Year |
Citation |
Score |
2020 |
Van Nostrand EL, Freese P, Pratt GA, Wang X, Wei X, Xiao R, Blue SM, Chen JY, Cody NAL, Dominguez D, Olson S, Sundararaman B, Zhan L, Bazile C, Bouvrette LPB, ... ... Duff MO, et al. A large-scale binding and functional map of human RNA-binding proteins. Nature. 583: 711-719. PMID 32728246 DOI: 10.1038/S41586-020-2077-3 |
0.372 |
|
2019 |
Kumar D, Chaudhary S, Lu N, Duff M, Heffel M, McKinney CA, Bedenice D, Marthaler D. Metagenomic Next-Generation Sequencing Reveal Presence of a Novel Ungulate in Alpacas. Viruses. 11. PMID 31370351 DOI: 10.3390/V11080701 |
0.303 |
|
2017 |
Yang J, Lee J, Ma J, Lang Y, Nietfeld J, Li Y, Duff M, Li Y, Yang Y, Liu H, Zhou B, Wentworth DE, Richt JA, Li Z, Ma W. Pathogenicity of modified bat influenza virus with different M genes and its reassortment potential with swine influenza A virus. The Journal of General Virology. PMID 28100299 DOI: 10.1099/Jgv.0.000715 |
0.308 |
|
2016 |
Nagy A, Lee J, Mena I, Henningson J, Li Y, Ma J, Duff M, Li Y, Lang Y, Yang J, Abdallah F, Richt J, Ali A, García-Sastre A, Ma W. Recombinant Newcastle disease virus expressing H9 HA protects chickens against heterologous avian influenza H9N2 virus challenge. Vaccine. PMID 27102817 DOI: 10.1016/J.Vaccine.2016.04.022 |
0.302 |
|
2015 |
Garren SB, Kondaveeti Y, Duff MO, Carmichael GG. Global Analysis of Mouse Polyomavirus Infection Reveals Dynamic Regulation of Viral and Host Gene Expression and Promiscuous Viral RNA Editing. Plos Pathogens. 11: e1005166. PMID 26407100 DOI: 10.1371/Journal.Ppat.1005166 |
0.4 |
|
2015 |
Stoiber MH, Olson S, May GE, Duff MO, Manent J, Obar R, Guruharsha K, Artavanis-Tsakonas S, Brown JB, Graveley BR, Celniker SE. Extensive cross-regulation of post-transcriptional regulatory networks in Drosophila. Genome Research. PMID 26294687 DOI: 10.1101/Gr.182675.114 |
0.381 |
|
2015 |
Brooks AN, Duff MO, May G, Yang L, Bolisetty M, Landolin J, Wan K, Sandler J, Celniker SE, Graveley BR, Brenner SE. Regulation of alternative splicing in Drosophila by 56 RNA binding proteins. Genome Research. PMID 26294686 DOI: 10.1101/Gr.192518.115 |
0.369 |
|
2015 |
Duff MO, Olson S, Wei X, Garrett SC, Osman A, Bolisetty M, Plocik A, Celniker SE, Graveley BR. Genome-wide identification of zero nucleotide recursive splicing in Drosophila. Nature. 521: 376-9. PMID 25970244 DOI: 10.1038/Nature14475 |
0.378 |
|
2015 |
Ma J, Shen H, Liu Q, Bawa B, Qi W, Duff M, Lang Y, Lee J, Yu H, Bai J, Tong G, Hesse RA, Richt JA, Ma W. Pathogenicity and transmissibility of novel reassortant H3N2 influenza viruses with 2009 pandemic H1N1 genes in pigs. Journal of Virology. 89: 2831-41. PMID 25540372 DOI: 10.1128/Jvi.03355-14 |
0.316 |
|
2014 |
Zhou B, Ma J, Liu Q, Bawa B, Wang W, Shabman RS, Duff M, Lee J, Lang Y, Cao N, Nagy A, Lin X, Stockwell TB, Richt JA, Wentworth DE, et al. Characterization of uncultivable bat influenza virus using a replicative synthetic virus. Plos Pathogens. 10: e1004420. PMID 25275541 DOI: 10.1371/Journal.Ppat.1004420 |
