Ramin Pashaie, Ph.D. - Publications

University of Pennsylvania, Philadelphia, PA, United States 

31/40 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2016 Pawela C, DeYoe E, Pashaie R. Intracranial Injection of an Optogenetics Viral Vector Followed by Optical Cannula Implantation for Neural Stimulation in Rat Brain Cortex. Methods in Molecular Biology (Clifton, N.J.). 1408: 227-41. PMID 26965126 DOI: 10.1007/978-1-4939-3512-3_15  1
2015 Liu Y, Jacques SL, Azimipour M, Rogers JD, Pashaie R, Eliceiri KW. OptogenSIM: a 3D Monte Carlo simulation platform for light delivery design in optogenetics. Biomedical Optics Express. 6: 4859-70. PMID 26713200 DOI: 10.1364/BOE.6.004859  1
2015 Pashaie R, Baumgartner R, Richner TJ, Brodnick SK, Azimipour M, Eliceiri KW, Williams JC. Closed-Loop Optogenetic Brain Interface. Ieee Transactions On Bio-Medical Engineering. 62: 2327-37. PMID 26011877 DOI: 10.1109/TBME.2015.2436817  1
2015 Richner TJ, Baumgartner R, Brodnick SK, Azimipour M, Krugner-Higby LA, Eliceiri KW, Williams JC, Pashaie R. Patterned optogenetic modulation of neurovascular and metabolic signals. Journal of Cerebral Blood Flow and Metabolism : Official Journal of the International Society of Cerebral Blood Flow and Metabolism. 35: 140-7. PMID 25388678 DOI: 10.1038/jcbfm.2014.189  1
2015 Atry F, Frye S, Richner TJ, Brodnick SK, Soehartono A, Williams J, Pashaie R. Monitoring cerebral hemodynamics following optogenetic stimulation via optical coherence tomography. Ieee Transactions On Bio-Medical Engineering. 62: 766-73. PMID 25373076 DOI: 10.1109/TBME.2014.2364816  1
2014 Park DW, Schendel AA, Mikael S, Brodnick SK, Richner TJ, Ness JP, Hayat MR, Atry F, Frye ST, Pashaie R, Thongpang S, Ma Z, Williams JC. Graphene-based carbon-layered electrode array technology for neural imaging and optogenetic applications. Nature Communications. 5: 5258. PMID 25327513 DOI: 10.1038/ncomms6258  1
2014 Azimipour M, Baumgartner R, Liu Y, Jacques SL, Eliceiri K, Pashaie R. Extraction of optical properties and prediction of light distribution in rat brain tissue. Journal of Biomedical Optics. 19: 75001. PMID 24996660 DOI: 10.1117/1.JBO.19.7.075001  1
2014 Schendel AA, Nonte MW, Vokoun C, Richner TJ, Brodnick SK, Atry F, Frye S, Bostrom P, Pashaie R, Thongpang S, Eliceiri KW, Williams JC. The effect of micro-ECoG substrate footprint on the meningeal tissue response. Journal of Neural Engineering. 11: 046011. PMID 24941335 DOI: 10.1088/1741-2560/11/4/046011  1
2014 Pashaie R, Anikeeva P, Lee JH, Prakash R, Yizhar O, Prigge M, Chander D, Richner TJ, Williams J. Optogenetic brain interfaces. Ieee Reviews in Biomedical Engineering. 7: 3-30. PMID 24802525 DOI: 10.1109/RBME.2013.2294796  1
2014 Richner TJ, Thongpang S, Brodnick SK, Schendel AA, Falk RW, Krugner-Higby LA, Pashaie R, Williams JC. Optogenetic micro-electrocorticography for modulating and localizing cerebral cortex activity. Journal of Neural Engineering. 11: 016010. PMID 24445482 DOI: 10.1088/1741-2560/11/1/016010  1
2014 Novakovic B, Pashaie R, Nasiri A. Neural network based energy storage control for wind farms Pemwa 2014 - 2014 Ieee Symposium On Power Electronics and Machines For Wind and Water Applications. DOI: 10.1109/PEMWA.2014.6912229  1
