Year |
Citation |
Score |
2019 |
Gleeson P, Cantarelli M, Marin B, Quintana A, Earnshaw M, Sadeh S, Piasini E, Birgiolas J, Cannon RC, Cayco-Gajic NA, Crook S, Davison AP, Dura-Bernal S, Ecker A, Hines ML, ... ... Larson SD, et al. Open Source Brain: A Collaborative Resource for Visualizing, Analyzing, Simulating, and Developing Standardized Models of Neurons and Circuits. Neuron. PMID 31201122 DOI: 10.1016/J.Neuron.2019.05.019 |
0.421 |
|
2018 |
Sarma GP, Lee CW, Portegys T, Ghayoomie V, Jacobs T, Alicea B, Cantarelli M, Currie M, Gerkin RC, Gingell S, Gleeson P, Gordon R, Hasani RM, Idili G, Khayrulin S, ... ... Larson SD, et al. OpenWorm: overview and recent advances in integrative biological simulation of . Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences. 373. PMID 30201845 DOI: 10.1098/Rstb.2017.0382 |
0.68 |
|
2018 |
Gleeson P, Lung D, Grosu R, Hasani R, Larson SD. c302: a multiscale framework for modelling the nervous system of . Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences. 373. PMID 30201842 DOI: 10.1098/Rstb.2017.0379 |
0.356 |
|
2018 |
Palyanov A, Khayrulin S, Larson SD. Three-dimensional simulation of the body and muscle cells in liquid and gel environments for behavioural analysis. Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences. 373. PMID 30201840 DOI: 10.1098/Rstb.2017.0376 |
0.32 |
|
2018 |
Larson SD, Gleeson P, Brown AEX. Connectome to behaviour: modelling at cellular resolution. Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences. 373. PMID 30201832 DOI: 10.1098/Rstb.2017.0366 |
0.354 |
|
2016 |
Sarma GP, Jacobs TW, Watts MD, Ghayoomie SV, Larson SD, Gerkin RC. Unit testing, model validation, and biological simulation. F1000research. 5: 1946. PMID 27635225 DOI: 10.12688/F1000Research.9315.1 |
0.373 |
|
2016 |
Palyanov A, Khayrulin S, Larson SD. Application of smoothed particle hydrodynamics to modeling mechanisms of biological tissue Advances in Engineering Software. 98: 1-11. DOI: 10.1016/J.Advengsoft.2016.03.002 |
0.315 |
|
2015 |
Gleeson P, Cantarelli M, Currie M, Hokanson J, Idili G, Khayrulin S, Palyanov A, Szigeti B, Larson S. The OpenWorm Project: currently available resources and future plans Bmc Neuroscience. 16. DOI: 10.1186/1471-2202-16-S1-P141 |
0.428 |
|
2014 |
Szigeti B, Gleeson P, Vella M, Khayrulin S, Palyanov A, Hokanson J, Currie M, Cantarelli M, Idili G, Larson S. OpenWorm: an open-science approach to modeling Caenorhabditis elegans. Frontiers in Computational Neuroscience. 8: 137. PMID 25404913 DOI: 10.3389/Fncom.2014.00137 |
0.412 |
|
2013 |
Larson SD, Martone ME. NeuroLex.org: an online framework for neuroscience knowledge. Frontiers in Neuroinformatics. 7: 18. PMID 24009581 DOI: 10.3389/Fninf.2013.00018 |
0.607 |
|
2012 |
Cachat J, Bandrowski A, Grethe JS, Gupta A, Astakhov V, Imam F, Larson SD, Martone ME. A survey of the neuroscience resource landscape: perspectives from the neuroscience information framework. International Review of Neurobiology. 103: 39-68. PMID 23195120 DOI: 10.1016/B978-0-12-388408-4.00003-4 |
0.584 |
|
2012 |
Imam FT, Larson SD, Bandrowski A, Grethe JS, Gupta A, Martone ME. Development and use of Ontologies Inside the Neuroscience Information Framework: A Practical Approach. Frontiers in Genetics. 3: 111. PMID 22737162 DOI: 10.3389/Fgene.2012.00111 |
0.634 |
|
2012 |
Boline J, Avants B, Baldock R, Bakker R, Burger A, Gee J, Haselgrove C, Hess A, Ibanez L, Larson S, Majka P, Okamura-Oho Y, Ruffins S, Zaslavsky I. Registration workflows for the creation of INCF digital atlas hubs F1000research. 3. DOI: 10.7490/F1000Research.1092759.1 |