0.312 |
|
2014 |
Gerstein MB, Rozowsky J, Yan KK, Wang D, Cheng C, Brown JB, Davis CA, Hillier L, Sisu C, Li JJ, Pei B, Harmanci AO, Duff MO, Djebali S, Alexander RP, et al. Comparative analysis of the transcriptome across distant species. Nature. 512: 445-8. PMID 25164755 DOI: 10.1038/Nature13424 |
0.348 |
|
2014 |
Chen ZX, Sturgill D, Qu J, Jiang H, Park S, Boley N, Suzuki AM, Fletcher AR, Plachetzki DC, FitzGerald PC, Artieri CG, Atallah J, Barmina O, Brown JB, Blankenburg KP, ... ... Duff MO, et al. Comparative validation of the D. melanogaster modENCODE transcriptome annotation. Genome Research. 24: 1209-23. PMID 24985915 DOI: 10.1101/Gr.159384.113 |
0.309 |
|
2014 |
Brown JB, Boley N, Eisman R, May GE, Stoiber MH, Duff MO, Booth BW, Wen J, Park S, Suzuki AM, Wan KH, Yu C, Zhang D, Carlson JW, Cherbas L, et al. Diversity and dynamics of the Drosophila transcriptome. Nature. 512: 393-9. PMID 24670639 DOI: 10.1038/Nature12962 |
0.4 |
|
2012 |
Smibert P, Miura P, Westholm JO, Shenker S, May G, Duff MO, Zhang D, Eads BD, Carlson J, Brown JB, Eisman RC, Andrews J, Kaufman T, Cherbas P, Celniker SE, et al. Global patterns of tissue-specific alternative polyadenylation in Drosophila. Cell Reports. 1: 277-89. PMID 22685694 DOI: 10.1016/J.Celrep.2012.01.001 |
0.349 |
|
2011 |
Yang L, Duff MO, Graveley BR, Carmichael GG, Chen LL. Genomewide characterization of non-polyadenylated RNAs. Genome Biology. 12: R16. PMID 21324177 DOI: 10.1186/Gb-2011-12-2-R16 |
0.359 |
|
2011 |
Graveley BR, Brooks AN, Carlson JW, Duff MO, Landolin JM, Yang L, Artieri CG, van Baren MJ, Boley N, Booth BW, Brown JB, Cherbas L, Davis CA, Dobin A, Li R, et al. The developmental transcriptome of Drosophila melanogaster. Nature. 471: 473-9. PMID 21179090 DOI: 10.1038/Nature09715 |
0.39 |
|
2011 |
Brooks AN, Yang L, Duff MO, Hansen KD, Park JW, Dudoit S, Brenner SE, Graveley BR. Conservation of an RNA regulatory map between Drosophila and mammals. Genome Research. 21: 193-202. PMID 20921232 DOI: 10.1101/Gr.108662.110 |
0.393 |
|
2010 |
Roy S, Ernst J, Kharchenko PV, Kheradpour P, Negre N, Eaton ML, Landolin JM, Bristow CA, Ma L, Lin MF, Washietl S, Arshinoff BI, Ay F, Meyer PE, ... ... Duff MO, et al. Identification of functional elements and regulatory circuits by Drosophila modENCODE. Science (New York, N.Y.). 330: 1787-97. PMID 21177974 DOI: 10.1126/Science.1198374 |
0.357 |
|
2010 |
McManus CJ, Duff MO, Eipper-Mains J, Graveley BR. Global analysis of trans-splicing in Drosophila. Proceedings of the National Academy of Sciences of the United States of America. 107: 12975-9. PMID 20615941 DOI: 10.1073/Pnas.1007586107 |
0.395 |
|
2010 |
McManus CJ, Coolon JD, Duff MO, Eipper-Mains J, Graveley BR, Wittkopp PJ. Regulatory divergence in Drosophila revealed by mRNA-seq. Genome Research. 20: 816-25. PMID 20354124 DOI: 10.1101/Gr.102491.109 |
