David C. Lyon - Publications

Affiliations: 
University of California, Irvine, Irvine, CA 
Area:
visual system
Website:
http://www.ucihs.uci.edu/anatomy/lyon.html

49/121 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2022 Leinonen H, Lyon DC, Palczewski K, Foik AT. Visual System Hyperexcitability and Compromised V1 Receptive Field Properties in Early-Stage Retinitis Pigmentosa in Mice. Eneuro. PMID 35701168 DOI: 10.1523/ENEURO.0107-22.2022  0.398
2021 Frankowski JC, Foik AT, Tierno A, Machhor JR, Lyon DC, Hunt RF. Traumatic brain injury to primary visual cortex produces long-lasting circuit dysfunction. Communications Biology. 4: 1297. PMID 34789835 DOI: 10.1038/s42003-021-02808-5  0.494
2020 Foik AT, Scholl LR, Lean GA, Lyon DC. Visual response characteristics in lateral and medial subdivisions of the rat pulvinar. Neuroscience. PMID 32599121 DOI: 10.1016/J.Neuroscience.2020.06.030  0.826
2020 Scholl LR, Foik AT, Lyon DC. Projections between visual cortex and pulvinar in the rat. The Journal of Comparative Neurology. PMID 32361987 DOI: 10.1002/Cne.24937  0.83
2018 Foik AT, Lean GA, Scholl LR, McLelland BT, Mathur A, Aramant RB, Seiler MJ, Lyon DC. Detailed visual cortical responses generated by retinal sheet transplants in rats with severe retinal degeneration. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. PMID 30396913 DOI: 10.1523/Jneurosci.1279-18.2018  0.785
2018 Lean GA, Liu YJ, Lyon DC. Cell type specific tracing of the subcortical input to primary visual cortex from the basal forebrain. The Journal of Comparative Neurology. PMID 29441578 DOI: 10.1002/Cne.24412  0.687
2017 Liu YJ, Hashemi-Nezhad M, Lyon DC. Differences in orientation tuning between pinwheel and domain neurons in primary visual cortex depend on contrast and size. Neurophotonics. 4: 031209. PMID 28523280 DOI: 10.1117/1.Nph.4.3.031209  0.818
2017 Negwer M, Liu YJ, Schubert D, Lyon DC. V1 connections reveal a series of elongated higher visual areas in the California ground squirrel, Otospermophilus beecheyi. The Journal of Comparative Neurology. PMID 28078786 DOI: 10.1002/Cne.24173  0.731
2015 Kaas JH, Roe AW, Baldwin MK, Lyon DC. Resolving the organization of the territory of the third visual area: A new proposal. Visual Neuroscience. 32: E016. PMID 26241553 DOI: 10.1017/S0952523815000152  0.857
2015 Liu YJ, Hashemi-Nezhad M, Lyon DC. Contrast invariance of orientation tuning in cat primary visual cortex neurons depends on stimulus size. The Journal of Physiology. PMID 26227285 DOI: 10.1113/Jp271180  0.827
2014 Liu YJ, Arreola M, Coleman CM, Lyon DC. Very-long-range disynaptic V1 connections through layer 6 pyramidal neurons revealed by transneuronal tracing with rabies virus. Eye and Brain. 6: 45-56. PMID 28539788 DOI: 10.2147/EB.S51818  0.804
2014 Cerkevich CM, Lyon DC, Balaram P, Kaas JH. Distribution of cortical neurons projecting to the superior colliculus in macaque monkeys. Eye and Brain. 2014: 121-137. PMID 25663799 DOI: 10.2147/EB.S53613  0.842
2014 Liu YJ, Arreola M, Coleman CM, Lyon DC. Very-long-range disynaptic V1 connections through layer 6 pyramidal neurons revealed by transneuronal tracing with rabies virus Eye and Brain. 6: 45-56. DOI: 10.2147/EB.S51818  0.803
2013 Liu YJ, Ehrengruber MU, Negwer M, Shao HJ, Cetin AH, Lyon DC. Tracing inputs to inhibitory or excitatory neurons of mouse and cat visual cortex with a targeted rabies virus. Current Biology : Cb. 23: 1746-55. PMID 23993841 DOI: 10.1016/J.Cub.2013.07.033  0.71
2013 Liu YJ, Hashemi-Nezhad M, Lyon DC. Sharper orientation tuning of the extraclassical suppressive-surround due to a neuron's location in the V1 orientation map emerges late in time. Neuroscience. 229: 100-17. PMID 23159311 DOI: 10.1016/j.neuroscience.2012.10.071  0.829
2013 Lyon D, Liu Y, Negwer M, Shao H, Ehrengruber M. Investigating Inhibitory Circuits of Visual Cortex Journal of Vision. 13: 1262-1262. DOI: 10.1167/13.9.1262  0.69
