Joshua J. Breunig - Related publications

Yale University, New Haven, CT 
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50 most relevant papers in past 60 days:
Year Citation  Score
2021 Yao Z, Liu H, Xie F, Fischer S, Adkins RS, Aldridge AI, Ament SA, Bartlett A, Behrens MM, Van den Berge K, Bertagnolli D, de Bézieux HR, Biancalani T, Booeshaghi AS, Bravo HC, et al. A transcriptomic and epigenomic cell atlas of the mouse primary motor cortex. Nature. 598: 103-110. PMID 34616066 DOI: 10.1038/s41586-021-03500-8   
2021 Li YE, Preissl S, Hou X, Zhang Z, Zhang K, Qiu Y, Poirion OB, Li B, Chiou J, Liu H, Pinto-Duarte A, Kubo N, Yang X, Fang R, Wang X, et al. An atlas of gene regulatory elements in adult mouse cerebrum. Nature. 598: 129-136. PMID 34616068 DOI: 10.1038/s41586-021-03604-1   
2021 Nandakumar S, Shahani P, Datta I, Pal R. Interventional Strategies for Parkinson Disease: Can Neural Precursor Cells Forge a Path Ahead? Acs Chemical Neuroscience. PMID 34628850 DOI: 10.1021/acschemneuro.1c00525   
2021 Ziffra RS, Kim CN, Ross JM, Wilfert A, Turner TN, Haeussler M, Casella AM, Przytycki PF, Keough KC, Shin D, Bogdanoff D, Kreimer A, Pollard KS, Ament SA, Eichler EE, et al. Single-cell epigenomics reveals mechanisms of human cortical development. Nature. 598: 205-213. PMID 34616060 DOI: 10.1038/s41586-021-03209-8   
2021 Talukdar S, Emdad L, Das SK, Fisher PB. GAP junctions: multifaceted regulators of neuronal differentiation. Tissue Barriers. 1982349. PMID 34651545 DOI: 10.1080/21688370.2021.1982349   
2021 Telias M, Ben-Yosef D. Pharmacological Manipulation of Wnt/β-Catenin Signaling Pathway in Human Neural Precursor Cells Alters Their Differentiation Potential and Neuronal Yield. Frontiers in Molecular Neuroscience. 14: 680018. PMID 34421534 DOI: 10.3389/fnmol.2021.680018   
2021 Soto-Verdugo J, Ortega A. Critical Involvement of Glial Cells in Manganese Neurotoxicity. Biomed Research International. 2021: 1596185. PMID 34660781 DOI: 10.1155/2021/1596185   
2021 . A multimodal cell census and atlas of the mammalian primary motor cortex. Nature. 598: 86-102. PMID 34616075 DOI: 10.1038/s41586-021-03950-0   
2021 Ito H, Morishita R, Noda M, Ishiguro T, Nishikawa M, Nagata KI. The synaptic scaffolding protein CNKSR2 interacts with CYTH2 to mediate hippocampal granule cell development. The Journal of Biological Chemistry. 101427. PMID 34800437 DOI: 10.1016/j.jbc.2021.101427   
2021 Li G, Liu J, Guan Y, Ji X. The role of hypoxia in stem cell regulation of the central nervous system: From embryonic development to adult proliferation. Cns Neuroscience & Therapeutics. 27: 1446-1457. PMID 34817133 DOI: 10.1111/cns.13754   
2021 Ta AC, Huang LC, McKeown CR, Bestman JE, Van Keuren-Jensen K, Cline HT. Temporal and Spatial Transcriptomic Dynamics across Brain Development in Xenopus laevis tadpoles. G3 (Bethesda, Md.). PMID 34751375 DOI: 10.1093/g3journal/jkab387   
2021 Zhao Z, Wang Y, Wu Y, Li D, Zhang T, Ma Y, Teng X, Zuo W. Single-cell analysis defines the lineage plasticity of stem cells in cervix epithelium. Cell Regeneration (London, England). 10: 36. PMID 34719766 DOI: 10.1186/s13619-021-00096-2   
