John David Murray, Ph.D. - Publications

Affiliations: 
2015- Psychiatry Yale University School of Medicine, New Haven, CT 
Area:
computational neuroscience, computational psychiatry
Website:
http://johndmurray.org/

68 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any innacuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2019 Fulcher BD, Murray JD, Zerbi V, Wang XJ. Multimodal gradients across mouse cortex. Proceedings of the National Academy of Sciences of the United States of America. PMID 30782826 DOI: 10.1073/pnas.1814144116  0.84
2019 Demirtaş M, Burt JB, Helmer M, Ji JL, Adkinson BD, Glasser MF, Van Essen DC, Sotiropoulos SN, Anticevic A, Murray JD. Hierarchical Heterogeneity across Human Cortex Shapes Large-Scale Neural Dynamics. Neuron. PMID 30744986 DOI: 10.1016/j.neuron.2019.01.017  0.56
2018 Preller KH, Burt JB, Ji JL, Schleifer CH, Adkinson BD, Stämpfli P, Seifritz E, Repovs G, Krystal JH, Murray JD, Vollenweider FX, Anticevic A. Changes in global and thalamic brain connectivity in LSD-induced altered states of consciousness are attributable to the 5-HT2A receptor. Elife. 7. PMID 30355445 DOI: 10.7554/eLife.35082  0.56
2018 Cho YT, Lam NH, Starc M, Santamauro N, Savic A, Diehl CK, Schleifer CH, Moujaes F, Srihari VH, Repovs G, Murray JD, Anticevic A. Effects of reward on spatial working memory in schizophrenia. Journal of Abnormal Psychology. 127: 695-709. PMID 30335439 DOI: 10.1037/abn0000369  0.56
2018 Murray JD, Demirtaş M, Anticevic A. Biophysical Modeling of Large-Scale Brain Dynamics and Applications for Computational Psychiatry. Biological Psychiatry. Cognitive Neuroscience and Neuroimaging. PMID 30093344 DOI: 10.1016/j.bpsc.2018.07.004  0.56
2018 Constantinidis C, Funahashi S, Lee D, Murray JD, Qi XL, Wang M, Arnsten AFT. Persistent Spiking Activity Underlies Working Memory. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 38: 7020-7028. PMID 30089641 DOI: 10.1523/JNEUROSCI.2486-17.2018  0.68
2018 Burt JB, Demirtaş M, Eckner WJ, Navejar NM, Ji JL, Martin WJ, Bernacchia A, Anticevic A, Murray JD. Hierarchy of transcriptomic specialization across human cortex captured by structural neuroimaging topography. Nature Neuroscience. PMID 30082915 DOI: 10.1038/s41593-018-0195-0  0.68
2017 Murray JD, Jaramillo J, Wang XJ. Working memory and decision making in a fronto-parietal circuit model. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. PMID 29114071 DOI: 10.1523/JNEUROSCI.0343-17.2017  0.84
2017 Krystal JH, Anticevic A, Yang GJ, Dragoi G, Driesen NR, Wang XJ, Murray JD. Impaired Tuning of Neural Ensembles and the Pathophysiology of Schizophrenia: A Translational and Computational Neuroscience Perspective. Biological Psychiatry. 81: 874-885. PMID 28434616 DOI: 10.1016/j.biopsych.2017.01.004  0.84
2017 Foss-Feig JH, Adkinson BD, Ji JL, Yang G, Srihari VH, McPartland JC, Krystal JH, Murray JD, Anticevic A. Searching for Cross-Diagnostic Convergence: Neural Mechanisms Governing Excitation and Inhibition Balance in Schizophrenia and Autism Spectrum Disorders. Biological Psychiatry. 81: 848-861. PMID 28434615 DOI: 10.1016/j.biopsych.2017.03.005  0.56