2013 Lyon DC. The case for a dorsal V3 in the 'third-tier' of primate visual cortex: A reply to 'the case for a dorsomedial area in the primate 'third-tier' visual cortex' Proceedings of the Royal Society B: Biological Sciences. 280. DOI: 10.1098/rspb.2012.1994  0.594
2012 Lyon DC, Rabideau C. Lack of robust LGN label following transneuronal rabies virus injections into macaque area V4. The Journal of Comparative Neurology. 520: 2500-11. PMID 22237967 DOI: 10.1002/cne.23050  0.594
2012 Lyon DC, Connolly JD. The case for primate V3. Proceedings. Biological Sciences / the Royal Society. 279: 625-33. PMID 22171081 DOI: 10.1098/rspb.2011.2048  0.827
2012 Connolly JD, Hashemi-Nezhad M, Lyon DC. Parallel feedback pathways in visual cortex of cats revealed through a modified rabies virus. The Journal of Comparative Neurology. 520: 988-1004. PMID 21826663 DOI: 10.1002/cne.22748  0.842
2012 Hashemi-Nezhad M, Lyon DC. Orientation tuning of the suppressive extraclassical surround depends on intrinsic organization of V1. Cerebral Cortex (New York, N.Y. : 1991). 22: 308-26. PMID 21666124 DOI: 10.1093/cercor/bhr105  0.836
2011 Liu YJ, Hashemi-Nezhad M, Lyon DC. Dynamics of extraclassical surround modulation in three types of V1 neurons. Journal of Neurophysiology. 105: 1306-17. PMID 21228302 DOI: 10.1152/Jn.00692.2010  0.809
2010 Lyon DC, Nassi JJ, Callaway EM. A disynaptic relay from superior colliculus to dorsal stream visual cortex in macaque monkey. Neuron. 65: 270-9. PMID 20152132 DOI: 10.1016/j.neuron.2010.01.003  0.869
2010 Qi HX, Jain N, Collins CE, Lyon DC, Kaas JH. Functional organization of motor cortex of adult macaque monkeys is altered by sensory loss in infancy. Proceedings of the National Academy of Sciences of the United States of America. 107: 3192-7. PMID 20133738 DOI: 10.1073/Pnas.0914962107  0.739
2010 Lyon DC, Nassi JJ, Callaway EM. Disynaptic connections from the superior colliculus to cortical area MT revealed through transynaptic labeling with rabies virus Journal of Vision. 5: 432-432. DOI: 10.1167/5.8.432  0.806
2010 Lyon DC. The evolution of visual cortex and visual systems Evolution of Nervous Systems. 3: 267-306. DOI: 10.1016/B0-12-370878-8/00075-6  0.459
2009 Stimberg M, Wimmer K, Martin R, Schwabe L, Mariño J, Schummers J, Lyon DC, Sur M, Obermayer K. The operating regime of local computations in primary visual cortex. Cerebral Cortex (New York, N.Y. : 1991). 19: 2166-80. PMID 19221143 DOI: 10.1093/Cercor/Bhn240  0.706
2009 Wimmer K, Stimberg M, Martin R, Schwabe L, Mariño J, Schummers J, Lyon DC, Sur M, Obermayer K. Dependence of orientation tuning on recurrent excitation and inhibition in a network model of V1 Advances in Neural Information Processing Systems 21 - Proceedings of the 2008 Conference. 1769-1776.  0.583
2007 Kaas JH, Lyon DC. Pulvinar contributions to the dorsal and ventral streams of visual processing in primates. Brain Research Reviews. 55: 285-96. PMID 17433837 DOI: 10.1016/j.brainresrev.2007.02.008  0.76
2007 Wickersham IR, Lyon DC, Barnard RJ, Mori T, Finke S, Conzelmann KK, Young JA, Callaway EM. Monosynaptic restriction of transsynaptic tracing from single, genetically targeted neurons. Neuron. 53: 639-47. PMID 17329205 DOI: 10.1016/J.Neuron.2007.01.033  0.775
2007 Remple MS, Reed JL, Stepniewska I, Lyon DC, Kaas JH. The organization of frontoparietal cortex in the tree shrew (Tupaia belangeri): II. Connectional evidence for a frontal-posterior parietal network. The Journal of Comparative Neurology. 501: 121-49. PMID 17206607 DOI: 10.1002/Cne.21226  0.799
2006 Nassi JJ, Lyon DC, Callaway EM. The parvocellular LGN provides a robust disynaptic input to the visual motion area MT. Neuron. 50: 319-27. PMID 16630841 DOI: 10.1016/j.neuron.2006.03.019  0.84
