| Year |
Citation |
Score |
| 2023 |
Long Y, Hwang T, Gooding AR, Goodrich KJ, Vallery TK, Rinn JL, Cech TR. Evaluation of the RNA-dependence of PRC2 binding to chromatin in human pluripotent stem cells. Biorxiv : the Preprint Server For Biology. PMID 37645830 DOI: 10.1101/2023.08.17.553776 |
0.375 |
|
| 2023 |
Landshammer A, Bolondi A, Kretzmer H, Much C, Buschow R, Rose A, Wu HJ, Mackowiak SD, Braendl B, Giesselmann P, Tornisiello R, Parsi KM, Huey J, Mielke T, Meierhofer D, ... ... Rinn JL, et al. is a transiently expressed non-coding RNA essential for human endoderm formation. Elife. 12. PMID 36719724 DOI: 10.7554/eLife.83077 |
0.429 |
|
| 2023 |
Mattick JS, Amaral PP, Carninci P, Carpenter S, Chang HY, Chen LL, Chen R, Dean C, Dinger ME, Fitzgerald KA, Gingeras TR, Guttman M, Hirose T, Huarte M, Johnson R, ... ... Rinn JL, et al. Long non-coding RNAs: definitions, functions, challenges and recommendations. Nature Reviews. Molecular Cell Biology. PMID 36596869 DOI: 10.1038/s41580-022-00566-8 |
0.742 |
|
| 2022 |
Jansson-Fritzberg LI, Sousa CI, Smallegan MJ, Song JJ, Gooding AR, Kasinath V, Rinn JL, Cech TR. DNMT1 inhibition by pUG-fold quadruplex RNA. Rna (New York, N.Y.). PMID 36574982 DOI: 10.1261/rna.079479.122 |
0.366 |
|
| 2022 |
Moore JE, Purcaro MJ, Pratt HE, Epstein CB, Shoresh N, Adrian J, Kawli T, Davis CA, Dobin A, Kaul R, Halow J, Van Nostrand EL, Freese P, Gorkin DU, Shen Y, ... ... Rinn J, et al. Author Correction: Expanded encyclopaedias of DNA elements in the human and mouse genomes. Nature. PMID 35474001 DOI: 10.1038/s41586-021-04226-3 |
0.577 |
|
| 2022 |
Much C, Smallegan MJ, Hwang T, Hanson SD, Dumbović G, Rinn JL. Evolutionary divergence of localization and expression. Rna (New York, N.Y.). 28: 842-853. PMID 35304421 DOI: 10.1261/rna.079070.121 |
0.397 |
|
| 2022 |
Carter T, Singh M, Dumbovic G, Chobirko JD, Rinn JL, Feschotte C. Mosaic cis-regulatory evolution drives transcriptional partitioning of HERVH endogenous retrovirus in the human embryo. Elife. 11. PMID 35179489 DOI: 10.7554/eLife.76257 |
0.349 |
|
| 2021 |
Andergassen D, Rinn JL. From genotype to phenotype: genetics of mammalian long non-coding RNAs in vivo. Nature Reviews. Genetics. PMID 34837040 DOI: 10.1038/s41576-021-00427-8 |
0.384 |
|
| 2021 |
Cable J, Heard E, Hirose T, Prasanth KV, Chen LL, Henninger JE, Quinodoz SA, Spector DL, Diermeier SD, Porman AM, Kumar D, Feinberg MW, Shen X, Unfried JP, Johnson R, ... ... Rinn JL, et al. Noncoding RNAs: biology and applications-a Keystone Symposia report. Annals of the New York Academy of Sciences. PMID 34791665 DOI: 10.1111/nyas.14713 |
0.55 |
|
| 2021 |
Haswell JR, Mattioli K, Gerhardinger C, Maass PG, Foster DJ, Peinado P, Wang X, Medina PP, Rinn JL, Slack FJ. Genome-wide CRISPR interference screen identifies long non-coding RNA loci required for differentiation and pluripotency. Plos One. 16: e0252848. PMID 34731163 DOI: 10.1371/journal.pone.0252848 |
0.421 |
|
| 2021 |
Smallegan MJ, Shehata S, Spradlin SF, Swearingen A, Wheeler G, Das A, Corbet G, Nebenfuehr B, Ahrens D, Tauber D, Lennon S, Choi K, Huynh T, Wieser T, Schneider K, ... ... Rinn JL, et al. Genome-wide binding analysis of 195 DNA binding proteins reveals "reservoir" promoters and human specific SVA-repeat family regulation. Plos One. 16: e0237055. PMID 34166368 DOI: 10.1371/journal.pone.0237055 |
0.346 |
|
| 2021 |
Smallegan MJ, Shehata S, Spradlin SF, Swearingen A, Wheeler G, Das A, Corbet G, Nebenfuehr B, Ahrens D, Tauber D, Lennon S, Choi K, Huynh T, Wieser T, Schneider K, ... ... Rinn JL, et al. Genome-wide binding analysis of 195 DNA binding proteins reveals "reservoir" promoters and human specific SVA-repeat family regulation. Plos One. 16: e0237055. PMID 34166368 DOI: 10.1371/journal.pone.0237055 |
0.346 |
|
| 2021 |
Dumbović G, Braunschweig U, Langner HK, Smallegan M, Biayna J, Hass EP, Jastrzebska K, Blencowe B, Cech TR, Caruthers MH, Rinn JL. Nuclear compartmentalization of TERT mRNA and TUG1 lncRNA is driven by intron retention. Nature Communications. 12: 3308. PMID 34083519 DOI: 10.1038/s41467-021-23221-w |
0.413 |
|
| 2021 |
Harman CCD, Bailis W, Zhao J, Hill L, Qu R, Jackson RP, Shyer JA, Steach HR, Kluger Y, Goff LA, Rinn JL, Williams A, Henao-Mejia J, Flavell RA. An in vivo screen of noncoding loci reveals that is a gatekeeper of an Ikaros-dependent checkpoint during haematopoiesis. Proceedings of the National Academy of Sciences of the United States of America. 118. PMID 33446502 DOI: 10.1073/pnas.1918062118 |
0.679 |
|
| 2020 |
Fang H, Bonora G, Lewandowski JP, Thakur J, Filippova GN, Henikoff S, Shendure J, Duan Z, Rinn JL, Deng X, Noble WS, Disteche CM. Trans- and cis-acting effects of Firre on epigenetic features of the inactive X chromosome. Nature Communications. 11: 6053. PMID 33247132 DOI: 10.1038/s41467-020-19879-3 |
0.379 |
|
| 2020 |
Choudhuri A, Trompouki E, Abraham BJ, Colli LM, Kock KH, Mallard W, Yang ML, Vinjamur DS, Ghamari A, Sporrij A, Hoi K, Hummel B, Boatman S, Chan V, Tseng S, ... ... Rinn J, et al. Common variants in signaling transcription-factor-binding sites drive phenotypic variability in red blood cell traits. Nature Genetics. PMID 33230299 DOI: 10.1038/s41588-020-00738-2 |
0.302 |
|
| 2020 |
