Eric A. Bushong, Ph.D. - Publications

Affiliations: 
University of California, San Diego, La Jolla, CA 
Area:
Bioinformatics, Electron Microscopy, Imaging, Microscopy, Subcellular Structure

62 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

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Year Citation  Score
2021 Ashaber M, Tomina Y, Kassraian P, Bushong EA, Kristan WB, Ellisman MH, Wagenaar DA. Anatomy and activity patterns in a multifunctional motor neuron and its surrounding circuits. Elife. 10. PMID 33587033 DOI: 10.7554/eLife.61881  0.92
2020 Merlini M, Rafalski VA, Ma K, Kim KY, Bushong EA, Rios Coronado PE, Yan Z, Mendiola AS, Sozmen EG, Ryu JK, Haberl MG, Madany M, Sampson DN, Petersen MA, Bardehle S, et al. Microglial G-dependent dynamics regulate brain network hyperexcitability. Nature Neuroscience. PMID 33318667 DOI: 10.1038/s41593-020-00756-7  0.92
2019 Sanculi D, Pannoni KE, Bushong EA, Crump M, Sung M, Popat V, Zaher C, Hicks E, Song A, Mofakham N, Li P, Antzoulatos EG, Fioravante D, Ellisman MH, DeBello WM. Toric spines at a site of learning. Eneuro. PMID 31822521 DOI: 10.1523/ENEURO.0197-19.2019  0.92
2019 Garcia GC, Bartol TM, Phan S, Bushong EA, Perkins G, Sejnowski TJ, Ellisman MH, Skupin A. Mitochondrial morphology provides a mechanism for energy buffering at synapses. Scientific Reports. 9: 18306. PMID 31797946 DOI: 10.1038/s41598-019-54159-1  0.92
2019 Wesseling JF, Phan S, Bushong EA, Siksou L, Marty S, Pérez-Otaño I, Ellisman M. Sparse force-bearing bridges between neighboring synaptic vesicles. Brain Structure & Function. PMID 31667576 DOI: 10.1007/s00429-019-01966-x  0.4
2019 Kim KY, Rios LC, Le H, Perez AJ, Phan S, Bushong EA, Deerinck TJ, Liu YH, Ellisman MA, Lev-Ram V, Ju S, Panda SA, Yoon S, Hirayama M, Mure LS, et al. Synaptic Specializations of Melanopsin-Retinal Ganglion Cells in Multiple Brain Regions Revealed by Genetic Label for Light and Electron Microscopy. Cell Reports. 29: 628-644.e6. PMID 31618632 DOI: 10.1016/j.celrep.2019.09.006  0.92
2019 E Drigo RA, Jacob S, García-Prieto CF, Zheng X, Fukuda M, Nhu HTT, Stelmashenko O, Peçanha FLM, Rodriguez-Diaz R, Bushong E, Deerinck T, Phan S, Ali Y, Leibiger I, Chua M, et al. Author Correction: Structural basis for delta cell paracrine regulation in pancreatic islets. Nature Communications. 10: 4218. PMID 31511521 DOI: 10.1038/s41467-019-12258-7  0.92
2019 Arrojo E Drigo R, Jacob S, García-Prieto CF, Zheng X, Fukuda M, Nhu HTT, Stelmashenko O, Peçanha FLM, Rodriguez-Diaz R, Bushong E, Deerinck T, Phan S, Ali Y, Leibiger I, Chua M, et al. Structural basis for delta cell paracrine regulation in pancreatic islets. Nature Communications. 10: 3700. PMID 31420552 DOI: 10.1038/s41467-019-11517-x  0.92
2019 Vasin A, Sabeva N, Torres C, Phan S, Bushong EA, Ellisman MH, Bykhovskaia M. Two Pathways for the Activity-Dependent Growth and Differentiation of Synaptic Boutons in . Eneuro. PMID 31387877 DOI: 10.1523/ENEURO.0060-19.2019  0.92
2019 Zhu Y, Huang M, Bushong E, Phan S, Uytiepo M, Beutter E, Boemer D, Tsui K, Ellisman M, Maximov A. Class IIa HDACs regulate learning and memory through dynamic experience-dependent repression of transcription. Nature Communications. 10: 3469. PMID 31375688 DOI: 10.1038/s41467-019-11409-0  0.4