0.332 |
|
2009 |
Hale CR, Zhao P, Olson S, Duff MO, Graveley BR, Wells L, Terns RM, Terns MP. RNA-guided RNA cleavage by a CRISPR RNA-Cas protein complex. Cell. 139: 945-56. PMID 19945378 DOI: 10.1016/J.Cell.2009.07.040 |
0.339 |
|
1997 |
Duff MO, Barto AG. Local bandit approximation for optimal learning problems Advances in Neural Information Processing Systems. 1019-1025. |
0.419 |
|
Low-probability matches (unlikely to be authored by this person) |
2019 |
Ma J, Shen H, McDowell C, Liu Q, Duff M, Lee J, Lang Y, Hesse D, Richt JA, Ma W. Virus survival and fitness when multiple genotypes and subtypes of influenza A viruses exist and circulate in swine. Virology. 532: 30-38. PMID 31003122 DOI: 10.1016/J.Virol.2019.03.016 |
0.298 |
|
2011 |
Cherbas L, Willingham A, Zhang D, Yang L, Zou Y, Eads BD, Carlson JW, Landolin JM, Kapranov P, Dumais J, Samsonova A, Choi JH, Roberts J, Davis CA, Tang H, ... ... Duff MO, et al. The transcriptional diversity of 25 Drosophila cell lines. Genome Research. 21: 301-14. PMID 21177962 DOI: 10.1101/Gr.112961.110 |
0.287 |
|
2017 |
Lee J, Yu H, Li Y, Ma J, Lang Y, Duff M, Henningson J, Liu Q, Li Y, Nagy A, Bawa B, Li Z, Tong G, Richt JA, Ma W. Impacts of different expressions of PA-X protein on 2009 pandemic H1N1 virus replication, pathogenicity and host immune responses. Virology. 504: 25-35. PMID 28142079 DOI: 10.1016/J.Virol.2017.01.015 |
0.28 |
|
2016 |
Lee J, Henningson J, Ma J, Duff M, Lang Y, Li Y, Li Y, Nagy A, Sunwoo S, Bawa B, Yang J, Bai D, Richt JA, Ma W. Effects of PB1-F2 on the pathogenicity of H1N1 swine influenza virus in mice and pigs. The Journal of General Virology. PMID 28008819 DOI: 10.1099/Jgv.0.000695 |
0.277 |
|
2019 |
Lang Y, Li Y, Jasperson D, Henningson J, Lee J, Ma J, Li Y, Duff M, Liu H, Bai D, McVey S, Richt JA, Ikegami T, Wilson WC, Ma W. Identification and evaluation of antivirals for Rift Valley fever virus. Veterinary Microbiology. 230: 110-116. PMID 30827375 DOI: 10.1016/J.Vetmic.2019.01.027 |
0.271 |
|
2013 |
Eipper-Mains JE, Kiraly DD, Duff MO, Horowitz MJ, McManus CJ, Eipper BA, Graveley BR, Mains RE. Effects of cocaine and withdrawal on the mouse nucleus accumbens transcriptome. Genes, Brain, and Behavior. 12: 21-33. PMID 23094851 DOI: 10.1111/J.1601-183X.2012.00873.X |
0.267 |
|
1986 |
Rosendaal M, Adam J, Potter D, Duff M. Assessing cultured colonies automatically. Leukemia Research. 10: 539-47. PMID 3713249 DOI: 10.1016/0145-2126(86)90089-5 |
0.211 |
|
2005 |
Niv Y, Duff MO, Dayan P. Dopamine, uncertainty and TD learning. Behavioral and Brain Functions : Bbf. 1: 6. PMID 15953384 DOI: 10.1186/1744-9081-1-6 |
0.209 |
|
2017 |
Chang HH, Moro A, Takakura K, Su HY, Mo A, Nakanishi M, Waldron RT, French SW, Dawson DW, Hines OJ, Li G, Go VLW, Sinnett-Smith J, Pandol SJ, Lugea A, ... ... Duff MO, et al. Incidence of pancreatic cancer is dramatically increased by a high fat, high calorie diet in KrasG12D mice. Plos One. 12: e0184455. PMID 28886117 DOI: 10.1371/Journal.Pone.0184455 |