2017 Anticevic A, Murray JD. Rebalancing Altered Computations: Considering the Role of Neural Excitation and Inhibition Balance Across the Psychiatric Spectrum. Biological Psychiatry. 81: 816-817. PMID 28434614 DOI: 10.1016/j.biopsych.2017.03.019  0.56
2017 Krystal JH, Murray JD, Chekroud AM, Corlett PR, Yang G, Wang XJ, Anticevic A. Computational Psychiatry and the Challenge of Schizophrenia. Schizophrenia Bulletin. PMID 28338845 DOI: 10.1093/schbul/sbx025  0.84
2016 Mejias JF, Murray JD, Kennedy H, Wang XJ. Feedforward and feedback frequency-dependent interactions in a large-scale laminar network of the primate cortex. Science Advances. 2: e1601335. PMID 28138530 DOI: 10.1126/sciadv.1601335  0.84
2016 Murray JD, Bernacchia A, Roy NA, Constantinidis C, Romo R, Wang XJ. Stable population coding for working memory coexists with heterogeneous neural dynamics in prefrontal cortex. Proceedings of the National Academy of Sciences of the United States of America. PMID 28028221 DOI: 10.1073/pnas.1619449114  0.84
2016 Murray JD, Anticevic A. Toward understanding thalamocortical dysfunction in schizophrenia through computational models of neural circuit dynamics. Schizophrenia Research. PMID 27784534 DOI: 10.1016/j.schres.2016.10.021  0.56
2016 Starc M, Murray JD, Santamauro N, Savic A, Diehl C, Cho YT, Srihari V, Morgan PT, Krystal JH, Wang XJ, Repovs G, Anticevic A. Schizophrenia is associated with a pattern of spatial working memory deficits consistent with cortical disinhibition. Schizophrenia Research. PMID 27745755 DOI: 10.1016/j.schres.2016.10.011  0.84
2016 Yang GJ, Murray JD, Glasser M, Pearlson GD, Krystal JH, Schleifer C, Repovs G, Anticevic A. Altered Global Signal Topography in Schizophrenia. Cerebral Cortex (New York, N.Y. : 1991). PMID 27702810 DOI: 10.1093/cercor/bhw297  0.56
2016 Yang GR, Murray JD, Wang XJ. A dendritic disinhibitory circuit mechanism for pathway-specific gating. Nature Communications. 7: 12815. PMID 27649374 DOI: 10.1038/ncomms12815  0.84
2016 Arnsten AF, Murray JD, Seo H, Lee D. Ketamine's Antidepressant Actions: Potential Mechanisms in the Primate Medial Prefrontal Circuits That Represent Aversive Experience. Biological Psychiatry. 79: 713-5. PMID 27079495 DOI: 10.1016/j.biopsych.2016.02.014  0.36
2015 Yang GJ, Murray JD, Wang XJ, Glahn DC, Pearlson GD, Repovs G, Krystal JH, Anticevic A. Functional hierarchy underlies preferential connectivity disturbances in schizophrenia. Proceedings of the National Academy of Sciences of the United States of America. PMID 26699491 DOI: 10.1073/pnas.1508436113  0.56
2015 Cole MW, Yang GJ, Murray JD, Repovš G, Anticevic A. Functional connectivity change as shared signal dynamics. Journal of Neuroscience Methods. PMID 26642966 DOI: 10.1016/j.jneumeth.2015.11.011  0.56
2015 Horváth B, Domonkos Á, Kereszt A, Szűcs A, Ábrahám E, Ayaydin F, Bóka K, Chen Y, Chen R, Murray JD, Udvardi MK, Kondorosi É, Kaló P. Loss of the nodule-specific cysteine rich peptide, NCR169, abolishes symbiotic nitrogen fixation in the Medicago truncatula dnf7 mutant. Proceedings of the National Academy of Sciences of the United States of America. PMID 26401023 DOI: 10.1073/pnas.1500777112  0.6
2015 Chen DS, Liu CW, Roy S, Cousins D, Stacey N, Murray JD. Identification of a core set of rhizobial infection genes using data from single cell-types. Frontiers in Plant Science. 6: 575. PMID 26284091 DOI: 10.3389/fpls.2015.00575  0.6