2005 Collins CE, Lyon DC, Kaas JH. Distribution across cortical areas of neurons projecting to the superior colliculus in new world monkeys. The Anatomical Record. Part a, Discoveries in Molecular, Cellular, and Evolutionary Biology. 285: 619-27. PMID 15912524 DOI: 10.1002/ar.a.20207  0.834
2005 Mariño J, Schummers J, Lyon DC, Schwabe L, Beck O, Wiesing P, Obermayer K, Sur M. Invariant computations in local cortical networks with balanced excitation and inhibition. Nature Neuroscience. 8: 194-201. PMID 15665876 DOI: 10.1038/Nn1391  0.726
2004 Lyon DC, Sharma J, Schummers J, Sur M. Non Linear Modulation of Contextual Influences by Attention in Awake Monkey V1 Journal of Vision. 4: 620-620. DOI: 10.1167/4.8.620  0.653
2003 Lyon DC, Jain N, Kaas JH. The visual pulvinar in tree shrews II. Projections of four nuclei to areas of visual cortex. The Journal of Comparative Neurology. 467: 607-27. PMID 14624492 DOI: 10.1002/Cne.10940  0.779
2003 Lyon DC, Jain N, Kaas JH. The visual pulvinar in tree shrews I. Multiple subdivisions revealed through acetylcholinesterase and Cat-301 chemoarchitecture. The Journal of Comparative Neurology. 467: 593-606. PMID 14624491 DOI: 10.1002/Cne.10939  0.73
2003 Collins CE, Lyon DC, Kaas JH. Responses of neurons in the middle temporal visual area after long-standing lesions of the primary visual cortex in adult new world monkeys. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 23: 2251-64. PMID 12657684 DOI: 10.1523/Jneurosci.23-06-02251.2003  0.819
2002 Lyon DC, Xu X, Casagrande VA, Stefansic JD, Shima D, Kaas JH. Optical imaging reveals retinotopic organization of dorsal V3 in New World owl monkeys. Proceedings of the National Academy of Sciences of the United States of America. 99: 15735-42. PMID 12441399 DOI: 10.1073/pnas.242600699  0.806
2002 Lyon DC, Kaas JH. Connectional evidence for dorsal and ventral V3, and other extrastriate areas in the prosimian primate, Galago garnetti. Brain, Behavior and Evolution. 59: 114-29. PMID 12119531 DOI: 10.1159/000064159  0.747
2002 Lyon DC, Kaas JH. Evidence from V1 connections for both dorsal and ventral subdivisions of V3 in three species of New World monkeys. The Journal of Comparative Neurology. 449: 281-97. PMID 12115680 DOI: 10.1002/cne.10297  0.761
2002 Lyon DC, Kaas JH. Evidence for a modified V3 with dorsal and ventral halves in macaque monkeys. Neuron. 33: 453-61. PMID 11832231 DOI: 10.1016/S0896-6273(02)00580-9  0.731
2002 Qi HX, Lyon DC, Kaas JH. Cortical and thalamic connections of the parietal ventral somatosensory area in marmoset monkeys (Callithrix jacchus). The Journal of Comparative Neurology. 443: 168-82. PMID 11793354 DOI: 10.1002/cne.10113  0.717
2002 Lyon DC, Kaas JH. Evidence for a complete V3 in a wide range of primate species Journal of Vision. 2: 423a. DOI: 10.1167/2.7.423  0.601
2001 Kaas JH, Lyon DC. Visual cortex organization in primates: theories of V3 and adjoining visual areas. Progress in Brain Research. 134: 285-95. PMID 11702549 DOI: 10.1016/S0079-6123(01)34019-0  0.751
2001 Lyon DC, Kaas JH. Connectional and architectonic evidence for dorsal and ventral V3, and dorsomedial area in marmoset monkeys. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 21: 249-61. PMID 11150342 DOI: 10.1523/Jneurosci.21-01-00249.2001  0.737
2001 Lyon D, Kaas J. Evidence from V1 connections for both ventral and dorsal V3 in macaques Journal of Vision. 1: 447a. DOI: 10.1167/1.3.447  0.68
1999 Catania KC, Lyon DC, Mock OB, Kaas JH. Cortical organization in shrews: evidence from five species. The Journal of Comparative Neurology. 410: 55-72. PMID 10397395 DOI: 10.1002/(Sici)1096-9861(19990719)410:1<55::Aid-Cne6>3.0.Co;2-2  0.791
1998 Lyon DC, Jain N, Kaas JH. Cortical connections of striate and extrastriate visual areas in tree shrews. The Journal of Comparative Neurology. 401: 109-28. PMID 9802703 DOI: 10.1002/(Sici)1096-9861(19981109)401:1<109::Aid-Cne7>3.0.Co;2-I  0.783
Low-probability matches (unlikely to be authored by this person)