0.207 |
|
2017 |
Pilling LC, Atkins JL, Duff MO, Beaumont RN, Jones SE, Tyrrell J, Kuo CL, Ruth KS, Tuke MA, Yaghootkar H, Wood AR, Murray A, Weedon MN, Harries LW, Kuchel GA, et al. Red blood cell distribution width: Genetic evidence for aging pathways in 116,666 volunteers. Plos One. 12: e0185083. PMID 28957414 DOI: 10.1371/Journal.Pone.0185083 |
0.203 |
|
1984 |
Szilagyi M, Yakowitz SJ, Duff MO. PROCEDURE FOR ELECTRON AND ION LENS OPTIMIZATION. Applied Physics Letters. 44: 7-9. DOI: 10.1063/1.94559 |
0.199 |
|
2005 |
Castro S, Duff M, Snyder NL, Morton M, Kumar CV, Peczuh MW. Recognition of septanose carbohydrates by concanavalin A. Organic & Biomolecular Chemistry. 3: 3869-72. PMID 16239999 DOI: 10.1039/B509243D |
0.187 |
|
2021 |
Van Nostrand EL, Freese P, Pratt GA, Wang X, Wei X, Xiao R, Blue SM, Chen JY, Cody NAL, Dominguez D, Olson S, Sundararaman B, Zhan L, Bazile C, Bouvrette LPB, ... ... Duff MO, et al. Author Correction: A large-scale binding and functional map of human RNA-binding proteins. Nature. PMID 33402748 DOI: 10.1038/s41586-020-03067-w |
0.17 |
|
2014 |
McManus CJ, Coolon JD, Duff MO, Eipper-Mains J, Graveley BR, Wittkopp PJ. Regulatory divergence in Drosophila revealed by mRNA-seq (Genome Research (2010) 20, (816-825)) Genome Research. 24: 1051. |
0.163 |
|
2021 |
Lee J, Li Y, Li Y, Cino-Ozuna AG, Duff M, Lang Y, Ma J, Sunwoo S, Richt JA, Ma W. Bat influenza vectored NS1-truncated live vaccine protects pigs against heterologous virus challenge. Vaccine. PMID 33715905 DOI: 10.1016/j.vaccine.2021.02.077 |
0.16 |
|
2018 |
Ma J, Lee J, Liu H, Mena I, Davis AS, Sunwoo SY, Lang Y, Duff M, Morozov I, Li Y, Yang J, García-Sastre A, Richt JA, Ma W. Erratum: Author Correction: Newcastle disease virus-based H5 influenza vaccine protects chickens from lethal challenge with a highly pathogenic H5N2 avian influenza virus. Npj Vaccines. 3: 19. PMID 29799537 DOI: 10.1038/s41541-018-0054-8 |
0.155 |
|
2017 |
Ma J, Lee J, Liu H, Mena I, Davis AS, Sunwoo SY, Lang Y, Duff M, Morozov I, Li Y, Yang J, García-Sastre A, Richt JA, Ma W. Newcastle disease virus-based H5 influenza vaccine protects chickens from lethal challenge with a highly pathogenic H5N2 avian influenza virus. Npj Vaccines. 2: 33. PMID 29263888 DOI: 10.1038/s41541-017-0034-4 |
0.154 |
|
2018 |
van Gaalen S, Duff M, Arroyave LF, Rueda ZV, Kasper K, Keynan Y. Characteristics of hospital admissions for pneumonia in HIV-positive individuals in Winnipeg, Manitoba: a cross-sectional retrospective analysis. International Journal of Std & Aids. 29: 115-121. PMID 28661231 DOI: 10.1177/0956462417717654 |
0.067 |
|
2004 |
Smyth GP, Stapleton PP, Freeman TA, Concannon EM, Mestre JR, Duff M, Maddali S, Daly JM. Glucocorticoid pretreatment induces cytokine overexpression and nuclear factor-kappaB activation in macrophages. The Journal of Surgical Research. 116: 253-61. PMID 15013364 DOI: 10.1016/S0022-4804(03)00300-7 |
