John G. Burleigh, Ph.D. - Publications

Affiliations: 
2002 University of Missouri - Columbia, Columbia, MO, United States 

32 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Tribble CM, Alzate-Guarín F, Gándara E, Vartoumian A, Burleigh JG, Zenil-Ferguson R, Specht CD, Rothfels CJ. The rapid radiation of Bomarea (Alstroemeriaceae: Liliales), driven by the rise of the Andes. Evolution; International Journal of Organic Evolution. PMID 37831628 DOI: 10.1093/evolut/qpad184  0.707
2019 Zenil-Ferguson R, Burleigh JG, Freyman WA, Igić B, Mayrose I, Goldberg EE. Interaction among ploidy, breeding system and lineage diversification. The New Phytologist. 224: 1252-1265. PMID 31617595 DOI: 10.1111/Nph.16184  0.7
2018 Tiley GP, Barker MS, Burleigh JG. Assessing the performance of Ks plots for detecting ancient whole genome duplications. Genome Biology and Evolution. PMID 30239709 DOI: 10.1093/Gbe/Evy200  0.313
2018 Tiley GP, Kimball RT, Braun EL, Burleigh JG. Comparison of the Chinese bamboo partridge and red Junglefowl genome sequences highlights the importance of demography in genome evolution. Bmc Genomics. 19: 336. PMID 29739321 DOI: 10.1186/S12864-018-4711-0  0.363
2018 Zenil-Ferguson R, Burleigh JG, Ponciano JM. chromploid: An R package for chromosome number evolution across the plant tree of life. Applications in Plant Sciences. 6: e1037. PMID 29732267 DOI: 10.1002/Aps3.1037  0.686
2017 Zenil-Ferguson R, Ponciano JM, Burleigh JG. Testing the association of phenotypes with polyploidy: An example using herbaceous and woody eudicots. Evolution; International Journal of Organic Evolution. PMID 28295270 DOI: 10.1111/Evo.13226  0.703
2016 Zenil-Ferguson R, Ponciano JM, Burleigh JG. Evaluating the role of genome downsizing and size thresholds from genome size distributions in angiosperms. American Journal of Botany. PMID 27206462 DOI: 10.3732/Ajb.1500408  0.668
2016 Tiley GP, Ané C, Burleigh JG. Evaluating and characterizing ancient whole genome duplications in plants with gene count data. Genome Biology and Evolution. PMID 26988251 DOI: 10.1093/Gbe/Evw058  0.362
2016 Sun M, Naeem R, Su J, Cao Z, Burleigh JG, Soltis PS, Soltis DE, Chen Z. Phylogeny of theRosidae: A dense taxon sampling analysis Journal of Systematics and Evolution. 54: 363-391. DOI: 10.1111/Jse.12211  0.311
2015 Tiley GP, Burleigh JG. Erratum to: The relationship of recombination rate, genome structure, and patterns of molecular evolution across angiosperms. Bmc Evolutionary Biology. 15: 244. PMID 26553259 DOI: 10.1186/s12862-015-0525-8  0.319
2015 Tiley GP, Burleigh JG, Burleigh G. The relationship of recombination rate, genome structure, and patterns of molecular evolution across angiosperms. Bmc Evolutionary Biology. 15: 194. PMID 26377000 DOI: 10.1186/s12862-015-0473-3  0.319
2015 Deans AR, Lewis SE, Huala E, Anzaldo SS, Ashburner M, Balhoff JP, Blackburn DC, Blake JA, Burleigh JG, Chanet B, Cooper LD, Courtot M, Csösz S, Cui H, Dahdul W, et al. Finding our way through phenotypes. Plos Biology. 13: e1002033. PMID 25562316 DOI: 10.1371/Journal.Pbio.1002033  0.566
2015 Burleigh JG, Kimball RT, Braun EL. Building the avian tree of life using a large-scale, sparse supermatrix Molecular Phylogenetics and Evolution. 84: 53-63. PMID 25550149 DOI: 10.1016/J.Ympev.2014.12.003  0.33
2015 Sun M, Soltis DE, Soltis PS, Zhu X, Burleigh JG, Chen Z. Deep phylogenetic incongruence in the angiosperm clade Rosidae. Molecular Phylogenetics and Evolution. 83: 156-66. PMID 25463749 DOI: 10.1016/J.Ympev.2014.11.003  0.33
2014 Wickett NJ, Mirarab S, Nguyen N, Warnow T, Carpenter E, Matasci N, Ayyampalayam S, Barker MS, Burleigh JG, Gitzendanner MA, Ruhfel BR, Wafula E, Der JP, Graham SW, Mathews S, et al. Phylotranscriptomic analysis of the origin and early diversification of land plants. Proceedings of the National Academy of Sciences of the United States of America. 111: E4859-68. PMID 25355905 DOI: 10.1073/Pnas.1323926111  0.366