2022 Lewandowski D, Foik AT, Smidak R, Choi EH, Zhang J, Hoang T, Tworak A, Suh S, Leinonen H, Dong Z, Pinto AF, Tom E, Luu JC, Lee JY, Ma X, ... ... Lyon DC, et al. Inhibition of ceramide accumulation in AdipoR1-/- mice increases photoreceptor survival and improves vision. Jci Insight. PMID 35015730 DOI: 10.1172/jci.insight.156301  0.21
2020 Suh S, Choi EH, Leinonen H, Foik AT, Newby GA, Yeh WH, Dong Z, Kiser PD, Lyon DC, Liu DR, Palczewski K. Publisher Correction: Restoration of visual function in adult mice with an inherited retinal disease via adenine base editing. Nature Biomedical Engineering. PMID 33122854 DOI: 10.1038/s41551-020-00652-2  0.201
2012 Lyon DC. Morphological approaches to the anatomical dissection of neuronal circuits Neuromethods. 67: 375-389. DOI: 10.1007/7657_2011_12  0.194
2022 Choi EH, Suh S, Foik AT, Leinonen H, Newby GA, Gao XD, Banskota S, Hoang T, Du SW, Dong Z, Raguram A, Kohli S, Blackshaw S, Lyon DC, Liu DR, et al. In vivo base editing rescues cone photoreceptors in a mouse model of early-onset inherited retinal degeneration. Nature Communications. 13: 1830. PMID 35383196 DOI: 10.1038/s41467-022-29490-3  0.185
2020 Suh S, Choi EH, Leinonen H, Foik AT, Newby GA, Yeh WH, Dong Z, Kiser PD, Lyon DC, Liu DR, Palczewski K. Restoration of visual function in adult mice with an inherited retinal disease via adenine base editing. Nature Biomedical Engineering. PMID 33077938 DOI: 10.1038/s41551-020-00632-6  0.154
2022 Frankowski JC, Tierno A, Pavani S, Cao Q, Lyon DC, Hunt RF. Brain-wide reconstruction of inhibitory circuits after traumatic brain injury. Nature Communications. 13: 3417. PMID 35701434 DOI: 10.1038/s41467-022-31072-2  0.14
2018 Szklarczyk D, Gable AL, Lyon D, Junge A, Wyder S, Huerta-Cepas J, Simonovic M, Doncheva NT, Morris JH, Bork P, Jensen LJ, von Mering C. STRING v11: protein-protein association networks with increased coverage, supporting functional discovery in genome-wide experimental datasets. Nucleic Acids Research. PMID 30476243 DOI: 10.1093/Nar/Gky1131  0.133
2019 Schmitt J, Downey B, Beller J, Russell B, Quach A, Breit J, Lyon D, Curran M, Mulukutla BC, Chu C. Corrigendum. Biotechnology and Bioengineering. 116: 3482. PMID 31693186 DOI: 10.1002/bit.27155  0.12
2014 Doerfler H, Sun X, Wang L, Engelmeier D, Lyon D, Weckwerth W. mzGroupAnalyzer--predicting pathways and novel chemical structures from untargeted high-throughput metabolomics data. Plos One. 9: e96188. PMID 24846183 DOI: 10.1371/journal.pone.0096188  0.113
2022 Morales N, Ogbonna AC, Ellerbrock BJ, Bauchet GJ, Tantikanjana T, Tecle IY, Powell AF, Lyon D, Menda N, Simoes CC, Saha S, Hosmani P, Flores M, Panitz N, Preble RS, et al. Breedbase: a digital ecosystem for modern plant breeding. G3 (Bethesda, Md.). PMID 35385099 DOI: 10.1093/g3journal/jkac078  0.097
2018 Mackie M, Rüther P, Samodova D, Di Gianvincenzo F, Granzotto C, Lyon D, Peggie DA, Howard H, Harrison L, Jensen LJ, Olsen JV, Cappellini E. Palaeoproteomic Profiling of Conservation Layers on a 14th Century Italian Wall Painting. Angewandte Chemie (International Ed. in English). PMID 29603563 DOI: 10.1002/Anie.201713020  0.096
1969 Lyon DC. Primary pneumaturia. The British Journal of Surgery. 56: 315-6. PMID 4952908  0.093
2018 Hendriks IA, Lyon D, Su D, Skotte NH, Daniel JA, Jensen LJ, Nielsen ML. Site-specific characterization of endogenous SUMOylation across species and organs. Nature Communications. 9: 2456. PMID 29942033 DOI: 10.1038/s41467-018-04957-4  0.089
2022 Gable AL, Szklarczyk D, Lyon D, Matias Rodrigues JF, von Mering C. Systematic assessment of pathway databases, based on a diverse collection of user-submitted experiments. Briefings in Bioinformatics. 23. PMID 36088548 DOI: 10.1093/bib/bbac355  0.089
2015 Gil-Quintana E, Lyon D, Staudinger C, Wienkoop S, González EM. Medicago truncatula and Glycine max: Different Drought Tolerance and Similar Local Response of the Root Nodule Proteome. Journal of Proteome Research. 14: 5240-51. PMID 26503705 DOI: 10.1021/acs.jproteome.5b00617  0.081