2019 Arrojo E Drigo R, Lev-Ram V, Tyagi S, Ramachandra R, Deerinck T, Bushong E, Phan S, Orphan V, Lechene C, Ellisman MH, Hetzer MW. Age Mosaicism across Multiple Scales in Adult Tissues. Cell Metabolism. PMID 31178361 DOI: 10.1016/j.cmet.2019.05.010  0.92
2019 Zhang Y, Tsang TK, Bushong EA, Chu LA, Chiang AS, Ellisman MH, Reingruber J, Su CY. Asymmetric ephaptic inhibition between compartmentalized olfactory receptor neurons. Nature Communications. 10: 1560. PMID 30952860 DOI: 10.1038/s41467-019-09346-z  0.92
2018 Pipkin JE, Bushong EA, Ellisman MH, Kristan WB. Verifying, Challenging, and Discovering New Synapses Among Fully EM-Reconstructed Neurons in the Leech Ganglion. Frontiers in Neuroanatomy. 12: 95. PMID 30487738 DOI: 10.3389/fnana.2018.00095  0.92
2018 Hatani T, Funakoshi S, Deerinck TJ, Bushong EA, Kimura T, Takeshima H, Ellisman MH, Hoshijima M, Yoshida Y. Nano-structural analysis of engrafted human induced pluripotent stem cell-derived cardiomyocytes in mouse hearts using a genetic-probe APEX2. Biochemical and Biophysical Research Communications. PMID 30333092 DOI: 10.1016/j.bbrc.2018.10.020  0.92
2018 Haberl MG, Churas C, Tindall L, Boassa D, Phan S, Bushong EA, Madany M, Akay R, Deerinck TJ, Peltier ST, Ellisman MH. CDeep3M-Plug-and-Play cloud-based deep learning for image segmentation. Nature Methods. 15: 677-680. PMID 30171236 DOI: 10.1038/s41592-018-0106-z  0.92
2018 Katchalski T, Case T, Kim KY, Ramachandra R, Bushong EA, Deerinck TJ, Haberl MG, Mackey MR, Peltier S, Castillon GA, Fujikawa N, Lawrence AR, Ellisman MH. Iron-specific Signal Separation from within Heavy Metal Stained Biological Samples Using X-Ray Microtomography with Polychromatic Source and Energy-Integrating Detectors. Scientific Reports. 8: 7553. PMID 29765060 DOI: 10.1038/s41598-018-25099-z  0.92
2018 Tsang TK, Bushong EA, Boassa D, Hu J, Romoli B, Phan S, Dulcis D, Su CY, Ellisman MH. High-quality ultrastructural preservation using cryofixation for 3D electron microscopy of genetically labeled tissues. Elife. 7. PMID 29749931 DOI: 10.7554/eLife.35524  0.92
2017 Petersen MA, Ryu JK, Chang KJ, Etxeberria A, Bardehle S, Mendiola AS, Kamau-Devers W, Fancy SPJ, Thor A, Bushong EA, Baeza-Raja B, Syme CA, Wu MD, Rios Coronado PE, Meyer-Franke A, et al. Fibrinogen Activates BMP Signaling in Oligodendrocyte Progenitor Cells and Inhibits Remyelination after Vascular Damage. Neuron. PMID 29103804 DOI: 10.1016/j.neuron.2017.10.008  0.92
2017 Sando R, Bushong E, Zhu Y, Huang M, Considine C, Phan S, Ju S, Uytiepo M, Ellisman M, Maximov A. Assembly of Excitatory Synapses in the Absence of Glutamatergic Neurotransmission. Neuron. 94: 312-321.e3. PMID 28426966 DOI: 10.1016/j.neuron.2017.03.047  0.4
2017 Su FY, Bushong EA, Deerinck TJ, Seo K, Herrera S, Graeve OA, Kisailus D, Lubarda VA, McKittrick J. Spines of the porcupine fish: Structure, composition, and mechanical properties. Journal of the Mechanical Behavior of Biomedical Materials. PMID 28274703 DOI: 10.1016/j.jmbbm.2017.02.029  0.72
2017 Cao M, Wu Y, Ashrafi G, McCartney AJ, Wheeler H, Bushong EA, Boassa D, Ellisman MH, Ryan TA, De Camilli P. Parkinson Sac Domain Mutation in Synaptojanin 1 Impairs Clathrin Uncoating at Synapses and Triggers Dystrophic Changes in Dopaminergic Axons. Neuron. 93: 882-896.e5. PMID 28231468 DOI: 10.1016/j.neuron.2017.01.019  0.92