2021 Krajka V, Naujock M, Pauly MG, Stengel F, Meier B, Stanslowsky N, Klein C, Seibler P, Wegner F, Capetian P. Ventral Telencephalic Patterning Protocols for Induced Pluripotent Stem Cells. Frontiers in Cell and Developmental Biology. 9: 716249. PMID 34490265 DOI: 10.3389/fcell.2021.716249   
2021 Han JK, Shin Y, Kim HS. Direct Conversion of Cell Fate and Induced Endothelial Cells. Circulation Journal : Official Journal of the Japanese Circulation Society. PMID 34732599 DOI: 10.1253/circj.CJ-21-0703   
2021 He Z, Ding Y, Mu Y, Xu X, Kong W, Chai R, Chen X. Stem Cell-Based Therapies in Hearing Loss. Frontiers in Cell and Developmental Biology. 9: 730042. PMID 34746126 DOI: 10.3389/fcell.2021.730042   
2021 Yildirim E, Bora G, Onel T, Talas N, Yaba A. Cell fate determination and Hippo signaling pathway in preimplantation mouse embryo. Cell and Tissue Research. PMID 34586506 DOI: 10.1007/s00441-021-03530-8   
2021 Qin C, Li Y, Wang K. Novel Balance Mechanism Participates in Stem Cell Therapy to Alleviate Neuropathology and Cognitive Impairment in Animal Models with Alzheimer's Disease. Cells. 10. PMID 34685737 DOI: 10.3390/cells10102757   
2021 Alexander CM. Wnt signaling and mammary stem cells. Vitamins and Hormones. 116: 21-50. PMID 33752819 DOI: 10.1016/bs.vh.2021.02.001   
2021 Sun Y, Feng L, Liang L, Stacey GN, Wang C, Wang Y, Hu B. Neuronal cell-based medicines from pluripotent stem cells: Development, production, and preclinical assessment. Stem Cells Translational Medicine. 10: S31-S40. PMID 34724724 DOI: 10.1002/sctm.20-0522   
2021 Gupta A, Singh S. Potential Role of Growth Factors Controlled Release in Achieving Enhanced Neuronal Trans-differentiation from Mesenchymal Stem Cells for Neural Tissue Repair and Regeneration. Molecular Neurobiology. PMID 34816381 DOI: 10.1007/s12035-021-02646-w   
2021 Liu H, Zhou J, Tian W, Luo C, Bartlett A, Aldridge A, Lucero J, Osteen JK, Nery JR, Chen H, Rivkin A, Castanon RG, Clock B, Li YE, Hou X, et al. DNA methylation atlas of the mouse brain at single-cell resolution. Nature. 598: 120-128. PMID 34616061 DOI: 10.1038/s41586-020-03182-8   
2021 Chang CY, Ting HC, Liu CA, Su HL, Chiou TW, Harn HJ, Lin SZ, Ho TJ. Differentiation of Human Pluripotent Stem Cells Into Specific Neural Lineages. Cell Transplantation. 30: 9636897211017829. PMID 34665040 DOI: 10.1177/09636897211017829   
2021 Girard JR, Goins LM, Vuu DM, Sharpley MS, Spratford CM, Mantri SR, Banerjee U. Paths and pathways that generate cell-type heterogeneity and developmental progression in hematopoiesis. Elife. 10. PMID 34713801 DOI: 10.7554/eLife.67516   
2021 Beura SK, Panigrahi AR, Yadav P, Agrawal S, Singh SK. Role of Neurons and Glia Cells in Wound Healing as a Novel Perspective Considering Platelet as a Conventional Player. Molecular Neurobiology. PMID 34633653 DOI: 10.1007/s12035-021-02587-4   
2021 Inoue Y, Hasegawa S, Hasebe Y, Kawagishi-Hotta M, Okuno R, Yamada T, Adachi H, Miyachi K, Ishii Y, Sugiura K, Akamatsu H. Establishment of Three Types of Immortalized Human Skin Stem Cell Lines Derived from the Single Donor. Biological & Pharmaceutical Bulletin. 44: 1403-1412. PMID 34602549 DOI: 10.1248/bpb.b21-00058   
2021 Sun Z, Tang Y, Zhang Y, Fang Y, Jia J, Zeng W, Fang D. Joint single-cell multiomic analysis in Wnt3a induced asymmetric stem cell division. Nature Communications. 12: 5941. PMID 34642323 DOI: 10.1038/s41467-021-26203-0   