2019 Cappellini E, Welker F, Pandolfi L, Ramos-Madrigal J, Samodova D, Rüther PL, Fotakis AK, Lyon D, Moreno-Mayar JV, Bukhsianidze M, Rakownikow Jersie-Christensen R, Mackie M, Ginolhac A, Ferring R, Tappen M, et al. Early Pleistocene enamel proteome from Dmanisi resolves Stephanorhinus phylogeny. Nature. PMID 31511700 DOI: 10.1038/S41586-019-1555-Y  0.078
2012 Doerfler H, Lyon D, Nägele T, Sun X, Fragner L, Hadacek F, Egelhofer V, Weckwerth W. Granger causality in integrated GC-MS and LC-MS metabolomics data reveals the interface of primary and secondary metabolism. Metabolomics : Official Journal of the Metabolomic Society. 9: 564-574. PMID 23678342 DOI: 10.1007/s11306-012-0470-0  0.069
2018 Jersie-Christensen RR, Lanigan LT, Lyon D, Mackie M, Belstrøm D, Kelstrup CD, Fotakis AK, Willerslev E, Lynnerup N, Jensen LJ, Cappellini E, Olsen JV. Quantitative metaproteomics of medieval dental calculus reveals individual oral health status. Nature Communications. 9: 4744. PMID 30459334 DOI: 10.1038/s41467-018-07148-3  0.068
2017 Hendriks IA, Lyon D, Young C, Jensen LJ, Vertegaal AC, Nielsen ML. Site-specific mapping of the human SUMO proteome reveals co-modification with phosphorylation. Nature Structural & Molecular Biology. PMID 28112733 DOI: 10.1038/Nsmb.3366  0.066
2016 Larsen SC, Sylvestersen KB, Mund A, Lyon D, Mullari M, Madsen MV, Daniel JA, Jensen LJ, Nielsen ML. Proteome-wide analysis of arginine monomethylation reveals widespread occurrence in human cells. Science Signaling. 9: rs9. PMID 27577262 DOI: 10.1126/scisignal.aaf7329  0.065
2018 Larsen SC, Hendriks IA, Lyon D, Jensen LJ, Nielsen ML. Systems-wide Analysis of Serine ADP-Ribosylation Reveals Widespread Occurrence and Site-Specific Overlap with Phosphorylation. Cell Reports. 24: 2493-2505.e4. PMID 30157440 DOI: 10.1016/j.celrep.2018.07.083  0.064
2020 Szklarczyk D, Gable AL, Nastou KC, Lyon D, Kirsch R, Pyysalo S, Doncheva NT, Legeay M, Fang T, Bork P, Jensen LJ, von Mering C. The STRING database in 2021: customizable protein-protein networks, and functional characterization of user-uploaded gene/measurement sets. Nucleic Acids Research. PMID 33237311 DOI: 10.1093/nar/gkaa1074  0.059
2019 Schmitt J, Downey B, Beller J, Russell B, Quach A, Lyon D, Curran M, Mulukutla BC, Chu C. Forecasting and Control of Lactate Bifurcation in Chinese Hamster Ovary Cell Culture Processes. Biotechnology and Bioengineering. PMID 31062870 DOI: 10.1002/Bit.27015  0.059
2020 Robertson AM, Edie R, Field RA, Lyon D, McVay R, Omara M, Zavala-Araiza D, Murphy SM. New Mexico Permian Basin Measured Well Pad Methane Emissions Are a Factor of 5-9 Times Higher Than U.S. EPA Estimates. Environmental Science & Technology. PMID 33058723 DOI: 10.1021/acs.est.0c02927  0.057
2013 Ischebeck T, Valledor L, Lyon D, Gingl S, Nagler M, Meijón M, Egelhofer V, Weckwerth W. Comprehensive cell-specific protein analysis in early and late pollen development from diploid microsporocytes to pollen tube growth. Molecular & Cellular Proteomics : McP. 13: 295-310. PMID 24078888 DOI: 10.1074/mcp.M113.028100  0.056
2007 Lyon DC. Sticks and stones [3] Forbes. 180: 16.  0.054
2017 Weinert BT, Satpathy S, Hansen BK, Lyon D, Jensen LJ, Choudhary C. Accurate quantification of site-specific acetylation stoichiometry reveals the impact of sirtuin deacetylase CobB on the E. coli acetylome. Molecular & Cellular Proteomics : McP. PMID 28254776 DOI: 10.1074/Mcp.M117.067587  0.054
2015 Yacovitch TI, Herndon SC, Pétron G, Kofler J, Lyon D, Zahniser MS, Kolb CE. Mobile Laboratory Observations of Methane Emissions in the Barnett Shale Region. Environmental Science & Technology. 49: 7889-95. PMID 25751617 DOI: 10.1021/es506352j  0.054