2017 de Vivo L, Bellesi M, Marshall W, Bushong EA, Ellisman MH, Tononi G, Cirelli C. Ultrastructural evidence for synaptic scaling across the wake/sleep cycle. Science (New York, N.Y.). 355: 507-510. PMID 28154076 DOI: 10.1126/science.aah5982  0.92
2017 Ilouz R, Lev-Ram V, Bushong EA, Stiles TL, Friedmann-Morvinski D, Douglas C, Goldberg G, Ellisman MH, Taylor SS. Isoform-specific subcellular localization and function of protein kinase A identified by mosaic imaging of mouse brain. Elife. 6. PMID 28079521 DOI: 10.7554/eLife.17681  0.92
2017 Bouwer JC, Deerinck TJ, Bushong E, Astakhov V, Ramachandra R, Peltier ST, Ellisman MH. Deceleration of probe beam by stage bias potential improves resolution of serial block-face scanning electron microscopic images. Advanced Structural and Chemical Imaging. 2: 11. PMID 27695667 DOI: 10.1186/s40679-016-0025-y  0.92
2016 Gillies AR, Chapman MA, Bushong EA, Deerinck TJ, Ellisman MH, Lieber RL. High resolution three-dimensional reconstruction of fibrotic skeletal muscle extracellular matrix. The Journal of Physiology. PMID 27859324 DOI: 10.1113/JP273376  0.92
2016 Adams SR, Mackey MR, Ramachandra R, Palida Lemieux SF, Steinbach P, Bushong EA, Butko MT, Giepmans BN, Ellisman MH, Tsien RY. Multicolor Electron Microscopy for Simultaneous Visualization of Multiple Molecular Species. Cell Chemical Biology. PMID 27818300 DOI: 10.1016/j.chembiol.2016.10.006  0.92
2016 Pipkin JE, Bushong EA, Ellisman MH, Kristan WB. Patterns and distribution of presynaptic and postsynaptic elements within serial electron microscopic reconstructions of neuronal arbors from the medicinal leech Hirudo verbana. The Journal of Comparative Neurology. PMID 27636374 DOI: 10.1002/cne.24128  0.92
2016 Ou HD, Deerinck TJ, Bushong E, Ellisman MH, O'Shea CC. Corrigendum to 'Visualizing viral protein structures in cells using genetic probes for correlated light and electron microscopy' [Methods 90 (2015) 39-48]. Methods (San Diego, Calif.). PMID 27221672 DOI: 10.1016/j.ymeth.2016.05.005  0.92
2016 Moss J, Gebara E, Bushong EA, Sánchez-Pascual I, O'Laoi R, El M'Ghari I, Kocher-Braissant J, Ellisman MH, Toni N. Fine processes of Nestin-GFP-positive radial glia-like stem cells in the adult dentate gyrus ensheathe local synapses and vasculature. Proceedings of the National Academy of Sciences of the United States of America. PMID 27091993 DOI: 10.1073/pnas.1514652113  0.92
2016 Jung JY, Naleway SE, Yaraghi NA, Herrera S, Sherman VR, Bushong EA, Ellisman MH, Kisailus D, McKittrick J. Structural analysis of the tongue and hyoid apparatus in a woodpecker. Acta Biomaterialia. PMID 27000554 DOI: 10.1016/j.actbio.2016.03.030  0.92
2015 Mills EA, Davis CH, Bushong EA, Boassa D, Kim KY, Ellisman MH, Marsh-Armstrong N. Astrocytes phagocytose focal dystrophies from shortening myelin segments in the optic nerve of Xenopus laevis at metamorphosis. Proceedings of the National Academy of Sciences of the United States of America. 112: 10509-14. PMID 26240339 DOI: 10.1073/pnas.1506486112  0.92
2015 Ou HD, Deerinck TJ, Bushong E, Ellisman MH, O'Shea CC. Visualizing viral protein structures in cells using genetic probes for correlated light and electron microscopy. Methods (San Diego, Calif.). PMID 26066760 DOI: 10.1016/j.ymeth.2015.06.002  0.92