2015 Anticevic A, Haut K, Murray JD, Repovs G, Yang GJ, Diehl C, McEwen SC, Bearden CE, Addington J, Goodyear B, Cadenhead KS, Mirzakhanian H, Cornblatt BA, Olvet D, Mathalon DH, et al. Association of Thalamic Dysconnectivity and Conversion to Psychosis in Youth and Young Adults at Elevated Clinical Risk. Jama Psychiatry. PMID 26267151 DOI: 10.1001/jamapsychiatry.2015.0566  0.56
2015 Liu CW, Breakspear A, Roy S, Murray JD. Cytokinin responses counterpoint auxin signaling during rhizobial infection. Plant Signaling & Behavior. 10: e1019982. PMID 26176899 DOI: 10.1080/15592324.2015.1019982  0.6
2015 Anticevic A, Murray JD, Barch DM. Bridging Levels of Understanding in Schizophrenia Through Computational Modeling. Clinical Psychological Science : a Journal of the Association For Psychological Science. 3: 433-459. PMID 25960938 DOI: 10.1177/2167702614562041  0.56
2015 Anticevic A, Hu X, Xiao Y, Hu J, Li F, Bi F, Cole MW, Savic A, Yang GJ, Repovs G, Murray JD, Wang XJ, Huang X, Lui S, Krystal JH, et al. Early-course unmedicated schizophrenia patients exhibit elevated prefrontal connectivity associated with longitudinal change. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 35: 267-86. PMID 25568120 DOI: 10.1523/JNEUROSCI.2310-14.2015  0.56
2015 Anticevic A, Corlett PR, Cole MW, Savic A, Gancsos M, Tang Y, Repovs G, Murray JD, Driesen NR, Morgan PT, Xu K, Wang F, Krystal JH. N-methyl-D-aspartate receptor antagonist effects on prefrontal cortical connectivity better model early than chronic schizophrenia. Biological Psychiatry. 77: 569-80. PMID 25281999 DOI: 10.1016/j.biopsych.2014.07.022  1
2015 Chen DS, Liu CW, Roy S, Cousins D, Stacey N, Murray JD. Identification of a core set of rhizobial infection genes using data from single cell-types Frontiers in Plant Science. 6. DOI: 10.3389/fpls.2015.00575  0.6
2014 Breakspear A, Liu C, Roy S, Stacey N, Rogers C, Trick M, Morieri G, Mysore KS, Wen J, Oldroyd GE, Downie JA, Murray JD. The root hair "infectome" of Medicago truncatula uncovers changes in cell cycle genes and reveals a requirement for Auxin signaling in rhizobial infection. The Plant Cell. 26: 4680-701. PMID 25527707 DOI: 10.1105/tpc.114.133496  0.6
2014 Murray JD, Bernacchia A, Freedman DJ, Romo R, Wallis JD, Cai X, Padoa-Schioppa C, Pasternak T, Seo H, Lee D, Wang XJ. A hierarchy of intrinsic timescales across primate cortex. Nature Neuroscience. 17: 1661-3. PMID 25383900 DOI: 10.1038/nn.3862  0.56
2014 Anticevic A, Yang G, Savic A, Murray JD, Cole MW, Repovs G, Pearlson GD, Glahn DC. Mediodorsal and visual thalamic connectivity differ in schizophrenia and bipolar disorder with and without psychosis history. Schizophrenia Bulletin. 40: 1227-43. PMID 25031221 DOI: 10.1093/schbul/sbu100  0.56
2014 Yang GJ, Murray JD, Repovs G, Cole MW, Savic A, Glasser MF, Pittenger C, Krystal JH, Wang XJ, Pearlson GD, Glahn DC, Anticevic A. Altered global brain signal in schizophrenia. Proceedings of the National Academy of Sciences of the United States of America. 111: 7438-43. PMID 24799682 DOI: 10.1073/pnas.1405289111  0.56