0.062 |
|
2002 |
Duff M, Ettarh R. Crypt cell production rate in the small intestine of the zinc-supplemented mouse. Cells, Tissues, Organs. 172: 21-8. PMID 12364825 |
0.059 |
|
2016 |
Harris DA, Thorne K, Hutchings H, Islam S, Holland G, Hatcher O, Gwynne S, Jenkins I, Coyne P, Duff M, Feldman M, Winter DC, Gollins S, Quirke P, West N, et al. Protocol for a multicentre randomised feasibility trial evaluating early Surgery Alone In LOw Rectal cancer (SAILOR). Bmj Open. 6: e012496. PMID 27872117 DOI: 10.1136/bmjopen-2016-012496 |
0.051 |
|
2016 |
Pokuri VK, Sule N, Perfetto C, Duff M, Kopp C, Guru K, Shah D, George S. A novel treatment approach prolonging survival in an uncommon metastatic primary bladder adenocarcinoma. The Journal of Community and Supportive Oncology. 14: 72-5. PMID 26955660 DOI: 10.12788/jcso.0218 |
0.05 |
|
2004 |
Maddali S, Stapleton PP, Freeman TA, Smyth GP, Duff M, Yan Z, Daly JM. Neuroendocrine responses mediate macrophage function after trauma. Surgery. 136: 1038-46. PMID 15523398 DOI: 10.1016/j.surg.2004.03.001 |
0.05 |
|
2004 |
Maddali S, Stapleton PP, Freeman TA, Yan Z, Duff M, Smyth GP, Daly JM. Altered cyclooxygenase-2 expression and nitric oxide metabolism following major elective surgery. The Journal of Surgical Research. 116: 211-8. PMID 15013358 DOI: 10.1016/S0022-4804(03)00344-5 |
0.05 |
|
2020 |
Mou Y, Dong Y, Chen Z, Denton KR, Duff MO, Blackstone C, Zhang SC, Li XJ. Impaired lipid metabolism in astrocytes underlies degeneration of cortical projection neurons in hereditary spastic paraplegia. Acta Neuropathologica Communications. 8: 214. PMID 33287888 DOI: 10.1186/s40478-020-01088-0 |
0.045 |
|
2003 |
Duff M, Stapleton PP, Mestre JR, Maddali S, Smyth GP, Yan Z, Freeman TA, Daly JM. Cyclooxygenase-2 inhibition improves macrophage function in melanoma and increases the antineoplastic activity of interferon gamma. Annals of Surgical Oncology. 10: 305-13. PMID 12679317 DOI: 10.1245/ASO.2003.04.033 |
0.042 |
|
2005 |
Matsuda T, Freeman TA, Hilbert DW, Duff M, Fuortes M, Stapleton PP, Daly JM. Lysis-deficient bacteriophage therapy decreases endotoxin and inflammatory mediator release and improves survival in a murine peritonitis model. Surgery. 137: 639-46. PMID 15933632 DOI: 10.1016/j.surg.2005.02.012 |
0.036 |
|
2014 |
Chevli KK, Duff M, Walter P, Yu C, Capuder B, Elshafei A, Malczewski S, Kattan MW, Jones JS. Urinary PCA3 as a predictor of prostate cancer in a cohort of 3,073 men undergoing initial prostate biopsy. The Journal of Urology. 191: 1743-8. PMID 24333241 DOI: 10.1016/J.Juro.2013.12.005 |
0.034 |
|
2012 |
Danforth TL, Chevli KK, Baumann L, Duff M. Low incidence of prostate cancer identified in the transition and anterior zones with transperineal biopsy. Research and Reports in Urology. 4: 71-6. PMID 24199184 DOI: 10.2147/RRU.S37868 |