0.374 |
|
2012 |
Imam FT, Larson S, Bandrowski A, Grethe JS, Gupta A, Martone ME. Maturation of neuroscience information framework: An ontology driven information system for neuroscience Frontiers in Artificial Intelligence and Applications. 239: 15-28. DOI: 10.3233/978-1-61499-084-0-15 |
0.475 |
|
2012 |
Le Franc Y, Davison AP, Gleeson P, Imam FT, Kriener B, Larson SD, Ray S, Schwabe L, Hill S, De Schutter E. Computational Neuroscience Ontology: a new tool to provide semantic meaning to your models Bmc Neuroscience. 13. DOI: 10.1186/1471-2202-13-S1-P149 |
0.485 |
|
2011 |
Hawrylycz M, Baldock RA, Burger A, Hashikawa T, Johnson GA, Martone M, Ng L, Lau C, Larson SD, Larsen SD, Nissanov J, Puelles L, Ruffins S, Verbeek F, Zaslavsky I, et al. Digital atlasing and standardization in the mouse brain. Plos Computational Biology. 7: e1001065. PMID 21304938 DOI: 10.1371/Journal.Pcbi.1001065 |
0.559 |
|
2011 |
Ellisman M, Shu X, Lev-Ram V, Deerinck T, Tsien R, Lamont S, Martinez J, Berlanga M, Bushong E, Martone M, Larson S. Bridging Gaps in Imaging by Applying EM Tomography and Serial Block Face SEM, Including a New Genetically Encoded Tag for Correlated Light and 3D Electron Microscopy of Intact Cells, Tissues and Organisms: Integrating the Resulting Correlated Image Data Using the Whole Brain Catalog Microscopy and Microanalysis. 17: 2-3. DOI: 10.1017/S1431927611000882 |
0.523 |
|
2009 |
Larson SD, Martone ME. Ontologies for Neuroscience: What are they and What are they Good for? Frontiers in Neuroscience. 3: 60-7. PMID 19753098 DOI: 10.3389/Neuro.01.007.2009 |
0.608 |
|
2009 |
Larson S, Maynard S, Imam F, Martone M. NeuroLex.org - A semantic wiki for neuroinformatics based on the NIF Standard Ontology Frontiers in Neuroinformatics. 3. DOI: 10.3389/conf.neuro.11.2009.08.078 |
0.508 |
|
2009 |
Larson SD, Maynard SM, Imam F, Martone ME. NeuroLex.org-A semantic wiki for neuroinformatics based on the NIF standard ontology Ceur Workshop Proceedings. 559. DOI: 10.3389/Conf.Neuro.11.2009.08.078 |
0.546 |
|
2009 |
Larson S, Aprea C, Maynard S, Imam F, Ellisman M, Martone M. A multi-scale spatial and semantic knowledge framework for neuroanatomy Frontiers in Neuroinformatics. 3. DOI: 10.3389/Conf.Neuro.11.2009.08.015 |
0.6 |
|
2009 |
Maynard S, Fong L, Larson S, Memon A, Lewis S, Mungall C, Martone M. Using ontologies to define the relation between neurodegenerative disease and associated animal model phenotypes Frontiers in Neuroinformatics. 3. DOI: 10.3389/Conf.Neuro.11.2009.08.009 |
0.487 |
|
2008 |
Bug WJ, Ascoli GA, Grethe JS, Gupta A, Fennema-Notestine C, Laird AR, Larson SD, Rubin D, Shepherd GM, Turner JA, Martone ME. The NIFSTD and BIRNLex vocabularies: building comprehensive ontologies for neuroscience. Neuroinformatics. 6: 175-94. PMID 18975148 DOI: 10.1007/S12021-008-9032-Z |
0.618 |
|
2008 |
Martone ME, Tran J, Wong WW, Sargis J, Fong L, Larson S, Lamont SP, Gupta A, Ellisman MH. The cell centered database project: an update on building community resources for managing and sharing 3D imaging data. Journal of Structural Biology. 161: 220-31. PMID 18054501 DOI: 10.1016/J.Jsb.2007.10.003 |
0.625 |
|
2007 |
Larson SD, Fong LL, Gupta A, Condit C, Bug WJ, Martone ME. A formal ontology of subcellular neuroanatomy. Frontiers in Neuroinformatics. 1: 3. PMID 18974798 DOI: 10.3389/Neuro.11.003.2007 |
0.616 |
|
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