Ruan X, Li P, Ma Y, Jiang C, Chen Y, Shi Y, Gupta N, Seifuddin F, Pirooznia M, Ohnishi Y, Yoneda N, Nishiwaki M, Dumbovic G, Rinn JL, Higuchi Y, et al. Identification of human long non-coding RNAs associated with nonalcoholic fatty liver disease and metabolic homeostasis. The Journal of Clinical Investigation. PMID 33048844 DOI: 10.1172/JCI136336 |
0.333 |
|
| 2020 |
Lewandowski JP, Dumbović G, Watson AR, Hwang T, Jacobs-Palmer E, Chang N, Much C, Turner KM, Kirby C, Rubinstein ND, Groff AF, Liapis SC, Gerhardinger C, Bester A, Pandolfi PP, ... ... Rinn JL, et al. The Tug1 lncRNA locus is essential for male fertility. Genome Biology. 21: 237. PMID 32894169 DOI: 10.1186/S13059-020-02081-5 |
0.743 |
|
| 2020 |
Moore JE, Purcaro MJ, Pratt HE, Epstein CB, Shoresh N, Adrian J, Kawli T, Davis CA, Dobin A, Kaul R, Halow J, Van Nostrand EL, Freese P, Gorkin DU, ... ... Rinn J, et al. Expanded encyclopaedias of DNA elements in the human and mouse genomes. Nature. 583: 699-710. PMID 32728249 DOI: 10.1038/S41586-020-2493-4 |
0.713 |
|
| 2020 |
Long Y, Hwang T, Gooding AR, Goodrich KJ, Rinn JL, Cech TR. RNA is essential for PRC2 chromatin occupancy and function in human pluripotent stem cells. Nature Genetics. PMID 32632336 DOI: 10.1038/S41588-020-0662-X |
0.403 |
|
| 2020 |
Rinn JL, Chang HY. Long Noncoding RNAs: Molecular Modalities to Organismal Functions. Annual Review of Biochemistry. 89: 283-308. PMID 32569523 DOI: 10.1146/Annurev-Biochem-062917-012708 |
0.57 |
|
| 2020 |
Holmes ZE, Hamilton DJ, Hwang T, Parsonnet NV, Rinn JL, Wuttke DS, Batey RT. The Sox2 transcription factor binds RNA. Nature Communications. 11: 1805. PMID 32286318 DOI: 10.1038/S41467-020-15571-8 |
0.415 |
|
| 2020 |
Friesen M, Warren CR, Yu H, Toyohara T, Ding Q, Florido MHC, Sayre C, Pope BD, Goff LA, Rinn JL, Cowan CA. Mitoregulin Controls β-Oxidation in Human and Mouse Adipocytes. Stem Cell Reports. PMID 32243843 DOI: 10.1016/J.Stemcr.2020.03.002 |
0.615 |
|
| 2019 |
Lewandowski JP, Lee JC, Hwang T, Sunwoo H, Goldstein JM, Groff AF, Chang NP, Mallard W, Williams A, Henao-Meija J, Flavell RA, Lee JT, Gerhardinger C, Wagers AJ, Rinn JL. The Firre locus produces a trans-acting RNA molecule that functions in hematopoiesis. Nature Communications. 10: 5137. PMID 31723143 DOI: 10.1038/S41467-019-12970-4 |
0.419 |
|
| 2019 |
Groff AF, Resetkova N, DiDomenico F, Sakkas D, Penzias A, Rinn JL, Eggan K. RNA-seq as a tool for evaluating human embryo competence. Genome Research. 29: 1705-1718. PMID 31548358 DOI: 10.1101/Gr.252981.119 |
0.339 |
|
| 2019 |
Rowland TJ, Dumbović G, Hass EP, Rinn JL, Cech TR. Single-cell imaging reveals unexpected heterogeneity of telomerase reverse transcriptase expression across human cancer cell lines. Proceedings of the National Academy of Sciences of the United States of America. PMID 31451652 DOI: 10.1073/Pnas.1908275116 |
0.307 |
|
| 2019 |
Barutcu AR, Blencowe BJ, Rinn JL. Differential contribution of steady-state RNA and active transcription in chromatin organization. Embo Reports. e48068. PMID 31448565 DOI: 10.15252/embr.201948068 |
0.372 |
|
| 2019 |
Raj A, Rinn JL. Illuminating Genomic Dark Matter with RNA Imaging. Cold Spring Harbor Perspectives in Biology. 11. PMID 31043413 DOI: 10.1101/Cshperspect.A032094 |
0.345 |
|
| 2019 |
Mattioli K, Volders PJ, Gerhardinger C, Lee JC, Maass PG, Melé M, Rinn JL. High-throughput functional analysis of lncRNA core promoters elucidates rules governing tissue-specificity. Genome Research. PMID 30683753 DOI: 10.1101/Gr.242222.118 |
0.378 |
|
| 2018 |
Groff AF, Barutcu AR, Lewandowski JP, Rinn JL. Enhancers in the Peril lincRNA locus regulate distant but not local genes. Genome Biology. 19: 219. PMID 30537984 DOI: 10.1186/s13059-018-1589-8 |
0.368 |
|
| 2018 |
Elling R, Robinson EK, Shapleigh B, Liapis SC, Covarrubias S, Katzman S, Groff AF, Jiang Z, Agarwal S, Motwani M, Chan J, Sharma S, Hennessy EJ, FitzGerald GA, McManus MT, ... Rinn JL, et al. Genetic Models Reveal cis and trans Immune-Regulatory Activities for lincRNA-Cox2. Cell Reports. 25: 1511-1524.e6. PMID 30404006 DOI: 10.1016/J.Celrep.2018.10.027 |
0.344 |
|
| 2018 |
Cacchiarelli D, Qiu X, Srivatsan S, Manfredi A, Ziller M, Overbey E, Grimaldi A, Grimsby J, Pokharel P, Livak KJ, Li S, Meissner A, Mikkelsen TS, Rinn JL, Trapnell C. Aligning Single-Cell Developmental and Reprogramming Trajectories Identifies Molecular Determinants of Myogenic Reprogramming Outcome. Cell Systems. PMID 30195438 DOI: 10.1016/J.Cels.2018.07.006 |
0.605 |
|
| 2018 |
Maass PG, Barutcu AR, Rinn JL. Interchromosomal interactions: A genomic love story of kissing chromosomes. The Journal of Cell Biology. PMID 30181316 DOI: 10.1083/jcb.201806052 |
0.332 |
|
| 2018 |
Bester AC, Lee JD, Chavez A, Lee YR, Nachmani D, Vora S, Victor J, Sauvageau M, Monteleone E, Rinn JL, Provero P, Church GM, Clohessy JG, Pandolfi PP. An Integrated Genome-wide CRISPRa Approach to Functionalize lncRNAs in Drug Resistance. Cell. 173: 649-664.e20. PMID 29677511 DOI: 10.1016/J.Cell.2018.03.052 |
0.736 |
|
| 2018 |
Barutcu AR, Maass PG, Lewandowski JP, Weiner CL, Rinn JL. A TAD boundary is preserved upon deletion of the CTCF-rich Firre locus. Nature Communications. 9: 1444. PMID 29654311 DOI: 10.1038/s41467-018-03614-0 |
0.308 |
|
| 2018 |
Cesana M, Guo MH, Cacchiarelli D, Wahlster L, Barragan J, Doulatov S, Vo LT, Salvatori B, Trapnell C, Clement K, Cahan P, Tsanov KM, Sousa PM, Tazon-Vega B, Bolondi A, ... ... Rinn JL, et al. A CLK3-HMGA2 Alternative Splicing Axis Impacts Human Hematopoietic Stem Cell Molecular Identity throughout Development. Cell Stem Cell. 22: 575-588.e7. PMID 29625070 DOI: 10.1016/J.Stem.2018.03.012 |