2015 Bushong EA, Johnson DD, Kim KY, Terada M, Hatori M, Peltier ST, Panda S, Merkle A, Ellisman MH. X-ray microscopy as an approach to increasing accuracy and efficiency of serial block-face imaging for correlated light and electron microscopy of biological specimens. Microscopy and Microanalysis : the Official Journal of Microscopy Society of America, Microbeam Analysis Society, Microscopical Society of Canada. 21: 231-8. PMID 25392009 DOI: 10.1017/S1431927614013579  0.92
2015 Mills EA, Davis CHO, Bushong EA, Boassa D, Kim KY, Ellisman MH, Marsh-Armstrong N. Astrocytes phagocytose focal dystrophies from shortening myelin segments in the optic nerve of Xenopus laevis at metamorphosis Proceedings of the National Academy of Sciences of the United States of America. 112: 10509-10514. DOI: 10.1073/pnas.1506486112  0.92
2015 Kim KY, Perkins GA, Shim MS, Bushong E, Alcasid N, Ju S, Ellisman MH, Weinreb RN, Ju WK. DRP1 inhibition rescues retinal ganglion cells and their axons by preserving mitochondrial integrity in a mouse model of glaucoma Cell Death and Disease. 6. DOI: 10.1038/cddis.2015.180  0.92
2015 Ellisman MH, Deerinck TJ, Kim KY, Bushong EA, Phan S, Ting AY, Boassa D. Advances in molecular probe-based labeling tools and their application to multiscale multimodal correlated microscopies Journal of Chemical Biology. DOI: 10.1007/s12154-015-0132-6  0.92
2014 Perez AJ, Seyedhosseini M, Deerinck TJ, Bushong EA, Panda S, Tasdizen T, Ellisman MH. A workflow for the automatic segmentation of organelles in electron microscopy image stacks. Frontiers in Neuroanatomy. 8: 126. PMID 25426032 DOI: 10.3389/fnana.2014.00126  0.92
2014 Gillies AR, Bushong EA, Deerinck TJ, Ellisman MH, Lieber RL. Three-dimensional reconstruction of skeletal muscle extracellular matrix ultrastructure. Microscopy and Microanalysis : the Official Journal of Microscopy Society of America, Microbeam Analysis Society, Microscopical Society of Canada. 20: 1835-40. PMID 25275291 DOI: 10.1017/S1431927614013300  0.92
2014 Davis CH, Kim KY, Bushong EA, Mills EA, Boassa D, Shih T, Kinebuchi M, Phan S, Zhou Y, Bihlmeyer NA, Nguyen JV, Jin Y, Ellisman MH, Marsh-Armstrong N. Transcellular degradation of axonal mitochondria. Proceedings of the National Academy of Sciences of the United States of America. 111: 9633-8. PMID 24979790 DOI: 10.1073/pnas.1404651111  0.92
2014 Haustein MD, Kracun S, Lu XH, Shih T, Jackson-Weaver O, Tong X, Xu J, Yang XW, O'Dell TJ, Marvin JS, Ellisman MH, Bushong EA, Looger LL, Khakh BS. Conditions and constraints for astrocyte calcium signaling in the hippocampal mossy fiber pathway. Neuron. 82: 413-29. PMID 24742463 DOI: 10.1016/j.neuron.2014.02.041  0.92
2014 Ramachandra R, Bouwer JC, Mackey MR, Bushong E, Peltier ST, Xuong NH, Ellisman MH. Improving signal to noise in labeled biological specimens using energy-filtered TEM of sections with a drift correction strategy and a direct detection device. Microscopy and Microanalysis : the Official Journal of Microscopy Society of America, Microbeam Analysis Society, Microscopical Society of Canada. 20: 706-14. PMID 24641915 DOI: 10.1017/S1431927614000452  0.92
