Ephraim L. Tsalik, Ph.D. - Publications

Affiliations: 
Columbia University, New York, NY 

39 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2016 Tsalik EL, Henao R, Nichols M, Burke T, Ko ER, McClain MT, Hudson LL, Mazur A, Freeman DH, Veldman T, Langley RJ, Quackenbush EB, Glickman SW, Cairns CB, Jaehne AK, et al. Host gene expression classifiers diagnose acute respiratory illness etiology. Science Translational Medicine. 8: 322ra11. PMID 26791949 DOI: 10.1126/scitranslmed.aad6873  1
2016 Yang WE, Suchindran S, Nicholson BP, McClain MT, Burke T, Ginsburg GS, Harro CD, Chakraborty S, Sack DA, Woods CW, Tsalik EL. Transcriptomic Analysis of the Host Response and Innate Resilience to Enterotoxigenic Escherichia coli Infection in Humans. The Journal of Infectious Diseases. PMID 26787651 DOI: 10.1093/infdis/jiv593  1
2015 McClain MT, Henao R, Williams J, Nicholson B, Veldman T, Hudson L, Tsalik EL, Lambkin-Williams R, Gilbert A, Mann A, Ginsburg GS, Woods CW. Differential evolution of peripheral cytokine levels in symptomatic and asymptomatic responses to experimental influenza virus challenge. Clinical and Experimental Immunology. PMID 26506932 DOI: 10.1111/cei.12736  1
2015 Ruopp M, Chiswell K, Thaden JT, Merchant K, Tsalik EL. Respiratory Tract Infection Clinical Trials from 2007-2012: A Systematic Review of ClinicalTrials.gov. Annals of the American Thoracic Society. PMID 26360527 DOI: 10.1513/AnnalsATS.201505-291OC  1
2015 Ko ER, Yang WE, McClain MT, Woods CW, Ginsburg GS, Tsalik EL. What was old is new again: using the host response to diagnose infectious disease. Expert Review of Molecular Diagnostics. 1-16. PMID 26145249 DOI: 10.1586/14737159.2015.1059278  1
2015 Tsalik EL, Willig LK, Rice BJ, van Velkinburgh JC, Mohney RP, McDunn JE, Dinwiddie DL, Miller NA, Mayer ES, Glickman SW, Jaehne AK, Glew RH, Sopori ML, Otero RM, Harrod KS, et al. Renal systems biology of patients with systemic inflammatory response syndrome. Kidney International. PMID 25993322 DOI: 10.1038/ki.2015.150  1
2015 Tsalik EL, McClain M, Zaas AK. Moving toward prime time: host signatures for diagnosis of respiratory infections. The Journal of Infectious Diseases. 212: 173-5. PMID 25637349 DOI: 10.1093/infdis/jiv032  1
2015 Tsalik EL. Beauty is only skin deep Science Translational Medicine. 7. DOI: 10.1126/scitranslmed.aab0846  1
2015 Tsalik EL. Fear as a cardiovascular risk factor Science Translational Medicine. 7. DOI: 10.1126/scitranslmed.aaa6252  1
2015 Tsalik EL. Seq and the city Science Translational Medicine. 7. DOI: 10.1126/scitranslmed.aaa5547  1
2015 Yang WE, Woods CW, Tsalik EL. Host-based diagnostics for detection and prognosis of infectious diseases Methods in Microbiology. DOI: 10.1016/bs.mim.2015.06.001  1
2014 Tsalik EL, Langley RJ, Dinwiddie DL, Miller NA, Yoo B, van Velkinburgh JC, Smith LD, Thiffault I, Jaehne AK, Valente AM, Henao R, Yuan X, Glickman SW, Rice BJ, McClain MT, et al. An integrated transcriptome and expressed variant analysis of sepsis survival and death. Genome Medicine. 6: 111. PMID 25538794 DOI: 10.1186/s13073-014-0111-5  1
2014 Zaas AK, Garner BH, Tsalik EL, Burke T, Woods CW, Ginsburg GS. The current epidemiology and clinical decisions surrounding acute respiratory infections. Trends in Molecular Medicine. 20: 579-88. PMID 25201713 DOI: 10.1016/j.molmed.2014.08.001  1