0.626 |
|
| 2018 |
Shukla CJ, McCorkindale AL, Gerhardinger C, Korthauer KD, Cabili MN, Shechner DM, Irizarry RA, Maass PG, Rinn JL. High-throughput identification of RNA nuclear enrichment sequences. The Embo Journal. PMID 29335281 DOI: 10.15252/Embj.201798452 |
0.427 |
|
| 2018 |
Choudhuri A, Trompouki E, Abraham BJ, Colli L, Mallard W, Yang M, Vinjamur D, Ghamari A, Nandakumar S, Hoi K, Hummel B, Boatman S, Chan V, Bowman TV, Yang S, ... ... Rinn J, et al. Transcriptional Signaling Centers Govern Human Erythropoiesis and Harbor Genetic Variations of Red Blood Cell Traits Blood. 132: 1277-1277. DOI: 10.1182/Blood-2018-99-118637 |
0.423 |
|
| 2017 |
Kaewsapsak P, Shechner DM, Mallard W, Rinn JL, Ting AY. Live-cell mapping of organelle-associated RNAs via proximity biotinylation combined with protein-RNA crosslinking. Elife. 6. PMID 29239719 DOI: 10.7554/Elife.29224 |
0.342 |
|
| 2017 |
Mowel WK, McCright SJ, Kotzin JJ, Collet MA, Uyar A, Chen X, DeLaney A, Spencer SP, Virtue AT, Yang E, Villarino A, Kurachi M, Dunagin MC, Pritchard GH, Stein J, ... ... Rinn JL, et al. Group 1 Innate Lymphoid Cell Lineage Identity Is Determined by a cis-Regulatory Element Marked by a Long Non-coding RNA. Immunity. 47: 435-449.e8. PMID 28930659 DOI: 10.1016/J.Immuni.2017.08.012 |
0.694 |
|
| 2017 |
Delás MJ, Sabin LR, Dolzhenko E, Knott SR, Munera Maravilla E, Jackson BT, Wild SA, Kovacevic T, Stork EM, Zhou M, Erard N, Lee E, Kelley DR, Roth M, Barbosa ISA, ... ... Rinn JL, et al. lncRNA requirements for mouse acute myeloid leukemia and normal differentiation. Elife. 6. PMID 28875933 DOI: 10.7554/Elife.25607 |
0.384 |
|
| 2017 |
Mello SS, Sinow C, Raj N, Mazur PK, Bieging-Rolett K, Broz DK, Imam JFC, Vogel H, Wood LD, Sage J, Hirose T, Nakagawa S, Rinn J, Attardi LD. Neat1 is a p53-inducible lincRNA essential for transformation suppression. Genes & Development. PMID 28698299 DOI: 10.1101/Gad.284661.116 |
0.432 |
|
| 2016 |
Melé M, Mattioli K, Mallard W, Shechner DM, Gerhardinger C, Rinn JL. Chromatin environment, transcriptional regulation, and splicing distinguish lincRNAs and mRNAs. Genome Research. PMID 27927715 DOI: 10.1101/gr.214205.116 |
0.37 |
|
| 2016 |
Henry WS, Hendrickson DG, Beca F, Glass B, Lindahl-Allen M, He L, Ji Z, Struhl K, Beck AH, Rinn JL, Toker A. LINC00520 is induced by Src, STAT3, and PI3K and plays a functional role in breast cancer. Oncotarget. PMID 27626181 DOI: 10.18632/Oncotarget.11962 |
0.322 |
|
| 2016 |
Kotzin JJ, Spencer SP, McCright SJ, Kumar DB, Collet MA, Mowel WK, Elliott EN, Uyar A, Makiya MA, Dunagin MC, Harman CC, Virtue AT, Zhu S, Bailis W, Stein J, ... ... Rinn JL, et al. The long non-coding RNA Morrbid regulates Bim and short-lived myeloid cell lifespan. Nature. PMID 27525555 DOI: 10.1038/Nature19346 |
0.672 |
|
| 2016 |
Groff AF, Sanchez-Gomez DB, Soruco MM, Gerhardinger C, Barutcu AR, Li E, Elcavage L, Plana O, Sanchez LV, Lee JC, Sauvageau M, Rinn JL. In Vivo Characterization of Linc-p21 Reveals Functional cis-Regulatory DNA Elements. Cell Reports. PMID 27524623 DOI: 10.1016/J.Celrep.2016.07.050 |
0.749 |
|
| 2016 |
Ferreira LM, Meissner TB, Mikkelsen TS, Mallard W, O'Donnell CW, Tilburgs T, Gomes HA, Camahort R, Sherwood RI, Gifford DK, Rinn JL, Cowan CA, Strominger JL. A distant trophoblast-specific enhancer controls HLA-G expression at the maternal-fetal interface. Proceedings of the National Academy of Sciences of the United States of America. PMID 27078102 DOI: 10.1073/Pnas.1602886113 |
0.709 |
|
| 2016 |
Hacisuleyman E, Shukla CJ, Weiner CL, Rinn JL. Function and evolution of local repeats in the Firre locus. Nature Communications. 7: 11021. PMID 27009974 DOI: 10.1038/ncomms11021 |
0.358 |
|
| 2016 |
Du Z, Sun T, Hacisuleyman E, Fei T, Wang X, Brown M, Rinn JL, Lee MG, Chen Y, Kantoff PW, Liu XS. Integrative analyses reveal a long noncoding RNA-mediated sponge regulatory network in prostate cancer. Nature Communications. 7: 10982. PMID 26975529 DOI: 10.1038/Ncomms10982 |
0.366 |
|
| 2016 |
G Hendrickson D, Kelley DR, Tenen D, Bernstein B, Rinn JL. Widespread RNA binding by chromatin-associated proteins. Genome Biology. 17: 28. PMID 26883116 DOI: 10.1186/S13059-016-0878-3 |
0.405 |
|
| 2016 |
Stojic L, Niemczyk M, Orjalo A, Ito Y, Ruijter AE, Uribe-Lewis S, Joseph N, Weston S, Menon S, Odom DT, Rinn J, Gergely F, Murrell A. Transcriptional silencing of long noncoding RNA GNG12-AS1 uncouples its transcriptional and product-related functions. Nature Communications. 7: 10406. PMID 26832224 DOI: 10.1038/Ncomms10406 |
0.528 |
|
| 2016 |
Bailis W, Harman C, Henao-Mejia J, Williams A, Goff L, Rinn J, Flavell R. Abstract A071: Identification and characterization of long intergenic non-coding RNAs (lincRNAs) governing T cell development and function Cancer Immunology Research. 4. DOI: 10.1158/2326-6066.Imm2016-A071 |
0.482 |
|
| 2015 |
Cheloufi S, Elling U, Hopfgartner B, Jung YL, Murn J, Ninova M, Hubmann M, Badeaux AI, Euong Ang C, Tenen D, Wesche DJ, Abazova N, Hogue M, Tasdemir N, Brumbaugh J, ... ... Rinn J, et al. The histone chaperone CAF-1 safeguards somatic cell identity. Nature. 528: 218-224. PMID 26659182 DOI: 10.1038/Nature15749 |
0.553 |
|
| 2015 |