2021 Chen Z, Huang Y, Yu C, Liu Q, Qiu C, Wan G. Cochlear Sox2 Glial Cells Are Potent Progenitors for Spiral Ganglion Neuron Reprogramming Induced by Small Molecules. Frontiers in Cell and Developmental Biology. 9: 728352. PMID 34621745 DOI: 10.3389/fcell.2021.728352   
2021 Zheng J, Ye Y, Xu Q, Xu W, Zhang W, Chen X. A Modified SMART-Seq Method for Single-Cell Transcriptomic Analysis of Embryoid Body Differentiation. Methods in Molecular Biology (Clifton, N.J.). PMID 34661880 DOI: 10.1007/7651_2021_435   
2021 Shrestha S, Singhal S, Kalonick M, Guyer R, Volkert A, Somji S, Garrett SH, Sens DA, Singhal SK. Role of HRTPT in kidney proximal epithelial cell regeneration: Integrative differential expression and pathway analyses using microarray and scRNA-seq. Journal of Cellular and Molecular Medicine. PMID 34626063 DOI: 10.1111/jcmm.16976   
2021 Oh S, Gray DHD, Chong MMW. Single-Cell RNA Sequencing Approaches for Tracing T Cell Development. Journal of Immunology (Baltimore, Md. : 1950). 207: 363-370. PMID 34644259 DOI: 10.4049/jimmunol.2100408   
2021 Seo JH, Jeon YJ. Global proteomic analysis of mesenchymal stem cells derived from human embryonic stem cells via connective tissue growth factor treatment under chemically defined feeder-free culture conditions. Journal of Microbiology and Biotechnology. 32. PMID 34750284 DOI: 10.4014/jmb.2110.10032   
2021 Cerveny KL, Bronstein H, Hagen O, Lamb DB, Martin G, Tower I, Van Duzer A, Welch E, Varga M. Mutations linked to loss of cell cycle control can render cells responsive to local differentiation cues. Micropublication Biology. 2021. PMID 34723143 DOI: 10.17912/micropub.biology.000481   
2021 Little MH, Howden SE, Lawlor KT, Vanslambrouck JM. Determining lineage relationships in kidney development and disease. Nature Reviews. Nephrology. PMID 34594045 DOI: 10.1038/s41581-021-00485-5   
2021 Wang Y, Zheng X, Cheng R, Han J, Ma X, Xu W, Gao L, Lei A, Liu J, Quan F, Zhang Y, Liu X. Asymmetric expression of maternal mRNA governs first cell-fate decision. Faseb Journal : Official Publication of the Federation of American Societies For Experimental Biology. 35: e22006. PMID 34694646 DOI: 10.1096/fj.202101196R   
2021 Nam H, Lee IH, Sa JK, Kim SS, Pyeon HJ, Lee KH, Lee K, Lee SH, Joo KM. Effects of Long-Term In Vitro Expansion on Genetic Stability and Tumor Formation Capacity of Stem Cells. Stem Cell Reviews and Reports. PMID 34738209 DOI: 10.1007/s12015-021-10290-z   
2021 Brown JW, Cho CJ, Mills JC. Paligenosis: Cellular Remodeling During Tissue Repair. Annual Review of Physiology. PMID 34705482 DOI: 10.1146/annurev-physiol-061121-035954   
2021 Voortman L, Johnston RJ. Transcriptional repression in stochastic gene expression, patterning, and cell fate specification. Developmental Biology. 481: 129-138. PMID 34688689 DOI: 10.1016/j.ydbio.2021.10.002   
2021 Umair Z, Kumar V, Goutam RS, Kumar S, Lee U, Kim J. Controls Neuroectoderm Specification via Dual Circuits of Direct Repression and Indirect Stimulation in Embryos. Molecules and Cells. 44: 723-735. PMID 34711690 DOI: 10.14348/molcells.2021.0055   
