibrosis with rapamycin therapy: possible role of phospho-70-ribosomal-S6 kinase. Journal of the American Academy of Dermatology. 62: 343-5. PMID 20115955 DOI: 10.1016/j.jaad.2009.04.022  0.396
Low-probability matches (unlikely to be authored by this person)
2008 Legler PM, Kumaran D, Swaminathan S, Studier FW, Millard CB. Structural characterization and reversal of the natural organophosphate resistance of a D-type esterase, Saccharomyces cerevisiae S-formylglutathione hydrolase. Biochemistry. 47: 9592-601. PMID 18707125 DOI: 10.1021/Bi8010016  0.149
2009 Xiang DF, Xu C, Kumaran D, Brown AC, Sauder JM, Burley SK, Swaminathan S, Raushel FM. Functional annotation of two new carboxypeptidases from the amidohydrolase superfamily of enzymes. Biochemistry. 48: 4567-76. PMID 19358546 DOI: 10.1021/Bi900453U  0.147
2008 Kumaran D, Rawat R, Ludivico ML, Ahmed SA, Swaminathan S. Structure- and substrate-based inhibitor design for Clostridium botulinum neurotoxin serotype A. The Journal of Biological Chemistry. 283: 18883-91. PMID 18434312 DOI: 10.1074/jbc.M801240200  0.144
2008 Agarwal R, Swaminathan S. SNAP-25 substrate peptide (residues 180-183) binds to but bypasses cleavage by catalytically active Clostridium botulinum neurotoxin E. The Journal of Biological Chemistry. 283: 25944-51. PMID 18658150 DOI: 10.1074/jbc.M803756200  0.106
2010 Patil YB, Swaminathan SK, Sadhukha T, Ma L, Panyam J. The use of nanoparticle-mediated targeted gene silencing and drug delivery to overcome tumor drug resistance. Biomaterials. 31: 358-65. PMID 19800114 DOI: 10.1016/J.Biomaterials.2009.09.048  0.094
1988 He XM, Swaminathan S, Craven BM, McMullan RK. Thermal vibrations and electrostatic properties of parabanic acid at 123 and 298 K. Acta Crystallographica. Section B, Structural Science. 44: 271-81. PMID 3271109 DOI: 10.1107/S0108768187011108  0.093
1989 Ravishanker G, Swaminathan S, Beveridge DL, Lavery R, Sklenar H. Conformational and helicoidal analysis of 30 PS of molecular dynamics on the d(CGCGAATTCGCG) double helix: "curves", dials and windows. Journal of Biomolecular Structure & Dynamics. 6: 669-99. PMID 2619934 DOI: 10.1080/07391102.1989.10507729  0.091
2005 Navin Gupta C, Palaniappan R, Swaminathan S. Classification of homomorphic segmented phonocardiogram signals using grow and learn network. Conference Proceedings : ... Annual International Conference of the Ieee Engineering in Medicine and Biology Society. Ieee Engineering in Medicine and Biology Society. Annual Conference. 4: 4251-4. PMID 17281173 DOI: 10.1109/IEMBS.2005.1615403  0.091
2019 Zhou AL, Swaminathan SK, Curran GL, Poduslo JF, Lowe VJ, Li L, Kandimalla KK. Apolipoprotein A-I crosses the blood-brain barrier through clathrin-independent and cholesterol-mediated endocytosis. The Journal of Pharmacology and Experimental Therapeutics. PMID 30971477 DOI: 10.1124/Jpet.118.254201  0.084
2019 Kasinathan G, Sahu SS, Nallan K, Tharmalingam V, Swaminathan S, Behera KP, Pradhan MM, Purusothaman J. Comparative efficacy of two rounds of indoor residual spraying of DDT 75% @ 1g/m with that of DDT 50% @ 1g/m against the malaria vectors in India. Acta Tropica. 194: 123-134. PMID 30943380 DOI: 10.1016/j.actatropica.2019.03.028  0.079
2001 Kumaran D, Eswaramoorthy S, Furey W, Sax M, Swaminathan S. Structure of staphylococcal enterotoxin C2 at various pH levels. Acta Crystallographica. Section D, Biological Crystallography. 57: 1270-5. PMID 11526318 DOI: 10.1107/S0907444901011118  0.073
2004 Visco DP, Swaminathan S, Mohan TR, Sokolow A, Sen S. Impulse penetration into idealized granular beds: behavior of cumulative surface kinetic energy. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 70: 051306. PMID 15600602 DOI: 10.1103/Physreve.70.051306  0.071
2018 McNutt MK, Bradford M, Drazen JM, Hanson B, Howard B, Jamieson KH, Kiermer V, Marcus E, Pope BK, Schekman R, Swaminathan S, Stang PJ, Verma IM. Transparency in authors' contributions and responsibilities to promote integrity in scientific publication. Proceedings of the National Academy of Sciences of the United States of America. PMID 29487213 DOI: 10.1073/Pnas.1715374115  0.069
2019 Schulze KV, Swaminathan S, Howell S, Jajoo A, Lie NC, Brown O, Sadat R, Hall N, Zhao L, Marshall K, May T, Reid ME, Taylor-Bryan C, Wang X, Belmont JW, et al. Edematous severe acute malnutrition is characterized by hypomethylation of DNA. Nature Communications. 10: 5791. PMID 31857576 DOI: 10.1038/S41467-019-13433-6  0.067