2014 Wang E, Yu N, Bano SA, Liu C, Miller AJ, Cousins D, Zhang X, Ratet P, Tadege M, Mysore KS, Downie JA, Murray JD, Oldroyd GE, Schultze M. A H+-ATPase That Energizes Nutrient Uptake during Mycorrhizal Symbioses in Rice and Medicago truncatula. The Plant Cell. 26: 1818-1830. PMID 24781115 DOI: 10.1105/tpc.113.120527  0.6
2014 Anticevic A, Cole MW, Repovs G, Murray JD, Brumbaugh MS, Winkler AM, Savic A, Krystal JH, Pearlson GD, Glahn DC. Characterizing thalamo-cortical disturbances in schizophrenia and bipolar illness. Cerebral Cortex (New York, N.Y. : 1991). 24: 3116-30. PMID 23825317 DOI: 10.1093/cercor/bht165  1
2014 Murray JD, Anticevic A, Gancsos M, Ichinose M, Corlett PR, Krystal JH, Wang XJ. Linking microcircuit dysfunction to cognitive impairment: effects of disinhibition associated with schizophrenia in a cortical working memory model. Cerebral Cortex (New York, N.Y. : 1991). 24: 859-72. PMID 23203979 DOI: 10.1093/cercor/bhs370  1
2013 Anticevic A, Cole MW, Repovs G, Savic A, Driesen NR, Yang G, Cho YT, Murray JD, Glahn DC, Wang XJ, Krystal JH. Connectivity, pharmacology, and computation: toward a mechanistic understanding of neural system dysfunction in schizophrenia. Frontiers in Psychiatry. 4: 169. PMID 24399974 DOI: 10.3389/fpsyt.2013.00169  0.56
2013 Murray JD, Cousins DR, Jackson KJ, Liu C. Signaling at the root surface: the role of cutin monomers in mycorrhization. Molecular Plant. 6: 1381-3. PMID 23935010 DOI: 10.1093/mp/sst090  0.6
2013 Wang M, Verdier J, Benedito VA, Tang Y, Murray JD, Ge Y, Becker JD, Carvalho H, Rogers C, Udvardi M, He J. LegumeGRN: a gene regulatory network prediction server for functional and comparative studies. Plos One. 8: e67434. PMID 23844010 DOI: 10.1371/journal.pone.0067434  0.6
2013 Guan D, Stacey N, Liu C, Wen J, Mysore KS, Torres-Jerez I, Vernié T, Tadege M, Zhou C, Wang ZY, Udvardi MK, Oldroyd GE, Murray JD. Rhizobial infection is associated with the development of peripheral vasculature in nodules of Medicago truncatula. Plant Physiology. 162: 107-15. PMID 23535942 DOI: 10.1104/pp.113.215111  0.6
2013 Verdier J, Torres-Jerez I, Wang M, Andriankaja A, Allen SN, He J, Tang Y, Murray JD, Udvardi MK. Establishment of the Lotus japonicus Gene Expression Atlas (LjGEA) and its use to explore legume seed maturation. The Plant Journal : For Cell and Molecular Biology. 74: 351-62. PMID 23452239 DOI: 10.1111/tpj.12119  0.6
2012 Anticevic A, Cole MW, Murray JD, Corlett PR, Wang XJ, Krystal JH. The role of default network deactivation in cognition and disease. Trends in Cognitive Sciences. 16: 584-92. PMID 23142417 DOI: 10.1016/j.tics.2012.10.008  1
2012 Anticevic A, Gancsos M, Murray JD, Repovs G, Driesen NR, Ennis DJ, Niciu MJ, Morgan PT, Surti TS, Bloch MH, Ramani R, Smith MA, Wang XJ, Krystal JH, Corlett PR. NMDA receptor function in large-scale anticorrelated neural systems with implications for cognition and schizophrenia. Proceedings of the National Academy of Sciences of the United States of America. 109: 16720-5. PMID 23012427 DOI: 10.1073/pnas.1208494109  1
2012 Pislariu CI, Murray JD, Wen J, Cosson V, Muni RR, Wang M, Benedito VA, Andriankaja A, Cheng X, Jerez IT, Mondy S, Zhang S, Taylor ME, Tadege M, Ratet P, et al. A Medicago truncatula tobacco retrotransposon insertion mutant collection with defects in nodule development and symbiotic nitrogen fixation. Plant Physiology. 159: 1686-99. PMID 22679222 DOI: 10.1104/pp.112.197061  0.6