2012 Mari A, Lyon D, Fragner L, Montoro P, Piacente S, Wienkoop S, Egelhofer V, Weckwerth W. Phytochemical composition of L. analyzed by an integrative GC-MS and LC-MS metabolomics platform. Metabolomics : Official Journal of the Metabolomic Society. 9: 599-607. PMID 23678344 DOI: 10.1007/s11306-012-0473-x  0.052
2014 Lyon D, Castillejo MA, Staudinger C, Weckwerth W, Wienkoop S, Egelhofer V. Automated protein turnover calculations from 15N partial metabolic labeling LC/MS shotgun proteomics data. Plos One. 9: e94692. PMID 24736476 DOI: 10.1371/journal.pone.0094692  0.051
2009 Lyon D. Biometrics, identification and surveillance. Bioethics. 22: 499-508. PMID 18959732 DOI: 10.1111/j.1467-8519.2008.00697.x  0.049
2013 Egelhofer V, Hoehenwarter W, Lyon D, Weckwerth W, Wienkoop S. Using ProtMAX to create high-mass-accuracy precursor alignments from label-free quantitative mass spectrometry data generated in shotgun proteomics experiments. Nature Protocols. 8: 595-601. PMID 23449253 DOI: 10.1038/nprot.2013.013  0.049
2019 Hansen BK, Gupta R, Baldus L, Lyon D, Narita T, Lammers M, Choudhary C, Weinert BT. Analysis of human acetylation stoichiometry defines mechanistic constraints on protein regulation. Nature Communications. 10: 1055. PMID 30837475 DOI: 10.1038/S41467-019-09024-0  0.047
2016 Belstrøm D, Jersie-Christensen RR, Lyon D, Damgaard C, Jensen LJ, Holmstrup P, Olsen JV. Metaproteomics of saliva identifies human protein markers specific for individuals with periodontitis and dental caries compared to orally healthy controls. Peerj. 4: e2433. PMID 27672500 DOI: 10.7717/Peerj.2433  0.047
2016 Lyon D, Castillejo MA, Mehmeti-Tershani V, Staudinger C, Kleemaier C, Wienkoop S. Drought and Recovery: Independently Regulated Processes Highlighting the Importance of Protein Turnover Dynamics and Translational Regulation in Medicago truncatula. Molecular & Cellular Proteomics : McP. 15: 1921-37. PMID 27001437 DOI: 10.1074/mcp.M115.049205  0.046
2016 Turetschek R, Lyon D, Desalegn G, Kaul HP, Wienkoop S. A Proteomic Workflow Using High-Throughput De Novo Sequencing Towards Complementation of Genome Information for Improved Comparative Crop Science. Methods in Molecular Biology (Clifton, N.J.). 1394: 233-43. PMID 26700053 DOI: 10.1007/978-1-4939-3341-9_17  0.046
2022 Xu Q, Rydz C, Nguyen Huu VA, Rocha L, Palomino La Torre C, Lee I, Cho W, Jabari M, Donello J, Lyon DC, Brooke RT, Horvath S, Weinreb RN, Ju WK, Foik A, et al. Stress induced aging in mouse eye. Aging Cell. e13737. PMID 36397653 DOI: 10.1111/acel.13737  0.046
2017 Mullari M, Lyon D, Jensen LJ, Nielsen ML. Specifying RNA-binding regions in proteins by peptide Cross-Linking and Affinity Purification. Journal of Proteome Research. PMID 28648085 DOI: 10.1021/Acs.Jproteome.7B00042  0.045
2015 Zavala-Araiza D, Lyon D, Alvarez RA, Palacios V, Harriss R, Lan X, Talbot R, Hamburg SP. Toward a Functional Definition of Methane Super-Emitters: Application to Natural Gas Production Sites Environmental Science and Technology. 49: 8167-8174. PMID 26148555 DOI: 10.1021/acs.est.5b00133  0.044
2019 Abbeloos R, Backlund JE, Basterrechea Salido M, Bauchet G, Benites-Alfaro O, Birkett C, Calaminos VC, Carceller P, Cornut G, Vasques Costa B, Edwards JD, Finkers R, Gao SY, Ghaffar M, Glaser P, ... ... Lyon D, et al. BrAPI - an Application Programming Interface for Plant Breeding Applications. Bioinformatics (Oxford, England). PMID 30903186 DOI: 10.1093/Bioinformatics/Btz190  0.043
2020 Arnaud E, Laporte MA, Kim S, Aubert C, Leonelli S, Miro B, Cooper L, Jaiswal P, Kruseman G, Shrestha R, Buttigieg PL, Mungall CJ, Pietragalla J, Agbona A, Muliro J, ... ... Lyon D, et al. The Ontologies Community of Practice: A CGIAR Initiative for Big Data in Agrifood Systems. Patterns (New York, N.Y.). 1: 100105. PMID 33205138 DOI: 10.1016/j.patter.2020.100105  0.043
2016 Ghatak A, Chaturvedi P, Nagler M, Roustan V, Lyon D, Bachmann G, Postl W, Schröfl A, Desai N, Varshney RK, Weckwerth W. Comprehensive tissue-specific proteome analysis of drought stress responses in Pennisetum glaucum (L.) R. Br. (Pearl millet). Journal of Proteomics. PMID 26944736 DOI: 10.1016/j.jprot.2016.02.032  0.043