Briggs JA, Wolvetang EJ, Mattick JS, Rinn JL, Barry G. Mechanisms of Long Non-coding RNAs in Mammalian Nervous System Development, Plasticity, Disease, and Evolution. Neuron. 88: 861-77. PMID 26637795 DOI: 10.1016/j.neuron.2015.09.045 |
0.394 |
|
| 2015 |
Goff LA, Rinn JL. Linking RNA biology to lncRNAs. Genome Research. 25: 1456-65. PMID 26430155 DOI: 10.1101/Gr.191122.115 |
0.7 |
|
| 2015 |
Cacchiarelli D, Trapnell C, Ziller MJ, Soumillon M, Cesana M, Karnik R, Donaghey J, Smith ZD, Ratanasirintrawoot S, Zhang X, Ho Sui SJ, Wu Z, Akopian V, Gifford CA, Doench J, ... Rinn JL, et al. Integrative Analyses of Human Reprogramming Reveal Dynamic Nature of Induced Pluripotency. Cell. 162: 412-424. PMID 26186193 DOI: 10.1016/J.Cell.2015.06.016 |
0.611 |
|
| 2015 |
Broadbent KM, Broadbent JC, Ribacke U, Wirth D, Rinn JL, Sabeti PC. Strand-specific RNA sequencing in Plasmodium falciparum malaria identifies developmentally regulated long non-coding RNA and circular RNA. Bmc Genomics. 16: 454. PMID 26070627 DOI: 10.1186/S12864-015-1603-4 |
0.418 |
|
| 2015 |
Goff LA, Groff AF, Sauvageau M, Trayes-Gibson Z, Sanchez-Gomez DB, Morse M, Martin RD, Elcavage LE, Liapis SC, Gonzalez-Celeiro M, Plana O, Li E, Gerhardinger C, Tomassy GS, Arlotta P, ... Rinn JL, et al. Spatiotemporal expression and transcriptional perturbations by long noncoding RNAs in the mouse brain. Proceedings of the National Academy of Sciences of the United States of America. PMID 26034286 DOI: 10.1073/Pnas.1411263112 |
0.81 |
|
| 2015 |
Shechner DM, Hacisuleyman E, Younger ST, Rinn JL. Multiplexable, locus-specific targeting of long RNAs with CRISPR-Display. Nature Methods. 12: 664-70. PMID 26030444 DOI: 10.1038/nmeth.3433 |
0.381 |
|
| 2015 |
Lai KM, Gong G, Atanasio A, Rojas J, Quispe J, Posca J, White D, Huang M, Fedorova D, Grant C, Miloscio L, Droguett G, Poueymirou WT, Auerbach W, Yancopoulos GD, ... ... Rinn J, et al. Diverse Phenotypes and Specific Transcription Patterns in Twenty Mouse Lines with Ablated LincRNAs. Plos One. 10: e0125522. PMID 25909911 DOI: 10.1371/Journal.Pone.0125522 |
0.438 |
|
| 2015 |
Younger ST, Kenzelmann-Broz D, Jung H, Attardi LD, Rinn JL. Integrative genomic analysis reveals widespread enhancer regulation by p53 in response to DNA damage. Nucleic Acids Research. 43: 4447-62. PMID 25883152 DOI: 10.1093/nar/gkv284 |
0.306 |
|
| 2015 |
Cabili MN, Dunagin MC, McClanahan PD, Biaesch A, Padovan-Merhar O, Regev A, Rinn JL, Raj A. Localization and abundance analysis of human lncRNAs at single-cell and single-molecule resolution. Genome Biology. 16: 20. PMID 25630241 DOI: 10.1186/S13059-015-0586-4 |
0.328 |
|
| 2015 |
Mattick JS, Rinn JL. Discovery and annotation of long noncoding RNAs. Nature Structural & Molecular Biology. 22: 5-7. PMID 25565026 DOI: 10.1038/nsmb.2942 |
0.387 |
|
| 2015 |
Molyneaux BJ, Goff LA, Brettler AC, Chen HH, Brown JR, Hrvatin S, Rinn JL, Arlotta P. DeCoN: genome-wide analysis of in vivo transcriptional dynamics during pyramidal neuron fate selection in neocortex. Neuron. 85: 275-88. PMID 25556833 DOI: 10.1016/J.Neuron.2014.12.024 |
0.664 |
|
| 2015 |
Dunagin M, Cabili MN, Rinn J, Raj A. Visualization of lncRNA by single-molecule fluorescence in situ hybridization. Methods in Molecular Biology (Clifton, N.J.). 1262: 3-19. PMID 25555572 DOI: 10.1007/978-1-4939-2253-6_1 |
0.422 |
|
| 2015 |
Broadbent KM, Broadbent JC, Ribacke U, Wirth D, Rinn JL, Sabeti PC. Strand-specific RNA sequencing in Plasmodium falciparum malaria identifies developmentally regulated long non-coding RNA and circular RNA Bmc Genomics. 16. DOI: 10.1186/s12864-015-1603-4 |
0.364 |
|
| 2014 |
Kelley DR, Hendrickson DG, Tenen D, Rinn JL. Transposable elements modulate human RNA abundance and splicing via specific RNA-protein interactions. Genome Biology. 15: 537. PMID 25572935 DOI: 10.1186/s13059-014-0537-5 |
0.463 |
|
| 2014 |
Rinn J, Guttman M. RNA Function. RNA and dynamic nuclear organization. Science (New York, N.Y.). 345: 1240-1. PMID 25214588 DOI: 10.1126/Science.1252966 |
0.429 |
|
| 2014 |
Rinn JL. lncRNAs: linking RNA to chromatin. Cold Spring Harbor Perspectives in Biology. 6. PMID 25085913 DOI: 10.1101/cshperspect.a018614 |
0.388 |
|
| 2014 |
Lodato S, Molyneaux BJ, Zuccaro E, Goff LA, Chen HH, Yuan W, Meleski A, Takahashi E, Mahony S, Rinn JL, Gifford DK, Arlotta P. Gene co-regulation by Fezf2 selects neurotransmitter identity and connectivity of corticospinal neurons. Nature Neuroscience. 17: 1046-54. PMID 24997765 DOI: 10.1038/Nn.3757 |
0.622 |
|
| 2014 |
Younger ST, Rinn JL. 'Lnc'-ing enhancers to MYC regulation. Cell Research. 24: 643-4. PMID 24777251 DOI: 10.1038/cr.2014.54 |
0.365 |
|
| 2014 |
Trapnell C, Cacchiarelli D, Grimsby J, Pokharel P, Li S, Morse M, Lennon NJ, Livak KJ, Mikkelsen TS, Rinn JL. The dynamics and regulators of cell fate decisions are revealed by pseudotemporal ordering of single cells. Nature Biotechnology. 32: 381-6. PMID 24658644 DOI: 10.1038/Nbt.2859 |
0.646 |
|
| 2014 |
Hacisuleyman E, Goff LA, Trapnell C, Williams A, Henao-Mejia J, Sun L, McClanahan P, Hendrickson DG, Sauvageau M, Kelley DR, Morse M, Engreitz J, Lander ES, Guttman M, Lodish HF, ... ... Rinn JL, et al. Topological organization of multichromosomal regions by the long intergenic noncoding RNA Firre. Nature Structural & Molecular Biology. 21: 198-206. PMID 24463464 DOI: 10.1038/Nsmb.2764 |
0.8 |
|
| 2014 |