2012 Murray JD, Jones GE, Elwood ET, Whitty LA, Garcia C. Laser angiography as a predictor of mastectomy flap necrosis after breast reconstruction. Plastic and Reconstructive Surgery. 129: 1017e-1018e. PMID 22634682 DOI: 10.1097/PRS.0b013e31824eff93  0.44
2012 Xie F, Murray JD, Kim J, Heckmann AB, Edwards A, Oldroyd GE, Downie JA. Legume pectate lyase required for root infection by rhizobia. Proceedings of the National Academy of Sciences of the United States of America. 109: 633-8. PMID 22203959 DOI: 10.1073/pnas.1113992109  0.6
2011 Young ND, Debellé F, Oldroyd GE, Geurts R, Cannon SB, Udvardi MK, Benedito VA, Mayer KF, Gouzy J, Schoof H, Van de Peer Y, Proost S, Cook DR, Meyers BC, Spannagl M, ... ... Murray JD, et al. The Medicago genome provides insight into the evolution of rhizobial symbioses. Nature. 480: 520-4. PMID 22089132 DOI: 10.1038/nature10625  0.6
2011 Oldroyd GE, Murray JD, Poole PS, Downie JA. The rules of engagement in the legume-rhizobial symbiosis. Annual Review of Genetics. 45: 119-44. PMID 21838550 DOI: 10.1146/annurev-genet-110410-132549  0.6
2011 Murray JD, Ardid S. What Can Tracking Fluctuations in Dozens of Sensory Neurons Tell about Selective Attention? Frontiers in Systems Neuroscience. 5: 35. PMID 21660102 DOI: 10.3389/fnsys.2011.00035  1
2011 Murray JD. Invasion by invitation: rhizobial infection in legumes. Molecular Plant-Microbe Interactions : Mpmi. 24: 631-9. PMID 21542766 DOI: 10.1094/MPMI-08-10-0181  0.6
2011 Murray JD, Muni RR, Torres-Jerez I, Tang Y, Allen S, Andriankaja M, Li G, Laxmi A, Cheng X, Wen J, Vaughan D, Schultze M, Sun J, Charpentier M, Oldroyd G, et al. Vapyrin, a gene essential for intracellular progression of arbuscular mycorrhizal symbiosis, is also essential for infection by rhizobia in the nodule symbiosis of Medicago truncatula. The Plant Journal : For Cell and Molecular Biology. 65: 244-52. PMID 21223389 DOI: 10.1111/j.1365-313X.2010.04415.x  0.6
2011 Murray JD, Jones GE, Elwood ET, Whitty LA, Garcia C. Reply: Nipple-areola complex evaluation in long pedicled breast reductions with real-time fluorescent videoangiography Plastic and Reconstructive Surgery. 128: 586-587. DOI: 10.1097/PRS.0b013e31821e7236  0.44
2010 Murray JD, Jones GE, Elwood ET, Whitty LA, Garcia C. Fluorescent intraoperative tissue angiography with indocyanine green: evaluation of nipple-areola vascularity during breast reduction surgery. Plastic and Reconstructive Surgery. 126: 33e-34e. PMID 20595841 DOI: 10.1097/PRS.0b013e3181dab2c2  0.4
2010 Lefebvre B, Timmers T, Mbengue M, Moreau S, Hervé C, Tóth K, Bittencourt-Silvestre J, Klaus D, Deslandes L, Godiard L, Murray JD, Udvardi MK, Raffaele S, Mongrand S, Cullimore J, et al. A remorin protein interacts with symbiotic receptors and regulates bacterial infection. Proceedings of the National Academy of Sciences of the United States of America. 107: 2343-8. PMID 20133878 DOI: 10.1073/pnas.0913320107  0.6