2017 Downey B, Schmitt J, Beller J, Russell B, Quach A, Hermann E, Lyon D, Breit J. A System Identification Approach for Developing Model Predictive Controllers of Antibody Quality Attributes in Cell Culture Processes. Biotechnology Progress. PMID 28786215 DOI: 10.1002/Btpr.2537  0.043
2014 Lyon D, Weckwerth W, Wienkoop S. Mass Western for absolute quantification of target proteins and considerations about the instrument of choice. Methods in Molecular Biology (Clifton, N.J.). 1072: 199-208. PMID 24136524 DOI: 10.1007/978-1-62703-631-3_15  0.042
2020 Zhang Y, Gautam R, Pandey S, Omara M, Maasakkers JD, Sadavarte P, Lyon D, Nesser H, Sulprizio MP, Varon DJ, Zhang R, Houweling S, Zavala-Araiza D, Alvarez RA, Lorente A, et al. Quantifying methane emissions from the largest oil-producing basin in the United States from space. Science Advances. 6: eaaz5120. PMID 32494644 DOI: 10.1126/Sciadv.Aaz5120  0.042
2015 Karion A, Sweeney C, Kort EA, Shepson PB, Brewer A, Cambaliza M, Conley SA, Davis K, Deng A, Hardesty M, Herndon SC, Lauvaux T, Lavoie T, Lyon D, Newberger T, et al. Aircraft-Based Estimate of Total Methane Emissions from the Barnett Shale Region. Environmental Science & Technology. 49: 8124-31. PMID 26148550 DOI: 10.1021/Acs.Est.5B00217  0.039
2015 Ballas SK, Lyon D. Safety and efficacy of blood exchange transfusion for priapism complicating sickle cell disease. Journal of Clinical Apheresis. 31: 5-10. PMID 25809639 DOI: 10.1002/jca.21394  0.039
2021 Rutherford JS, Sherwin ED, Ravikumar AP, Heath GA, Englander J, Cooley D, Lyon D, Omara M, Langfitt Q, Brandt AR. Closing the methane gap in US oil and natural gas production emissions inventories. Nature Communications. 12: 4715. PMID 34354066 DOI: 10.1038/s41467-021-25017-4  0.035
2014 Brantley HL, Thoma ED, Squier WC, Guven BB, Lyon D. Assessment of methane emissions from oil and gas production pads using mobile measurements. Environmental Science & Technology. 48: 14508-15. PMID 25375308 DOI: 10.1021/es503070q  0.035
2016 Meisrimler CN, Wienkoop S, Lyon D, Geilfus CM, Lüthje S. Long-term iron deficiency: Tracing changes in the proteome of different pea (Pisum sativum L.) cultivars. Journal of Proteomics. 140: 13-23. PMID 27012544 DOI: 10.1016/j.jprot.2016.03.024  0.034
2022 Powell AF, Feder A, Li J, Schmidt MH, Courtney L, Alseekh S, Jobson EM, Vogel A, Xu Y, Lyon D, Dumschott K, McHale M, Sulpice R, Bao K, Lal R, et al. A Solanum lycopersicoides reference genome facilitates insights into tomato specialized metabolism and immunity. The Plant Journal : For Cell and Molecular Biology. PMID 35411592 DOI: 10.1111/tpj.15770  0.032
2017 Lavoie TN, Shepson PB, Cambaliza MOL, Stirm BH, Conley S, Mehrotra S, Faloona IC, Lyon D. Spatiotemporal Variability of Methane Emissions at Oil and Natural Gas Operations in the Eagle Ford Basin. Environmental Science & Technology. PMID 28678487 DOI: 10.1021/Acs.Est.7B00814  0.031
2021 Szklarczyk D, Gable AL, Nastou KC, Lyon D, Kirsch R, Pyysalo S, Doncheva NT, Legeay M, Fang T, Bork P, Jensen LJ, von Mering C. Correction to 'The STRING database in 2021: customizable protein-protein networks, and functional characterization of user-uploaded gene/measurement sets'. Nucleic Acids Research. PMID 34530444 DOI: 10.1093/nar/gkab835  0.03
2015 Schölz C, Lyon D, Refsgaard JC, Jensen LJ, Choudhary C, Weinert BT. Avoiding abundance bias in the functional annotation of posttranslationally modified proteins. Nature Methods. 12: 1003-4. PMID 26513550 DOI: 10.1038/Nmeth.3621  0.03
2015 Recuenco-Muñoz L, Offre P, Valledor L, Lyon D, Weckwerth W, Wienkoop S. Targeted quantitative analysis of a diurnal RuBisCO subunit expression and translation profile in Chlamydomonas reinhardtii introducing a novel Mass Western approach. Journal of Proteomics. 113: 143-53. PMID 25301535 DOI: 10.1016/j.jprot.2014.09.026  0.029