1992 Klooster WT, Swaminathan S, Nanni R, Craven BM. Electrostatic properties of 1-methyluracil from diffraction data. Acta Crystallographica. Section B, Structural Science. 48: 217-27. PMID 1515111 DOI: 10.1107/S0108768191013319  0.067
2020 Swaminathan SK, Zhou AL, Ahlschwede KM, Curran GL, Lowe VJ, Li L, Kandimalla KK. HDL mimetic peptide 4F efficiently crosses the blood-brain barrier and modulates amyloid beta distribution between brain and plasma. The Journal of Pharmacology and Experimental Therapeutics. PMID 32778535 DOI: 10.1124/Jpet.120.265876  0.058
2009 Pink CJ, Swaminathan SK, Dunham I, Rogers J, Ward A, Hurst LD. Evidence that replication-associated mutation alone does not explain between-chromosome differences in substitution rates. Genome Biology and Evolution. 1: 13-22. PMID 20333173 DOI: 10.1093/gbe/evp001  0.058
2019 Rajeev S, Veeraraghavan B, Hegde A, Jiandani P, Mehta Y, Nagavekar V, Rodrigues C, Singh RK, Swaminathan S, Todi S, Varma S, Patil S, Barkate H. Indian consensus on the management of CRE infection in critically ill patients (ICONIC) - India. Expert Review of Anti-Infective Therapy. 1-13. PMID 31375039 DOI: 10.1080/14787210.2019.1647103  0.057
2007 Madkaikar M, Gupta M, Ghosh K, Swaminathan S, Sonawane L, Mohanty D. Optimising methods of red cell sedimentation from cord blood to maximise nucleated cell recovery prior to cryopreservation. British Journal of Biomedical Science. 64: 157-9. PMID 18236736  0.056
2006 Albu TV, Swaminathan S. Hybrid density functional theory with specific reaction parameter: hydrogen abstraction reaction of fluoromethane by the hydroxyl radical. The Journal of Physical Chemistry. A. 110: 7663-71. PMID 16774212 DOI: 10.1021/jp0615454  0.056
2018 Munusamy Ponnan S, Swaminathan S, Tiruvengadam K, K K V, Cheedarla N, Nesakumar M, Kathirvel S, Goyal R, Singla N, Mukherjee J, Bergin P, T Kopycinski J, Gilmour J, Prasad Tripathy S, Elizabeth LH. Induction of circulating T follicular helper cells and regulatory T cells correlating with HIV-1 gp120 variable loop antibodies by a subtype C prophylactic vaccine tested in a Phase I trial in India. Plos One. 13: e0203037. PMID 30157242 DOI: 10.1371/journal.pone.0203037  0.055
2017 Manson AL, Cohen KA, Abeel T, Desjardins CA, Armstrong DT, Barry CE, Brand J, Chapman SB, Cho SN, Gabrielian A, Gomez J, Jodals AM, Joloba M, Jureen P, ... ... Swaminathan S, et al. Genomic analysis of globally diverse Mycobacterium tuberculosis strains provides insights into the emergence and spread of multidrug resistance. Nature Genetics. PMID 28092681 DOI: 10.1038/Ng.3767  0.052
2007 Barreto G, Schäfer A, Marhold J, Stach D, Swaminathan SK, Handa V, Döderlein G, Maltry N, Wu W, Lyko F, Niehrs C. Gadd45a promotes epigenetic gene activation by repair-mediated DNA demethylation. Nature. 445: 671-5. PMID 17268471 DOI: 10.1038/Nature05515  0.052
1985 Levy RM, Sheridan RP, Keepers JW, Dubey GS, Swaminathan S, Karplus M. Molecular dynamics of myoglobin at 298 degrees K. Results from a 300-ps computer simulation. Biophysical Journal. 48: 509-18. PMID 3840041 DOI: 10.1016/S0006-3495(85)83806-6  0.052
2020 Mishra B, Balaji A, Beesetti H, Swaminathan S, Aduri R. The RNA secondary structural variation in the cyclization elements of the dengue genome and the possible implications in pathogenicity. Virusdisease. 31: 299-307. PMID 32904896 DOI: 10.1007/s13337-020-00615-w  0.05
2007 Albu TV, Swaminathan S. Hybrid density functional theory with a specific reaction parameter: hydrogen abstraction reaction of difluoromethane by the hydroxyl radical. Journal of Molecular Modeling. 13: 1109-21. PMID 17704956 DOI: 10.1007/s00894-007-0235-2  0.048
2018 Gupta V, Katz R, Swaminathan S. Reimagining Development Assistance for Health. The New England Journal of Medicine. PMID 30256712 DOI: 10.1056/Nejmp1809808  0.033
1982 Mitra SK, Ghosh BN, Rao B, Swaminathan SK. Evaluation of checker bricks for blast furnace stoves Transactions of the Indian Ceramic Society. 41: 105-109. DOI: 10.1080/0371750X.1982.10822585  0.017
2005 Swaminathan SK. Indian Petroleum Scenario - Current challenges and opportunities for auto fuels and lubricants Fuels and Lubes International. 11: 19.  0.011
2005 Swaminathan SK. Indian petroleum scenario - Current challenges & opportunities for auto fuel and lubricants Annual Fuels and Lubes Asia Conference and Exhibition. 11.  0.011
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