2014 Wilke SA, Raam T, Antonios JK, Bushong EA, Koo EH, Ellisman MH, Ghosh A. Specific disruption of hippocampal mossy fiber synapses in a mouse model of familial Alzheimer's disease. Plos One. 9: e84349. PMID 24454724 DOI: 10.1371/journal.pone.0084349  0.92
2013 Wong J, Baddeley D, Bushong EA, Yu Z, Ellisman MH, Hoshijima M, Soeller C. Nanoscale distribution of ryanodine receptors and caveolin-3 in mouse ventricular myocytes: dilation of t-tubules near junctions. Biophysical Journal. 104: L22-4. PMID 23746531 DOI: 10.1016/j.bpj.2013.02.059  0.92
2013 Lu W, Bushong EA, Shih TP, Ellisman MH, Nicoll RA. The cell-autonomous role of excitatory synaptic transmission in the regulation of neuronal structure and function. Neuron. 78: 433-9. PMID 23664612 DOI: 10.1016/j.neuron.2013.02.030  0.92
2013 Shigetomi E, Bushong EA, Haustein MD, Tong X, Jackson-Weaver O, Kracun S, Xu J, Sofroniew MV, Ellisman MH, Khakh BS. Imaging calcium microdomains within entire astrocyte territories and endfeet with GCaMPs expressed using adeno-associated viruses. The Journal of General Physiology. 141: 633-47. PMID 23589582 DOI: 10.1085/jgp.201210949  0.92
2013 Boassa D, Berlanga ML, Yang MA, Terada M, Hu J, Bushong EA, Hwang M, Masliah E, George JM, Ellisman MH. Mapping the subcellular distribution of α-synuclein in neurons using genetically encoded probes for correlated light and electron microscopy: implications for Parkinson's disease pathogenesis. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 33: 2605-15. PMID 23392688 DOI: 10.1523/JNEUROSCI.2898-12.2013  0.92
2013 Wilke SA, Antonios JK, Bushong EA, Badkoobehi A, Malek E, Hwang M, Terada M, Ellisman MH, Ghosh A. Deconstructing complexity: serial block-face electron microscopic analysis of the hippocampal mossy fiber synapse. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 33: 507-22. PMID 23303931 DOI: 10.1523/JNEUROSCI.1600-12.2013  0.92
2012 Friedmann-Morvinski D, Bushong EA, Ke E, Soda Y, Marumoto T, Singer O, Ellisman MH, Verma IM. Dedifferentiation of neurons and astrocytes by oncogenes can induce gliomas in mice. Science (New York, N.Y.). 338: 1080-4. PMID 23087000 DOI: 10.1126/science.1226929  0.92
2012 Hatori M, Vollmers C, Zarrinpar A, DiTacchio L, Bushong EA, Gill S, Leblanc M, Chaix A, Joens M, Fitzpatrick JA, Ellisman MH, Panda S. Time-restricted feeding without reducing caloric intake prevents metabolic diseases in mice fed a high-fat diet. Cell Metabolism. 15: 848-60. PMID 22608008 DOI: 10.1016/j.cmet.2012.04.019  0.92
2011 Foo LC, Allen NJ, Bushong EA, Ventura PB, Chung WS, Zhou L, Cahoy JD, Daneman R, Zong H, Ellisman MH, Barres BA. Development of a method for the purification and culture of rodent astrocytes. Neuron. 71: 799-811. PMID 21903074 DOI: 10.1016/j.neuron.2011.07.022  0.92
2011 Williams ME, Wilke SA, Daggett A, Davis E, Otto S, Ravi D, Ripley B, Bushong EA, Ellisman MH, Klein G, Ghosh A. Cadherin-9 regulates synapse-specific differentiation in the developing hippocampus. Neuron. 71: 640-55. PMID 21867881 DOI: 10.1016/j.neuron.2011.06.019  0.92
2011 Bagnall MW, Hull C, Bushong EA, Ellisman MH, Scanziani M. Multiple clusters of release sites formed by individual thalamic afferents onto cortical interneurons ensure reliable transmission. Neuron. 71: 180-94. PMID 21745647 DOI: 10.1016/j.neuron.2011.05.032  0.92