Tay Y, Rinn J, Pandolfi PP. The multilayered complexity of ceRNA crosstalk and competition. Nature. 505: 344-52. PMID 24429633 DOI: 10.1038/Nature12986 |
0.504 |
|
| 2014 |
Silverman IM, Li F, Alexander A, Goff L, Trapnell C, Rinn JL, Gregory BD. RNase-mediated protein footprint sequencing reveals protein-binding sites throughout the human transcriptome. Genome Biology. 15: R3. PMID 24393486 DOI: 10.1186/Gb-2014-15-1-R3 |
0.757 |
|
| 2014 |
Choudhuri A, Abraham B, Mallard W, Hummel B, Boatman S, Bowman T, DiBiase A, Rinn J, Young R, Zon L, Trompouki E. Lineage regulators and signaling transcription factors during erythropoiesis Experimental Hematology. 42: S63. DOI: 10.1016/J.Exphem.2014.07.239 |
0.343 |
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| 2014 |
Lehnertz B, Boucher G, Mallard W, Gendron P, Hebert J, Lemieux S, Rinn J, Sauvageau G. Long non-coding RNA expression in normal and leukemic human blood samples: Towards the identification of novel biomarkers and hematopoietic regulators Experimental Hematology. 42: S45. DOI: 10.1016/J.Exphem.2014.07.166 |
0.62 |
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| 2013 |
Sauvageau M, Goff LA, Lodato S, Bonev B, Groff AF, Gerhardinger C, Sanchez-Gomez DB, Hacisuleyman E, Li E, Spence M, Liapis SC, Mallard W, Morse M, Swerdel MR, D'Ecclessis MF, ... ... Rinn JL, et al. Multiple knockout mouse models reveal lincRNAs are required for life and brain development. Elife. 2: e01749. PMID 24381249 DOI: 10.7554/Elife.01749 |
0.78 |
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| 2013 |
Yoon JH, Abdelmohsen K, Kim J, Yang X, Martindale JL, Tominaga-Yamanaka K, White EJ, Orjalo AV, Rinn JL, Kreft SG, Wilson GM, Gorospe M. Scaffold function of long non-coding RNA HOTAIR in protein ubiquitination. Nature Communications. 4: 2939. PMID 24326307 DOI: 10.1038/Ncomms3939 |
0.375 |
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| 2013 |
Goff LA, Rinn JL. Poly-combing the genome for RNA. Nature Structural & Molecular Biology. 20: 1344-6. PMID 24304912 DOI: 10.1038/Nsmb.2728 |
0.696 |
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| 2013 |
Di Ruscio A, Ebralidze AK, Benoukraf T, Amabile G, Goff LA, Terragni J, Figueroa ME, De Figueiredo Pontes LL, Alberich-Jorda M, Zhang P, Wu M, D'Alò F, Melnick A, Leone G, Ebralidze KK, ... ... Rinn JL, et al. DNMT1-interacting RNAs block gene-specific DNA methylation. Nature. 503: 371-6. PMID 24107992 DOI: 10.1038/Nature12598 |
0.7 |
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| 2013 |
Maamar H, Cabili MN, Rinn J, Raj A. linc-HOXA1 is a noncoding RNA that represses Hoxa1 transcription in cis. Genes & Development. 27: 1260-71. PMID 23723417 DOI: 10.1101/Gad.217018.113 |
0.535 |
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| 2013 |
Chew GL, Pauli A, Rinn JL, Regev A, Schier AF, Valen E. Ribosome profiling reveals resemblance between long non-coding RNAs and 5' leaders of coding RNAs. Development (Cambridge, England). 140: 2828-34. PMID 23698349 DOI: 10.1242/Dev.098343 |
0.368 |
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| 2013 |
Gifford CA, Ziller MJ, Gu H, Trapnell C, Donaghey J, Tsankov A, Shalek AK, Kelley DR, Shishkin AA, Issner R, Zhang X, Coyne M, Fostel JL, Holmes L, Meldrim J, ... ... Rinn J, et al. Transcriptional and epigenetic dynamics during specification of human embryonic stem cells. Cell. 153: 1149-63. PMID 23664763 DOI: 10.1016/J.Cell.2013.04.037 |
0.646 |
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| 2013 |
Henao-Mejia J, Williams A, Goff LA, Staron M, Licona-Limón P, Kaech SM, Nakayama M, Rinn JL, Flavell RA. The microRNA miR-181 is a critical cellular metabolic rheostat essential for NKT cell ontogenesis and lymphocyte development and homeostasis. Immunity. 38: 984-97. PMID 23623381 DOI: 10.1016/J.Immuni.2013.02.021 |
0.557 |
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| 2013 |
Sun L, Goff LA, Trapnell C, Alexander R, Lo KA, Hacisuleyman E, Sauvageau M, Tazon-Vega B, Kelley DR, Hendrickson DG, Yuan B, Kellis M, Lodish HF, Rinn JL. Long noncoding RNAs regulate adipogenesis. Proceedings of the National Academy of Sciences of the United States of America. 110: 3387-92. PMID 23401553 DOI: 10.1073/Pnas.1222643110 |
0.816 |
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| 2013 |
Trapnell C, Hendrickson DG, Sauvageau M, Goff L, Rinn JL, Pachter L. Differential analysis of gene regulation at transcript resolution with RNA-seq. Nature Biotechnology. 31: 46-53. PMID 23222703 DOI: 10.1038/Nbt.2450 |
0.823 |
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| 2013 |
Kretz M, Siprashvili Z, Chu C, Webster DE, Zehnder A, Qu K, Lee CS, Flockhart RJ, Groff AF, Chow J, Johnston D, Kim GE, Spitale RC, Flynn RA, Zheng GX, ... ... Rinn JL, et al. Control of somatic tissue differentiation by the long non-coding RNA TINCR. Nature. 493: 231-5. PMID 23201690 DOI: 10.1038/Nature11661 |
0.827 |
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| 2013 |
Slavoff SA, Mitchell AJ, Schwaid AG, Cabili MN, Ma J, Levin JZ, Karger AD, Budnik BA, Rinn JL, Saghatelian A. Peptidomic discovery of short open reading frame-encoded peptides in human cells. Nature Chemical Biology. 9: 59-64. PMID 23160002 DOI: 10.1038/Nchembio.1120 |
0.358 |
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| 2012 |
Kelley D, Rinn J. Transposable elements reveal a stem cell-specific class of long noncoding RNAs. Genome Biology. 13: R107. PMID 23181609 DOI: 10.1186/gb-2012-13-11-r107 |