2021 Nakhaei-Nejad M, Trinity L, Jabbari H, Pasdar M, Jahroudi N. In Silico Analysis to Explore Lineage-Independent and -Dependent Transcriptional Programs Associated with the Process of Endothelial and Neural Differentiation of Human Induced Pluripotent Stem Cells. Journal of Clinical Medicine. 10. PMID 34575270 DOI: 10.3390/jcm10184161   
2021 Jiang G, Tu J, Zhou L, Dong M, Fan J, Chang Z, Zhang L, Bian X, Liu S. Single-cell transcriptomics reveal the heterogeneity and dynamic of cancer stem-like cells during breast tumor progression. Cell Death & Disease. 12: 979. PMID 34675206 DOI: 10.1038/s41419-021-04261-y   
2021 Haase F, Gloss BS, Tam PPL, Gold WA. WGCNA Identifies Translational and Proteasome-Ubiquitin Dysfunction in Rett Syndrome. International Journal of Molecular Sciences. 22. PMID 34576118 DOI: 10.3390/ijms22189954   
2021 Sabatier P, Beusch CM, Saei AA, Aoun M, Moruzzi N, Coelho A, Leijten N, Nordenskjöld M, Micke P, Maltseva D, Tonevitsky AG, Millischer V, Carlos Villaescusa J, Kadekar S, Gaetani M, et al. An integrative proteomics method identifies a regulator of translation during stem cell maintenance and differentiation. Nature Communications. 12: 6558. PMID 34772928 DOI: 10.1038/s41467-021-26879-4   
2021 Cao Y. Neural is Fundamental: Neural Stemness as the Ground State of Cell Tumorigenicity and Differentiation Potential. Stem Cell Reviews and Reports. PMID 34714532 DOI: 10.1007/s12015-021-10275-y   
2021 Bhaduri A, Sandoval-Espinosa C, Otero-Garcia M, Oh I, Yin R, Eze UC, Nowakowski TJ, Kriegstein AR. An atlas of cortical arealization identifies dynamic molecular signatures. Nature. 598: 200-204. PMID 34616070 DOI: 10.1038/s41586-021-03910-8   
2021 Mai Z, Chen H, Ye Y, Hu Z, Sun W, Cui L, Zhao X. Translational and Clinical Applications of Dental Stem Cell-Derived Exosomes. Frontiers in Genetics. 12: 750990. PMID 34764982 DOI: 10.3389/fgene.2021.750990   
2021 Sundaravadivelu PK, Raina K, Thool M, Ray A, Joshi JM, Kaveeshwar V, Sudhagar S, Lenka N, Thummer RP. Tissue-Restricted Stem Cells as Starting Cell Source for Efficient Generation of Pluripotent Stem Cells: An Overview. Advances in Experimental Medicine and Biology. PMID 34611861 DOI: 10.1007/5584_2021_660   
2021 Jiang Z, Generoso SF, Badia M, Payer B, Carey LB. A conserved expression signature predicts growth rate and reveals cell & lineage-specific differences. Plos Computational Biology. 17: e1009582. PMID 34762642 DOI: 10.1371/journal.pcbi.1009582   
2021 Sozen B, Jorgensen V, Weatherbee BAT, Chen S, Zhu M, Zernicka-Goetz M. Reconstructing aspects of human embryogenesis with pluripotent stem cells. Nature Communications. 12: 5550. PMID 34548496 DOI: 10.1038/s41467-021-25853-4   
2021 Dou Z, Son JE, Hui CC. and - Novel Regulatory Factors of Postnatal Hypothalamic Neurogenesis. Frontiers in Neuroscience. 15: 763856. PMID 34795556 DOI: 10.3389/fnins.2021.763856   
2021 Mateus-Pinheiro A, Patrício P, Alves ND, Martins-Macedo J, Caetano I, Silveira-Rosa T, Araújo B, Mateus-Pinheiro M, Silva-Correia J, Sardinha VM, Loureiro-Campos E, Rodrigues AJ, Oliveira JF, Bessa JM, Sousa N, et al. Hippocampal cytogenesis abrogation impairs inter-regional communication between the hippocampus and prefrontal cortex and promotes the time-dependent manifestation of emotional and cognitive deficits. Molecular Psychiatry. PMID 34521994 DOI: 10.1038/s41380-021-01287-8