2014 Langley RJ, Tipper JL, Bruse S, Baron RM, Tsalik EL, Huntley J, Rogers AJ, Jaramillo RJ, O'Donnell D, Mega WM, Keaton M, Kensicki E, Gazourian L, Fredenburgh LE, Massaro AF, et al. Integrative "omic" analysis of experimental bacteremia identifies a metabolic signature that distinguishes human sepsis from systemic inflammatory response syndromes. American Journal of Respiratory and Critical Care Medicine. 190: 445-55. PMID 25054455 DOI: 10.1164/rccm.201404-0624OC  1
2014 Yan Q, Sharma-Kuinkel BK, Deshmukh H, Tsalik EL, Cyr DD, Lucas J, Woods CW, Scott WK, Sempowski GD, Thaden JT, Thaden J, Rude TH, Ahn SH, Fowler VG. Dusp3 and Psme3 are associated with murine susceptibility to Staphylococcus aureus infection and human sepsis. Plos Pathogens. 10: e1004149. PMID 24901344 DOI: 10.1371/journal.ppat.1004149  1
2014 Goswami ND, Tsalik EL, Naggie S, Miller WC, Horton JR, Pfeiffer CD, Hicks CB. A cross-sectional analysis of HIV and hepatitis C clinical trials 2007 to 2010: the relationship between industry sponsorship and randomized study design. Trials. 15: 31. PMID 24450313 DOI: 10.1186/1745-6215-15-31  1
2014 Tsalik EL. Crowdsourcing disease prognosis Science Translational Medicine. 6. DOI: 10.1126/scitranslmed.aaa2069  1
2014 Tsalik EL. Sequence-specific antibiotics Science Translational Medicine. 6: 259ec183. DOI: 10.1126/scitranslmed.aaa0896  1
2014 Tsalik EL. The microbial origins of obesity Science Translational Medicine. 6. DOI: 10.1126/scitranslmed.3010265  1
2014 Tsalik EL. Cardiovascular genetics: All systems point to TREML4 Science Translational Medicine. 6. DOI: 10.1126/scitranslmed.3009814  1
2014 Tsalik EL. Antimicrobial drug resistance in all four corners of the earth Science Translational Medicine. 6. DOI: 10.1126/scitranslmed.3009591  1
2014 Tsalik EL. The sum of one's parts? What our microbiomes say about us Science Translational Medicine. 6. DOI: 10.1126/scitranslmed.3009260  1
2013 Goswami ND, Pfeiffer CD, Horton JR, Chiswell K, Tasneem A, Tsalik EL. The state of infectious diseases clinical trials: a systematic review of ClinicalTrials.gov. Plos One. 8: e77086. PMID 24146958 DOI: 10.1371/journal.pone.0077086  1
2013 Zaas AK, Burke T, Chen M, McClain M, Nicholson B, Veldman T, Tsalik EL, Fowler V, Rivers EP, Otero R, Kingsmore SF, Voora D, Lucas J, Hero AO, Carin L, et al. A host-based RT-PCR gene expression signature to identify acute respiratory viral infection. Science Translational Medicine. 5: 203ra126. PMID 24048524 DOI: 10.1126/scitranslmed.3006280  1
2013 Xiao B, Wang Y, Li W, Baker M, Guo J, Corbet K, Tsalik EL, Li QJ, Palmer SM, Woods CW, Li Z, Chao NJ, He YW. Plasma microRNA signature as a noninvasive biomarker for acute graft-versus-host disease. Blood. 122: 3365-75. PMID 24041574 DOI: 10.1182/blood-2013-06-510586  1
2013 Langley RJ, Tsalik EL, van Velkinburgh JC, Glickman SW, Rice BJ, Wang C, Chen B, Carin L, Suarez A, Mohney RP, Freeman DH, Wang M, You J, Wulff J, Thompson JW, et al. An integrated clinico-metabolomic model improves prediction of death in sepsis. Science Translational Medicine. 5: 195ra95. PMID 23884467 DOI: 10.1126/scitranslmed.3005893  1
2013 Ahn SH, Tsalik EL, Cyr DD, Zhang Y, van Velkinburgh JC, Langley RJ, Glickman SW, Cairns CB, Zaas AK, Rivers EP, Otero RM, Veldman T, Kingsmore SF, Lucas J, Woods CW, et al. Gene expression-based classifiers identify Staphylococcus aureus infection in mice and humans. Plos One. 8: e48979. PMID 23326304 DOI: 10.1371/journal.pone.0048979  1
2012 Tsalik EL, Jaggers LB, Glickman SW, Langley RJ, van Velkinburgh JC, Park LP, Fowler VG, Cairns CB, Kingsmore SF, Woods CW. Discriminative value of inflammatory biomarkers for suspected sepsis. The Journal of Emergency Medicine. 43: 97-106. PMID 22056545 DOI: 10.1016/j.jemermed.2011.05.072  1