0.418 |
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| 2012 |
Siprashvili Z, Webster DE, Kretz M, Johnston D, Rinn JL, Chang HY, Khavari PA. Identification of proteins binding coding and non-coding human RNAs using protein microarrays. Bmc Genomics. 13: 633. PMID 23157412 DOI: 10.1186/1471-2164-13-633 |
0.542 |
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| 2012 |
Washietl S, Will S, Hendrix DA, Goff LA, Rinn JL, Berger B, Kellis M. Computational analysis of noncoding RNAs. Wiley Interdisciplinary Reviews. Rna. 3: 759-78. PMID 22991327 DOI: 10.1002/Wrna.1134 |
0.748 |
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| 2012 |
Rinn JL, Chang HY. Genome regulation by long noncoding RNAs. Annual Review of Biochemistry. 81: 145-66. PMID 22663078 DOI: 10.1182/Blood.V122.21.Sci-29.Sci-29 |
0.61 |
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| 2012 |
Trapnell C, Roberts A, Goff L, Pertea G, Kim D, Kelley DR, Pimentel H, Salzberg SL, Rinn JL, Pachter L. Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks. Nature Protocols. 7: 562-78. PMID 22383036 DOI: 10.1038/Nprot.2012.016 |
0.816 |
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| 2012 |
Guttman M, Rinn JL. Modular regulatory principles of large non-coding RNAs. Nature. 482: 339-46. PMID 22337053 DOI: 10.1038/nature10887 |
0.417 |
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| 2012 |
Kretz M, Webster DE, Flockhart RJ, Lee CS, Zehnder A, Lopez-Pajares V, Qu K, Zheng GX, Chow J, Kim GE, Rinn JL, Chang HY, Siprashvili Z, Khavari PA. Suppression of progenitor differentiation requires the long noncoding RNA ANCR. Genes & Development. 26: 338-43. PMID 22302877 DOI: 10.1101/Gad.182121.111 |
0.783 |
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| 2012 |
Pauli A, Valen E, Lin MF, Garber M, Vastenhouw NL, Levin JZ, Fan L, Sandelin A, Rinn JL, Regev A, Schier AF. Systematic identification of long noncoding RNAs expressed during zebrafish embryogenesis. Genome Research. 22: 577-91. PMID 22110045 DOI: 10.1101/gr.133009.111 |
0.471 |
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| 2012 |
Mercer TR, Gerhardt DJ, Dinger ME, Crawford J, Trapnell C, Jeddeloh JA, Mattick JS, Rinn JL. Targeted RNA sequencing reveals the deep complexity of the human transcriptome. Nature Biotechnology. 30: 99-104. PMID 22081020 DOI: 10.1038/Nbt.2024 |
0.673 |
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| 2011 |
Cabili MN, Trapnell C, Goff L, Koziol M, Tazon-Vega B, Regev A, Rinn JL. Integrative annotation of human large intergenic noncoding RNAs reveals global properties and specific subclasses. Genes & Development. 25: 1915-27. PMID 21890647 DOI: 10.1101/Gad.17446611 |
0.809 |
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| 2011 |
Guttman M, Donaghey J, Carey BW, Garber M, Grenier JK, Munson G, Young G, Lucas AB, Ach R, Bruhn L, Yang X, Amit I, Meissner A, Regev A, Rinn JL, et al. lincRNAs act in the circuitry controlling pluripotency and differentiation. Nature. 477: 295-300. PMID 21874018 DOI: 10.1038/Nature10398 |
0.393 |
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| 2011 |
Clark MB, Amaral PP, Schlesinger FJ, Dinger ME, Taft RJ, Rinn JL, Ponting CP, Stadler PF, Morris KV, Morillon A, Rozowsky JS, Gerstein MB, Wahlestedt C, Hayashizaki Y, Carninci P, et al. The reality of pervasive transcription. Plos Biology. 9: e1000625; discussion. PMID 21765801 DOI: 10.1371/Journal.Pbio.1000625 |
0.426 |
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| 2011 |
Broadbent KM, Park D, Wolf AR, Van Tyne D, Sims JS, Ribacke U, Volkman S, Duraisingh M, Wirth D, Sabeti PC, Rinn JL. A global transcriptional analysis of Plasmodium falciparum malaria reveals a novel family of telomere-associated lncRNAs. Genome Biology. 12: R56. PMID 21689454 DOI: 10.1186/Gb-2011-12-6-R56 |
0.368 |
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| 2011 |
Roberts A, Trapnell C, Donaghey J, Rinn JL, Pachter L. Improving RNA-Seq expression estimates by correcting for fragment bias. Genome Biology. 12: R22. PMID 21410973 DOI: 10.1186/Gb-2011-12-3-R22 |
0.626 |
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| 2011 |
Khalil AM, Rinn JL. RNA-protein interactions in human health and disease. Seminars in Cell & Developmental Biology. 22: 359-65. PMID 21333748 DOI: 10.1016/j.semcdb.2011.02.016 |
0.367 |
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| 2011 |
Pauli A, Rinn JL, Schier AF. Non-coding RNAs as regulators of embryogenesis. Nature Reviews. Genetics. 12: 136-49. PMID 21245830 DOI: 10.1038/nrg2904 |
0.378 |
|
| 2010 |
Loewer S, Cabili MN, Guttman M, Loh YH, Thomas K, Park IH, Garber M, Curran M, Onder T, Agarwal S, Manos PD, Datta S, Lander ES, Schlaeger TM, Daley GQ, ... Rinn JL, et al. Large intergenic non-coding RNA-RoR modulates reprogramming of human induced pluripotent stem cells. Nature Genetics. 42: 1113-7. PMID 21057500 DOI: 10.1038/Ng.710 |
0.345 |
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| 2010 |
Kertesz M, Wan Y, Mazor E, Rinn JL, Nutter RC, Chang HY, Segal E. Genome-wide measurement of RNA secondary structure in yeast. Nature. 467: 103-7. PMID 20811459 DOI: 10.1038/Nature09322 |
0.697 |
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| 2010 |