0.032 |
|
2013 |
Bodkin JJ, Duff M, Seereiter PJ, Chevli KK. Sensorimotor polyneuropathy and foot-drop as result of a prostate cancer paraneoplastic syndrome. Research and Reports in Urology. 5: 159-62. PMID 24400247 DOI: 10.2147/RRU.S52712 |
0.032 |
|
2013 |
Chevli C, Narayanan R, Rambarran L, Kubicek G, Chevli KK, Duff M. Effect of pretreatment prostate volume on urinary quality of life following intensity-modulated radiation therapy for localized prostate cancer. Research and Reports in Urology. 5: 29-37. PMID 24400232 DOI: 10.2147/RRU.S38093 |
0.029 |
|
2011 |
Kopp RW, Duff M, Catalfamo F, Shah D, Rajecki M, Ahmad K. VMAT vs. 7-field-IMRT: assessing the dosimetric parameters of prostate cancer treatment with a 292-patient sample. Medical Dosimetry : Official Journal of the American Association of Medical Dosimetrists. 36: 365-72. PMID 21377863 DOI: 10.1016/j.meddos.2010.09.004 |
0.029 |
|
2013 |
Goode RR, Marshall SJ, Duff M, Chevli E, Chevli KK. Use of PCA3 in detecting prostate cancer in initial and repeat prostate biopsy patients. The Prostate. 73: 48-53. PMID 22585386 DOI: 10.1002/pros.22538 |
0.028 |
|
2015 |
Elshafei A, Chevli KK, Moussa AS, Kara O, Chueh SC, Walter P, Hatem A, Gao T, Jones JS, Duff M. PCA3-based nomogram for predicting prostate cancer and high grade cancer on initial transrectal guided biopsy. The Prostate. PMID 26384170 DOI: 10.1002/pros.23096 |
0.028 |
|
2006 |
Duff M, Dusenbery KE, Rodriguez FJ. Paraneoplastic encephalomyelitis: a case report and review of the literature. Gynecologic Oncology. 102: 593-5. PMID 16677693 DOI: 10.1016/J.Ygyno.2006.03.031 |
0.02 |
|
2014 |
Narins H, Chevli K, Gilbert R, Duff M, Toenniessen A, Hu Y. Bilateral spermatocytic seminoma: a case report. Research and Reports in Urology. 6: 63-5. PMID 25032177 DOI: 10.2147/RRU.S62302 |
0.019 |
|
1989 |
Duff MO. Backpropagation and Bach's 5th cello suite (Sarabande) Ijcnn Int Jt Conf Neural Network. 575. |
0.018 |
|
2015 |
Luong B, Danforth T, Visnjevac O, Suraf M, Duff M, Chevli KK. Reduction in hospital admissions with the addition of prophylactic intramuscular ceftriaxone before transrectal ultrasonography-guided prostate biopsies. Urology. 85: 511-6. PMID 25596154 DOI: 10.1016/j.urology.2014.10.047 |
0.016 |
|
2021 |
Conroy I, Mooney SS, Kavanagh S, Duff M, Jakab I, Robertson K, Fitzgerald AL, Mccutchan A, Madden S, Maxwell S, Nair S, Origanti N, Quinless A, Mirowski-Allen K, Sewell M, et al. Pelvic pain: What are the symptoms and predictors for surgery, endometriosis and endometriosis severity. The Australian & New Zealand Journal of Obstetrics & Gynaecology. PMID 34028794 DOI: 10.1111/ajo.13379 |
0.011 |
|
2006 |
Duff M, Cruchfield CE, Moore J, Farniok K, Potish RA, Gallego H. Radiation therapy for chronic vesicular hand dermatitis. Dermatitis : Contact, Atopic, Occupational, Drug. 17: 128-32. PMID 16956464 |
0.01 |
|
Hide low-probability matches. |