2012 Staudinger C, Mehmeti V, Turetschek R, Lyon D, Egelhofer V, Wienkoop S. Possible Role of Nutritional Priming for Early Salt and Drought Stress Responses in Medicago truncatula. Frontiers in Plant Science. 3: 285. PMID 23267362 DOI: 10.3389/fpls.2012.00285  0.029
2015 Harriss R, Alvarez RA, Lyon D, Zavala-Araiza D, Nelson D, Hamburg SP. Using Multi-Scale Measurements to Improve Methane Emission Estimates from Oil and Gas Operations in the Barnett Shale Region, Texas. Environmental Science & Technology. 49: 7524-6. PMID 26148548 DOI: 10.1021/acs.est.5b02305  0.029
2002 Lyon D. Cancer services. Appraising grace. The Health Service Journal. 112: 26-7. PMID 12138743  0.028
2007 Howard L, Ashley C, Lyon D, Shenkin A. Autopsy tissue trace elements in 8 long-term parenteral nutrition patients who received the current U.S. Food and Drug Administration formulation. Jpen. Journal of Parenteral and Enteral Nutrition. 31: 388-96. PMID 17712147  0.025
2008 Lyon DC, Lagowski JJ. Effectiveness of facilitating small-group learning in large lecture classes. A general chemistry case study Journal of Chemical Education. 85: 1571-1576.  0.024
2007 Lyon D, Chellaswamy H. Admissions. EARLI impact on acute admissions. The Health Service Journal. 117: 24-5. PMID 17444445  0.023
2015 Lavoie TN, Shepson PB, Cambaliza MO, Stirm BH, Karion A, Sweeney C, Yacovitch TI, Herndon SC, Lan X, Lyon D. Aircraft-Based Measurements of Point Source Methane Emissions in the Barnett Shale Basin. Environmental Science & Technology. 49: 7904-13. PMID 26148549 DOI: 10.1021/Acs.Est.5B00410  0.019
2017 Lavoie TN, Shepson PB, Gore CA, Stirm BH, Kaeser R, Wulle B, Lyon D, Rudek J. Correction to Assessing the Methane Emissions from Natural Gas-Fired Power Plants and Oil Refineries. Environmental Science & Technology. PMID 28441002 DOI: 10.1021/Acs.Est.7B01742  0.017
1969 Nardi GL, Lyon DC, Sheiner HJ, Bartlett MK. Solitary occult retention cysts of the pancreas. The New England Journal of Medicine. 280: 11-5. PMID 5761702 DOI: 10.1056/NEJM196901022800103  0.013
2007 Lancaster GA, Chellaswamy H, Taylor S, Lyon D, Dowrick C. Design of a clustered observational study to predict emergency admissions in the elderly: statistical reasoning in clinical practice. Journal of Evaluation in Clinical Practice. 13: 169-78. PMID 17378861 DOI: 10.1111/j.1365-2753.2006.00663.x  0.011
2010 Kuehl PJ, Barrett EG, McDonald JD, Rudolph K, Vodak D, Dobry D, Lyon D. Formulation development and in vivo evaluation of a new dry powder formulation of albuterol sulphate in beagle dogs. Pharmaceutical Research. 27: 894-904. PMID 20232119 DOI: 10.1007/S11095-010-0084-Z  0.01
2007 Lyon D, Lancaster GA, Taylor S, Dowrick C, Chellaswamy H. Predicting the likelihood of emergency admission to hospital of older people: development and validation of the Emergency Admission Risk Likelihood Index (EARLI). Family Practice. 24: 158-67. PMID 17210987 DOI: 10.1093/fampra/cml069  0.01
2001 Lyon DC, Hsu MY, Colombe BW, Ballas SK. False-positive HLA antibody screen associated with Campath administration. Transfusion. 41: 1626-8. PMID 11778083 DOI: 10.1046/j.1537-2995.2001.41121626.x  0.01
1986 Davies DI, Lyon DC, Spring RJ. Charles Loudon Bloxam--a Victorian university and military academy chemistry teacher. Ambix. 33: 11-32. PMID 11616062 DOI: 10.1179/amb.1986.33.1.11  0.01
1969 Lyon DC, Sheiner HJ. Idiopathic rectosigmoid perforation. Surgery, Gynecology & Obstetrics. 128: 991-1000. PMID 5779745  0.01
1969 Lyon DC. Recurrent pancreatitis caused by peptic ulceration in an intra-pancreatic gastrireduplication cyst. The British Journal of Clinical Practice. 23: 425-7. PMID 5346402  0.01
1968 Lyon DC. Intussusception complicating anticoagulant therapy. British Medical Journal. 2: 345. PMID 5300872 DOI: 10.1136/bmj.2.5601.345  0.01
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