2009 Whitty LA, Murray JD, Null WE, Elwood ET, Jones GE. An arteriovenous malformation of the external ear in the pediatric population: A case report and review of the literature. The Canadian Journal of Plastic Surgery = Journal Canadien De Chirurgie Plastique. 17: e45-7. PMID 21119835  0.44
2009 Murray JD, Elwood ET, Jones GE, Barrick R, Feng J. Decreasing expander breast infection: A new drain care protocol. The Canadian Journal of Plastic Surgery = Journal Canadien De Chirurgie Plastique. 17: 17-21. PMID 20190908  0.44
2009 He J, Benedito VA, Wang M, Murray JD, Zhao PX, Tang Y, Udvardi MK. The Medicago truncatula gene expression atlas web server. Bmc Bioinformatics. 10: 441. PMID 20028527 DOI: 10.1186/1471-2105-10-441  0.6
2009 Whitty LA, Murray JD, Null WE, Elwood ET, Jones GE. An arteriovenous malformation of the external ear in the pediatric population: A case report and review of the literature | Une malformation artérioveineuse de l?oreille externe dans la population pédiatrique: Un rapport de cas et une analyse bibliographique Canadian Journal of Plastic Surgery. 17: e45-e47.  0.44
2008 Murray JD, Elwood ET, Barrick R, Feng J. Predicting breast reduction weight using the mass of breast ptosis. The Canadian Journal of Plastic Surgery = Journal Canadien De Chirurgie Plastique. 16: 18-22. PMID 19554160  0.44
2008 Benedito VA, Torres-Jerez I, Murray JD, Andriankaja A, Allen S, Kakar K, Wandrey M, Verdier J, Zuber H, Ott T, Moreau S, Niebel A, Frickey T, Weiller G, He J, et al. A gene expression atlas of the model legume Medicago truncatula. The Plant Journal : For Cell and Molecular Biology. 55: 504-13. PMID 18410479 DOI: 10.1111/j.1365-313X.2008.03519.x  0.6
2008 Frugier F, Kosuta S, Murray JD, Crespi M, Szczyglowski K. Cytokinin: secret agent of symbiosis. Trends in Plant Science. 13: 115-20. PMID 18296104 DOI: 10.1016/j.tplants.2008.01.003  0.6
2008 Li D, Dong Y, Ramos RG, Murray JD, MacLean K, Dementyev AE, Barrett SE. Intrinsic origin of spin echoes in dipolar solids generated by strong π pulses Physical Review B - Condensed Matter and Materials Physics. 77. DOI: 10.1103/PhysRevB.77.214306  1
2008 Jacques V, Murray JD, Marquier F, Chauvat D, Grosshans F, Treussart F, Roch JF. Enhancing single-molecule photostability by optical feedback from quantum jump detection Applied Physics Letters. 93. DOI: 10.1063/1.3013843  1
2007 Elwood ET, Sommerville DN, Murray JD. Periorbital necrotizing fasciitis. Plastic and Reconstructive Surgery. 120: 107e-111e. PMID 18090734 DOI: 10.1097/01.prs.0000287274.57709.d5  0.4
2007 Murray JD, Karas BJ, Sato S, Tabata S, Amyot L, Szczyglowski K. A cytokinin perception mutant colonized by Rhizobium in the absence of nodule organogenesis. Science (New York, N.Y.). 315: 101-4. PMID 17110535 DOI: 10.1126/science.1132514  0.6
2005 Elwood ET, Shahwan TG, Dajani N, Murray JD. Isolated xanthoma of the frontal bone. The Journal of Craniofacial Surgery. 16: 391-4. PMID 15915102  0.44
2002 Murray JD, Jones GE. Superficial peroneal nerve preservation during elevation of peroneal fasciocutaneous flaps. Plastic and Reconstructive Surgery. 110: 1688-92. PMID 12447050 DOI: 10.1097/01.PRS.0000033105.09412.07  0.44
1998 Murray JD, Ricketts RR. Mesenchymal hamartoma of the liver. The American Surgeon. 64: 1097-103. PMID 9798778  0.4
Show low-probability matches.