2011 Berlanga ML, Phan S, Bushong EA, Wu S, Kwon O, Phung BS, Lamont S, Terada M, Tasdizen T, Martone ME, Ellisman MH. Three-dimensional reconstruction of serial mouse brain sections: solution for flattening high-resolution large-scale mosaics. Frontiers in Neuroanatomy. 5: 17. PMID 21629828 DOI: 10.3389/fnana.2011.00017  0.92
2011 Nguyen JV, Soto I, Kim KY, Bushong EA, Oglesby E, Valiente-Soriano FJ, Yang Z, Davis CH, Bedont JL, Son JL, Wei JO, Buchman VL, Zack DJ, Vidal-Sanz M, Ellisman MH, et al. Myelination transition zone astrocytes are constitutively phagocytic and have synuclein dependent reactivity in glaucoma. Proceedings of the National Academy of Sciences of the United States of America. 108: 1176-81. PMID 21199938 DOI: 10.1073/pnas.1013965108  0.92
2010 Kenyon KA, Bushong EA, Mauer AS, Strehler EE, Weinberg RJ, Burette AC. Cellular and subcellular localization of the neuron-specific plasma membrane calcium ATPase PMCA1a in the rat brain. The Journal of Comparative Neurology. 518: 3169-83. PMID 20575074 DOI: 10.1002/cne.22409  0.92
2007 Jinno S, Klausberger T, Marton LF, Dalezios Y, Roberts JD, Fuentealba P, Bushong EA, Henze D, Buzsáki G, Somogyi P. Neuronal diversity in GABAergic long-range projections from the hippocampus. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 27: 8790-804. PMID 17699661 DOI: 10.1523/JNEUROSCI.1847-07.2007  0.92
2007 Toni N, Teng EM, Bushong EA, Aimone JB, Zhao C, Consiglio A, van Praag H, Martone ME, Ellisman MH, Gage FH. Synapse formation on neurons born in the adult hippocampus. Nature Neuroscience. 10: 727-34. PMID 17486101 DOI: 10.1038/nn1908  0.92
2006 Wilhelmsson U, Bushong EA, Price DL, Smarr BL, Phung V, Terada M, Ellisman MH, Pekny M. Redefining the concept of reactive astrocytes as cells that remain within their unique domains upon reaction to injury. Proceedings of the National Academy of Sciences of the United States of America. 103: 17513-8. PMID 17090684 DOI: 10.1073/pnas.0602841103  0.92
2004 Bushong EA, Martone ME, Ellisman MH. Maturation of astrocyte morphology and the establishment of astrocyte domains during postnatal hippocampal development. International Journal of Developmental Neuroscience : the Official Journal of the International Society For Developmental Neuroscience. 22: 73-86. PMID 15036382 DOI: 10.1016/j.ijdevneu.2003.12.008  0.92
2003 Bushong EA, Martone ME, Ellisman MH. Examination of the relationship between astrocyte morphology and laminar boundaries in the molecular layer of adult dentate gyrus. The Journal of Comparative Neurology. 462: 241-51. PMID 12794746 DOI: 10.1002/cne.10728  0.92
2002 Bushong EA, Martone ME, Jones YZ, Ellisman MH. Protoplasmic astrocytes in CA1 stratum radiatum occupy separate anatomical domains. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 22: 183-92. PMID 11756501  0.92
2001 Capani F, Deerinck TJ, Ellisman MH, Bushong E, Bobik M, Martone ME. Phalloidin-eosin followed by photo-oxidation: a novel method for localizing F-actin at the light and electron microscopic levels. The Journal of Histochemistry and Cytochemistry : Official Journal of the Histochemistry Society. 49: 1351-61. PMID 11668188 DOI: 10.1177/002215540104901103  0.92
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