2014 Pashaie R. Associative memory in a volume holographic medium: A new approach based on operator theory Journal of Optics (United Kingdom). 16. DOI: 10.1088/2040-8978/16/7/075701  1
2014 Pashaie R. Distributed light delivery and detection via single optical fiber and tilted grating Journal of Modern Optics. 61: 518-529. DOI: 10.1080/09500340.2014.899641  1
2013 Azimipour M, Pashaie R. Nonlinear optical signal processing on multiwavelength sensitive materials. Optics Letters. 38: 4324-6. PMID 24177084 DOI: 10.1364/OL.38.004324  1
2013 Pashaie R, Falk R. Spectral analysis of whisking output via optogenetic modulation of vibrissa cortex in rat. Biomedical Optics Express. 4: 122-33. PMID 23304652 DOI: 10.1364/BOE.4.000122  1
2013 Pashaie R, Falk R. Single optical fiber probe for fluorescence detection and optogenetic stimulation. Ieee Transactions On Bio-Medical Engineering. 60: 268-80. PMID 23060317 DOI: 10.1109/TBME.2012.2221713  1
2013 Azimipour M, Pashaie R. Optical signal processing on photorefractive crystal substrate and bacteriorhodopsin thin film Proceedings of Spie - the International Society For Optical Engineering. 8621. DOI: 10.1117/12.2004977  1
2012 Habibi M, Pashaie R. A new approach for implementation of associative memory using volume holographic materials Proceedings of Spie - the International Society For Optical Engineering. 8255. DOI: 10.1117/12.909320  1
2012 Baumgartner R, Falk R, Pashaie R. Realization of an endoscope equipped with microprojection system for optogenetics Progress in Biomedical Optics and Imaging - Proceedings of Spie. 8225. DOI: 10.1117/12.907458  1
2012 Falk R, Habibi M, Pashaie R. Single optical fiber probe for optogenetics Progress in Biomedical Optics and Imaging - Proceedings of Spie. 8225. DOI: 10.1117/12.907453  1
2011 Diester I, Kaufman MT, Mogri M, Pashaie R, Goo W, Yizhar O, Ramakrishnan C, Deisseroth K, Shenoy KV. An optogenetic toolbox designed for primates. Nature Neuroscience. 14: 387-97. PMID 21278729 DOI: 10.1038/nn.2749  1
2009 Pashaie R, Farhat NH. Self-organization in a parametrically coupled logistic map network: a model for information processing in the visual cortex. Ieee Transactions On Neural Networks / a Publication of the Ieee Neural Networks Council. 20: 597-608. PMID 19273047 DOI: 10.1109/TNN.2008.2010703  1
2008 Pashaie R, Farhat NH. Analytic model for the dynamics of electron trapping materials with applications in nonlinear optical signal processing Journal of the Optical Society of America B: Optical Physics. 25: 15-21. DOI: 10.1364/JOSAB.25.000015  1
2007 Pashaie R, Farhat NH. Optical realization of bioinspired spiking neurons in the electron trapping material thin film. Applied Optics. 46: 8411-8. PMID 18071371  1
2007 Pashaie R, Farhat NH. Realization of receptive fields with excitatory and inhibitory responses on equilibrium-state luminescence of electron trapping material. Optics Letters. 32: 1501-3. PMID 17546168 DOI: 10.1364/OL.32.001501  1
2007 Pashaie R, Farhat NH. Dynamics of electron-trapping materials under blue light and near-infrared exposure: An improved model Journal of the Optical Society of America B: Optical Physics. 24: 1927-1941. DOI: 10.1364/JOSAB.24.001927  1
2007 Pashaie R, Farhat N. Equilibrium-state emission of electron-trapping material thin-film for applications in nonlinear-dynamics Proceedings of Spie - the International Society For Optical Engineering. 6469. DOI: 10.1117/12.700369  1