Huarte M, Rinn JL. Large non-coding RNAs: missing links in cancer? Human Molecular Genetics. 19: R152-61. PMID 20729297 DOI: 10.1093/hmg/ddq353 |
0.346 |
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| 2010 |
Huarte M, Guttman M, Feldser D, Garber M, Koziol MJ, Kenzelmann-Broz D, Khalil AM, Zuk O, Amit I, Rabani M, Attardi LD, Regev A, Lander ES, Jacks T, Rinn JL. A large intergenic noncoding RNA induced by p53 mediates global gene repression in the p53 response. Cell. 142: 409-19. PMID 20673990 DOI: 10.1016/J.Cell.2010.06.040 |
0.354 |
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| 2010 |
Kellis M, Rinn JL. Sequences to systems. Genome Biology. 11: 303. PMID 20500907 DOI: 10.1186/Gb-2010-11-5-303 |
0.486 |
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| 2010 |
Guttman M, Garber M, Levin JZ, Donaghey J, Robinson J, Adiconis X, Fan L, Koziol MJ, Gnirke A, Nusbaum C, Rinn JL, Lander ES, Regev A. Ab initio reconstruction of cell type-specific transcriptomes in mouse reveals the conserved multi-exonic structure of lincRNAs. Nature Biotechnology. 28: 503-10. PMID 20436462 DOI: 10.1038/nbt.1633 |
0.442 |
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| 2010 |
Gupta RA, Shah N, Wang KC, Kim J, Horlings HM, Wong DJ, Tsai MC, Hung T, Argani P, Rinn JL, Wang Y, Brzoska P, Kong B, Li R, West RB, et al. Long non-coding RNA HOTAIR reprograms chromatin state to promote cancer metastasis. Nature. 464: 1071-6. PMID 20393566 DOI: 10.1038/Nature08975 |
0.626 |
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| 2010 |
Koziol MJ, Rinn JL. RNA traffic control of chromatin complexes. Current Opinion in Genetics & Development. 20: 142-8. PMID 20362426 DOI: 10.1016/j.gde.2010.03.003 |
0.35 |
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| 2010 |
Vastenhouw NL, Zhang Y, Woods IG, Imam F, Regev A, Liu XS, Rinn J, Schier AF. Chromatin signature of embryonic pluripotency is established during genome activation. Nature. 464: 922-6. PMID 20336069 DOI: 10.1038/Nature08866 |
0.443 |
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| 2010 |
Kertesz M, Wan Y, Mazor E, Rinn J, Nutter R, Chang H, Segal E. Probing RNA structure genome-wide using high throughput sequencing Nature Protocols. DOI: 10.1038/Nprot.2010.152 |
0.708 |
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| 2010 |
Flesher DT, Chaivorapol C, Wolslegel K, Abbas A, Kingsmore S, Rinn J, Sorani M, Wu T, Behrens T. Whole Transcriptome Sequencing in SLE: Deep Sequencing of RNA from SLE Blood Reveals Interferon-regulated Alternative Splicing Events Clinical Immunology. 135: S9. DOI: 10.1016/J.Clim.2010.03.034 |
0.419 |
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| 2009 |
Amit I, Garber M, Chevrier N, Leite AP, Donner Y, Eisenhaure T, Guttman M, Grenier JK, Li W, Zuk O, Schubert LA, Birditt B, Shay T, Goren A, Zhang X, ... ... Rinn JL, et al. Unbiased reconstruction of a mammalian transcriptional network mediating pathogen responses. Science (New York, N.Y.). 326: 257-63. PMID 19729616 DOI: 10.1126/Science.1179050 |
0.31 |
|
| 2009 |
Khalil AM, Guttman M, Huarte M, Garber M, Raj A, Rivea Morales D, Thomas K, Presser A, Bernstein BE, van Oudenaarden A, Regev A, Lander ES, Rinn JL. Many human large intergenic noncoding RNAs associate with chromatin-modifying complexes and affect gene expression. Proceedings of the National Academy of Sciences of the United States of America. 106: 11667-72. PMID 19571010 DOI: 10.1073/Pnas.0904715106 |
0.435 |
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| 2009 |
Mace KA, Restivo TE, Rinn JL, Paquet AC, Chang HY, Young DM, Boudreau NJ. HOXA3 modulates injury-induced mobilization and recruitment of bone marrow-derived cells. Stem Cells (Dayton, Ohio). 27: 1654-65. PMID 19544454 DOI: 10.1002/Stem.90 |
0.397 |
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| 2009 |
Somervaille TC, Matheny CJ, Spencer GJ, Iwasaki M, Rinn JL, Witten DM, Chang HY, Shurtleff SA, Downing JR, Cleary ML. Hierarchical maintenance of MLL myeloid leukemia stem cells employs a transcriptional program shared with embryonic rather than adult stem cells. Cell Stem Cell. 4: 129-40. PMID 19200802 DOI: 10.1016/J.Stem.2008.11.015 |
0.419 |
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| 2009 |
Guttman M, Amit I, Garber M, French C, Lin MF, Feldser D, Huarte M, Zuk O, Carey BW, Cassady JP, Cabili MN, Jaenisch R, Mikkelsen TS, Jacks T, Hacohen N, ... ... Rinn JL, et al. Chromatin signature reveals over a thousand highly conserved large non-coding RNAs in mammals. Nature. 458: 223-7. PMID 19182780 DOI: 10.1038/Nature07672 |
0.645 |
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| 2008 |
Su MA, Giang K, Zumer K, Jiang H, Oven I, Rinn JL, Devoss JJ, Johannes KP, Lu W, Gardner J, Chang A, Bubulya P, Chang HY, Peterlin BM, Anderson MS. Mechanisms of an autoimmunity syndrome in mice caused by a dominant mutation in Aire. The Journal of Clinical Investigation. 118: 1712-26. PMID 18414681 DOI: 10.1172/Jci34523 |
0.395 |
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| 2008 |
Rinn JL, Wang JK, Liu H, Montgomery K, van de Rijn M, Chang HY. A systems biology approach to anatomic diversity of skin. The Journal of Investigative Dermatology. 128: 776-82. PMID 18337710 DOI: 10.1038/Sj.Jid.5700986 |
0.494 |
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| 2008 |