2014 Ruhfel BR, Gitzendanner MA, Soltis PS, Soltis DE, Burleigh JG. From algae to angiosperms-inferring the phylogeny of green plants (Viridiplantae) from 360 plastid genomes. Bmc Evolutionary Biology. 14: 23. PMID 24533922 DOI: 10.1186/1471-2148-14-23  0.414
2013 Burleigh JG, Alphonse K, Alverson AJ, Bik HM, Blank C, Cirranello AL, Cui H, Daly M, Dietterich TG, Gasparich G, Irvine J, Julius M, Kaufman S, Law E, Liu J, et al. Next-generation phenomics for the Tree of Life. Plos Currents. 5. PMID 23827969 DOI: 10.1371/Currents.Tol.085C713Acafc8711B2Ff7010A4B03733  0.306
2013 Soltis DE, Mort ME, Latvis M, Mavrodiev EV, O'Meara BC, Soltis PS, Burleigh JG, Rubio de Casas R. Phylogenetic relationships and character evolution analysis of Saxifragales using a supermatrix approach. American Journal of Botany. 100: 916-29. PMID 23629845 DOI: 10.3732/Ajb.1300044  0.38
2013 Burleigh JG. Identifying the phylogenetic context of whole-genome duplications in plants Polyploidy and Genome Evolution. 77-92. DOI: 10.1007/978-3-642-31442-1_5  0.362
2012 Lin HT, Burleigh JG, Eulenstein O. Consensus properties for the deep coalescence problem and their application for scalable tree search. Bmc Bioinformatics. 13: S12. PMID 22759417 DOI: 10.1186/1471-2105-13-S10-S12  0.3
2012 Ponciano JM, Burleigh JG, Braun EL, Taper ML. Assessing parameter identifiability in phylogenetic models using data cloning. Systematic Biology. 61: 955-72. PMID 22649181 DOI: 10.1093/Sysbio/Sys055  0.592
2012 Burleigh JG, Barbazuk WB, Davis JM, Morse AM, Soltis PS. Exploring Diversification and Genome Size Evolution in Extant Gymnosperms through Phylogenetic Synthesis Journal of Botany. 2012: 1-6. DOI: 10.1155/2012/292857  0.439
2011 Burleigh JG, Bansal MS, Eulenstein O, Hartmann S, Wehe A, Vision TJ. Genome-scale phylogenetics: inferring the plant tree of life from 18,896 gene trees. Systematic Biology. 60: 117-25. PMID 21186249 DOI: 10.1093/Sysbio/Syq072  0.366
2011 Soltis PS, Burleigh JG, Chanderbali AS, Yoo MJ, Soltis DE. Gene and Genome Duplications in Plants Evolution After Gene Duplication. 269-298. DOI: 10.1002/9780470619902.ch15  0.316
2010 Moore MJ, Soltis PS, Bell CD, Burleigh JG, Soltis DE. Phylogenetic analysis of 83 plastid genes further resolves the early diversification of eudicots. Proceedings of the National Academy of Sciences of the United States of America. 107: 4623-8. PMID 20176954 DOI: 10.1073/Pnas.0907801107  0.397
2010 Soltis DE, Moore MJ, Burleigh JG, Bell CD, Soltis PS. Assembling the angiosperm tree of life: Progress and future prospects Annals of the Missouri Botanical Garden. 97: 514-526. DOI: 10.3417/2009136  0.342
2009 Burleigh JG, Bansal MS, Wehe A, Eulenstein O. Locating large-scale gene duplication events through reconciled trees: implications for identifying ancient polyploidy events in plants. Journal of Computational Biology : a Journal of Computational Molecular Cell Biology. 16: 1071-83. PMID 19689214 DOI: 10.1089/Cmb.2009.0139  0.339
2009 Soltis DE, Burleigh JG. Surviving the K-T mass extinction: new perspectives of polyploidization in angiosperms. Proceedings of the National Academy of Sciences of the United States of America. 106: 5455-6. PMID 19336584 DOI: 10.1073/Pnas.0901994106  0.41
2007 Burleigh JG, Mathews S. Assessing among-locus variation in the inference of seed plant phylogeny International Journal of Plant Sciences. 168: 111-124. DOI: 10.1086/509586  0.304
2005 Ané C, Burleigh JG, McMahon MM, Sanderson MJ. Covarion structure in plastid genome evolution: a new statistical test. Molecular Biology and Evolution. 22: 914-24. PMID 15625184 DOI: 10.1093/Molbev/Msi076  0.37
2004 Burleigh JG, Mathews S. Phylogenetic signal in nucleotide data from seed plants: implications for resolving the seed plant tree of life. American Journal of Botany. 91: 1599-613. PMID 21652311 DOI: 10.3732/Ajb.91.10.1599  0.373
2003 Burleigh JG, Holtsford TP. Molecular systematics of the eastern North American Silene (Caryophyllaceae): Evidence from nuclear its and chloroplast trnL intron sequences Rhodora. 105: 76-90.  0.628
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