2007 Pashaie R. Fourier decomposition analysis of anisotropic inhomogeneous dielectric waveguide structures Ieee Transactions On Microwave Theory and Techniques. 55: 1689-1696. DOI: 10.1109/TMTT.2007.902616  1
2006 Pashaie R, Farhat N. Optical realization of the retinal ganglion receptive fields in electron-trapping material thin film Bioengineering, Proceedings of the Northeast Conference. 2006: 1-2.  1
2006 Pashaie R, Farhat N. Optical realization of bio-inspired spiking neurons in SrS: Eu2+,Sm3+ thin film Optics Infobase Conference Papers 1
2006 Pashaie R, Farhat N. Optical realization of bio-inspired spiking neurons In SrS: Eu2+, Sm3+ thin film Optics Infobase Conference Papers 1
Low-probability matches
2020 Chen RC, Atry F, Richner T, Brodnick SK, Pisaniello J, Ness J, Suminski A, Williams JC, Pashaie R. A system identification analysis of optogenetically evoked electrocorticography and cerebral blood flow responses. Journal of Neural Engineering. PMID 32299067 DOI: 10.1088/1741-2552/ab89fc  0.01
2019 Stevenson ME, Kay JJM, Atry F, Wickstrom AT, Krueger JR, Pashaie RE, Swain RA. Wheel running for 26 weeks is associated with sustained vascular plasticity in the rat motor cortex. Behavioural Brain Research. 380: 112447. PMID 31870777 DOI: 10.1016/j.bbr.2019.112447  0.01
2018 Atry F, Chen RC, Pisaniello J, Brodnick S, Suminski A, Novello J, Ness J, Williams J, Pashaie R. Optogenetic interrogation of neurovascular coupling in the cerebral cortex of transgenic mice. Journal of Neural Engineering. PMID 30080158 DOI: 10.1088/1741-2552/aad840  0.01
2017 Park DW, Ness JP, Brodnick SK, Esquibel C, Novello J, Atry F, Baek DH, Kim H, Bong J, Swanson KI, Suminski AJ, Otto KJ, Pashaie R, Williams JC, Ma Z. Electrical Neural Stimulation and Simultaneous In Vivo Monitoring with Transparent Graphene Electrode Arrays Implanted in GCaMP6f mice. Acs Nano. PMID 29253337 DOI: 10.1021/acsnano.7b04321  0.01
2017 Azimipour M, Sheikhzadeh M, Baumgartner R, Cullen PK, Helmstetter FJ, Chang WJ, Pashaie R. Fluorescence laminar optical tomography for brain imaging: system implementation and performance evaluation. Journal of Biomedical Optics. 22: 16003. PMID 28056143 DOI: 10.1117/1.JBO.22.1.016003  0.01
2016 Park DW, Brodnick SK, Ness JP, Atry F, Krugner-Higby L, Sandberg A, Mikael S, Richner TJ, Novello J, Kim H, Baek DH, Bong J, Frye ST, Thongpang S, Swanson KI, ... ... Pashaie R, et al. Fabrication and utility of a transparent graphene neural electrode array for electrophysiology, in vivo imaging, and optogenetics. Nature Protocols. 11: 2201-2222. PMID 27735935 DOI: 10.1038/nprot.2016.127  0.01
2016 Azimipour M, Atry F, Pashaie R. Calibration of digital optical phase conjugation setups based on orthonormal rectangular polynomials. Applied Optics. 55: 2873-80. PMID 27139849  0.01
2016 Atry F, Pashaie R. Analysis of intermediary scan-lens and tube-lens mechanisms for optical coherence tomography. Applied Optics. 55: 646-53. PMID 26836064  0.01
2015 Azimipour M, Atry F, Pashaie R. Effect of blood vessels on light distribution in optogenetic stimulation of cortex. Optics Letters. 40: 2173-6. PMID 26393692  0.01
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