Rinn JL, Wang JK, Allen N, Brugmann SA, Mikels AJ, Liu H, Ridky TW, Stadler HS, Nusse R, Helms JA, Chang HY. A dermal HOX transcriptional program regulates site-specific epidermal fate. Genes & Development. 22: 303-7. PMID 18245445 DOI: 10.1101/gad.1610508 |
0.477 |
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| 2008 |
Chang W, Zaarour RF, Reck-Peterson S, Rinn J, Singer RH, Snyder M, Novick P, Mooseker MS. Myo2p, a class V myosin in budding yeast, associates with a large ribonucleic acid-protein complex that contains mRNAs and subunits of the RNA-processing body. Rna (New York, N.Y.). 14: 491-502. PMID 18218704 DOI: 10.1261/Rna.665008 |
0.508 |
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| 2007 |
Lan F, Bayliss PE, Rinn JL, Whetstine JR, Wang JK, Chen S, Iwase S, Alpatov R, Issaeva I, Canaani E, Roberts TM, Chang HY, Shi Y. A histone H3 lysine 27 demethylase regulates animal posterior development. Nature. 449: 689-94. PMID 17851529 DOI: 10.1038/Nature06192 |
0.509 |
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| 2007 |
Rinn JL, Kertesz M, Wang JK, Squazzo SL, Xu X, Brugmann SA, Goodnough LH, Helms JA, Farnham PJ, Segal E, Chang HY. Functional demarcation of active and silent chromatin domains in human HOX loci by noncoding RNAs. Cell. 129: 1311-23. PMID 17604720 DOI: 10.1016/J.Cell.2007.05.022 |
0.596 |
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| 2007 |
O'Geen H, Squazzo SL, Iyengar S, Blahnik K, Rinn JL, Chang HY, Green R, Farnham PJ. Genome-wide analysis of KAP1 binding suggests autoregulation of KRAB-ZNFs. Plos Genetics. 3: e89. PMID 17542650 DOI: 10.1371/Journal.Pgen.0030089 |
0.52 |
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| 2007 |
Sayward FG, Yang J, Nelson FK, Euskirchen G, Urban AE, Bertone P, Rinn J, Weissman S, Gerstein M, Snyder M, Miller PL. Design issues in implementing a portable Sample Tracking and Analysis Research Support (STARS) system for PCR based microarray research 2006 Ieee Conference On Information Sciences and Systems, Ciss 2006 - Proceedings. 1578-1598. DOI: 10.1109/CISS.2006.286390 |
0.504 |
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| 2006 |
DeVoss J, Hou Y, Johannes K, Lu W, Liou GI, Rinn J, Chang H, Caspi RR, Caspi R, Fong L, Anderson MS. Spontaneous autoimmunity prevented by thymic expression of a single self-antigen. The Journal of Experimental Medicine. 203: 2727-35. PMID 17116738 DOI: 10.1084/Jem.20061864 |
0.459 |
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| 2006 |
Rinn JL, Bondre C, Gladstone HB, Brown PO, Chang HY. Anatomic demarcation by positional variation in fibroblast gene expression programs. Plos Genetics. 2: e119. PMID 16895450 DOI: 10.1371/Journal.Pgen.0020119 |
0.6 |
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| 2006 |
DeVoss J, Hou Y, Johannes K, Lu W, Liou GI, Rinn J, Chang H, Caspi RR, Fong L, Anderson MS. CORRECTION Journal of Experimental Medicine. 204: 203-203. DOI: 10.1084/Jem.20061864121306C |
0.367 |
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| 2005 |
Rinn JL, Snyder M. Sexual dimorphism in mammalian gene expression. Trends in Genetics : Tig. 21: 298-305. PMID 15851067 DOI: 10.1016/J.Tig.2005.03.005 |
0.371 |
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| 2004 |
Bertone P, Stolc V, Royce TE, Rozowsky JS, Urban AE, Zhu X, Rinn JL, Tongprasit W, Samanta M, Weissman S, Gerstein M, Snyder M. Global identification of human transcribed sequences with genome tiling arrays. Science (New York, N.Y.). 306: 2242-6. PMID 15539566 DOI: 10.1126/Science.1103388 |
0.762 |
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| 2004 |
Rinn JL, Rozowsky JS, Laurenzi IJ, Petersen PH, Zou K, Zhong W, Gerstein M, Snyder M. Major molecular differences between mammalian sexes are involved in drug metabolism and renal function. Developmental Cell. 6: 791-800. PMID 15177028 DOI: 10.1016/J.Devcel.2004.05.005 |
0.352 |
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| 2004 |
Euskirchen G, Royce TE, Bertone P, Martone R, Rinn JL, Nelson FK, Sayward F, Luscombe NM, Miller P, Gerstein M, Weissman S, Snyder M. CREB binds to multiple loci on human chromosome 22. Molecular and Cellular Biology. 24: 3804-14. PMID 15082775 DOI: 10.1128/Mcb.24.9.3804-3814.2004 |
0.788 |
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| 2003 |
Lian Z, Euskirchen G, Rinn J, Martone R, Bertone P, Hartman S, Royce T, Nelson K, Sayward F, Luscombe N, Yang J, Li JL, Miller P, Urban AE, Gerstein M, et al. Identification of novel functional elements in the human genome. Cold Spring Harbor Symposia On Quantitative Biology. 68: 317-22. PMID 15338632 DOI: 10.1101/Sqb.2003.68.317 |
0.755 |
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| 2003 |
Martone R, Euskirchen G, Bertone P, Hartman S, Royce TE, Luscombe NM, Rinn JL, Nelson FK, Miller P, Gerstein M, Weissman S, Snyder M. Distribution of NF-kappaB-binding sites across human chromosome 22. Proceedings of the National Academy of Sciences of the United States of America. 100: 12247-52. PMID 14527995 DOI: 10.1073/Pnas.2135255100 |
0.767 |
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| 2003 |
Rinn JL, Euskirchen G, Bertone P, Martone R, Luscombe NM, Hartman S, Harrison PM, Nelson FK, Miller P, Gerstein M, Weissman S, Snyder M. The transcriptional activity of human Chromosome 22. Genes & Development. 17: 529-40. PMID 12600945 DOI: 10.1101/Gad.1055203 |
0.801 |
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