2011 Tsalik EL, Cunningham CK, Cunningham HM, Lopez-Marti MG, Sangvai DG, Purdy WK, Anderson DJ, Thompson JR, Brown M, Woods CW, Jaggers LB, Hendershot EF. An Infection Control Program for a 2009 influenza A H1N1 outbreak in a university-based summer camp. Journal of American College Health : J of Ach. 59: 419-26. PMID 21500062 DOI: 10.1080/07448481.2010.534215  1
2010 Tsalik EL, Jaggers LB. Life-threatening asymptomatic incidentaloma: a case report of idiopathic CD4 lymphocytopenia and opportunistic infections. The American Journal of the Medical Sciences. 340: 158-9. PMID 20581653 DOI: 10.1097/MAJ.0b013e3181e5f118  1
2010 Glickman SW, Cairns CB, Otero RM, Woods CW, Tsalik EL, Langley RJ, van Velkinburgh JC, Park LP, Glickman LT, Fowler VG, Kingsmore SF, Rivers EP. Disease progression in hemodynamically stable patients presenting to the emergency department with sepsis. Academic Emergency Medicine : Official Journal of the Society For Academic Emergency Medicine. 17: 383-90. PMID 20370777 DOI: 10.1111/j.1553-2712.2010.00664.x  1
2010 Tsalik EL, Hendershot EF, Sangvai DG, Cunningham HM, Cunningham CK, Lopez-Marti MG, Purdy WK, Woods CW, Caram LB. Clinical presentation and response to treatment of novel influenza A H1N1 in a university-based summer camp population. Journal of Clinical Virology : the Official Publication of the Pan American Society For Clinical Virology. 47: 286-8. PMID 20064740 DOI: 10.1016/j.jcv.2009.12.012  1
2010 Tsalik EL, Jones D, Nicholson B, Waring L, Liesenfeld O, Park LP, Glickman SW, Caram LB, Langley RJ, van Velkinburgh JC, Cairns CB, Rivers EP, Otero RM, Kingsmore SF, Lalani T, et al. Multiplex PCR to diagnose bloodstream infections in patients admitted from the emergency department with sepsis. Journal of Clinical Microbiology. 48: 26-33. PMID 19846634 DOI: 10.1128/JCM.01447-09  1
2009 Tsalik EL, Woods CW. Sepsis redefined: the search for surrogate markers. International Journal of Antimicrobial Agents. 34: S16-20. PMID 19931810 DOI: 10.1016/S0924-8579(09)70560-6  1
2005 Tsalik EL. DNA-based immunotherapy to treat atopic disease. Annals of Allergy, Asthma & Immunology : Official Publication of the American College of Allergy, Asthma, & Immunology. 95: 403-10; quiz 410-1, . PMID 16312161 DOI: 10.1016/S1081-1206(10)61163-5  1
2003 Tsalik EL, Niacaris T, Wenick AS, Pau K, Avery L, Hobert O. LIM homeobox gene-dependent expression of biogenic amine receptors in restricted regions of the C. elegans nervous system. Developmental Biology. 263: 81-102. PMID 14568548 DOI: 10.1016/S0012-1606(03)00447-0  1
2003 Tsalik EL, Hobert O. Functional mapping of neurons that control locomotory behavior in Caenorhabditis elegans. Journal of Neurobiology. 56: 178-97. PMID 12838583 DOI: 10.1002/neu.10245  1
2001 Altun-Gultekin Z, Andachi Y, Tsalik EL, Pilgrim D, Kohara Y, Hobert O. A regulatory cascade of three homeobox genes, ceh-10, ttx-3 and ceh-23, controls cell fate specification of a defined interneuron class in C. elegans. Development (Cambridge, England). 128: 1951-69. PMID 11493519  1
1998 Tsalik EL, Gartenberg MR. Curing Saccharomyces cerevisiae of the 2 micron plasmid by targeted DNA damage. Yeast (Chichester, England). 14: 847-52. PMID 9818722 DOI: 10.1002/(SICI)1097-0061(19980630)14:9<847::AID-YEA285>3.0.CO;2-9  1
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