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Panagiotis Papasaikas, Ph.D. - Publications

Affiliations: 
2010 Carnegie Mellon University, Pittsburgh, PA 
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14 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2021 Vivori C, Papasaikas P, Stadhouders R, Di Stefano B, Rubio AR, Balaguer CB, Generoso S, Mallol A, Sardina JL, Payer B, Graf T, Valcárcel J. Dynamics of alternative splicing during somatic cell reprogramming reveals functions for RNA-binding proteins CPSF3, hnRNP UL1, and TIA1. Genome Biology. 22: 171. PMID 34082786 DOI: 10.1186/s13059-021-02372-5  0.313
2020 Cowan CS, Renner M, De Gennaro M, Gross-Scherf B, Goldblum D, Hou Y, Munz M, Rodrigues TM, Krol J, Szikra T, Cuttat R, Waldt A, Papasaikas P, Diggelmann R, Patino-Alvarez CP, et al. Cell Types of the Human Retina and Its Organoids at Single-Cell Resolution. Cell. 182: 1623-1640.e34. PMID 32946783 DOI: 10.1016/J.Cell.2020.08.013  0.319
2019 Keiper S, Papasaikas P, Will CL, Valcárcel J, Girard C, Lührmann R. Smu1 and RED are required for activation of spliceosomal B complexes assembled on short introns. Nature Communications. 10: 3639. PMID 31409787 DOI: 10.1038/S41467-019-11293-8  0.419
2019 Welte T, Tuck AC, Papasaikas P, Carl SH, Flemr M, Knuckles P, Rankova A, Bühler M, Großhans H. The RNA hairpin binder TRIM71 modulates alternative splicing by repressing MBNL1. Genes & Development. PMID 31371437 DOI: 10.1101/Gad.328492.119  0.435
2019 Carbonell C, Ulsamer A, Vivori C, Papasaikas P, Böttcher R, Joaquin M, Miñana B, Tejedor JR, de Nadal E, Valcárcel J, Posas F. Functional Network Analysis Reveals the Relevance of SKIIP in the Regulation of Alternative Splicing by p38 SAPK. Cell Reports. 27: 847-859.e6. PMID 30995481 DOI: 10.1016/J.Celrep.2019.03.060  0.334
2018 Horiuchi K, Perez-Cerezales S, Papasaikas P, Ramos-Ibeas P, López-Cardona AP, Laguna-Barraza R, Fonseca Balvís N, Pericuesta E, Fernández-González R, Planells B, Viera A, Suja JA, Ross PJ, Alén F, Orio L, et al. Impaired Spermatogenesis, Muscle, and Erythrocyte Function in U12 Intron Splicing-Defective Zrsr1 Mutant Mice. Cell Reports. 23: 143-155. PMID 29617656 DOI: 10.1016/J.Celrep.2018.03.028  0.371
2016 Wurth L, Papasaikas P, Olmeda D, Bley N, Calvo GT, Guerrero S, Cerezo-Wallis D, Martinez-Useros J, García-Fernández M, Hüttelmaier S, Soengas MS, Gebauer F. UNR/CSDE1 Drives a Post-transcriptional Program to Promote Melanoma Invasion and Metastasis. Cancer Cell. 30: 694-707. PMID 27908735 DOI: 10.1016/J.Ccell.2016.10.004  0.413
2015 Papasaikas P, Valcárcel J. The Spliceosome: The Ultimate RNA Chaperone and Sculptor. Trends in Biochemical Sciences. PMID 26682498 DOI: 10.1016/J.Tibs.2015.11.003  0.435
2015 Papasaikas P, Rao A, Huggins P, Valcarcel J, Lopez A. Reconstruction of composite regulator-target splicing networks from high-throughput transcriptome data. Bmc Genomics. 16: S7. PMID 26449793 DOI: 10.1186/1471-2164-16-S10-S7  0.394
2015 Iannone C, Pohl A, Papasaikas P, Soronellas D, Vicent GP, Beato M, ValcáRcel J. Relationship between nucleosome positioning and progesterone-induced alternative splicing in breast cancer cells. Rna (New York, N.Y.). 21: 360-74. PMID 25589247 DOI: 10.1261/Rna.048843.114  0.394
2015 Papasaikas P, Tejedor JR, Vigevani L, Valcárcel J. Functional splicing network reveals extensive regulatory potential of the core spliceosomal machinery. Molecular Cell. 57: 7-22. PMID 25482510 DOI: 10.1016/J.Molcel.2014.10.030  0.393
2015 Tejedor JR, Papasaikas P, Valcárcel J. Genome-wide identification of Fas/CD95 alternative splicing regulators reveals links with iron homeostasis. Molecular Cell. 57: 23-38. PMID 25482508 DOI: 10.1016/J.Molcel.2014.10.029  0.37
2014 Ferreira PG, Jares P, Rico D, Gómez-López G, Martínez-Trillos A, Villamor N, Ecker S, González-Pérez A, Knowles DG, Monlong J, Johnson R, Quesada V, Djebali S, Papasaikas P, López-Guerra M, et al. Transcriptome characterization by RNA sequencing identifies a major molecular and clinical subdivision in chronic lymphocytic leukemia. Genome Research. 24: 212-26. PMID 24265505 DOI: 10.1101/Gr.152132.112  0.424
2010 Talkowski ME, McCann KL, Chen M, McClain L, Bamne M, Wood J, Chowdari KV, Watson A, Prasad KM, Kirov G, Georgieva L, Toncheva D, Mansour H, Lewis DA, Owen M, ... ... Papasaikas P, et al. Fine-mapping reveals novel alternative splicing of the dopamine transporter. American Journal of Medical Genetics. Part B, Neuropsychiatric Genetics : the Official Publication of the International Society of Psychiatric Genetics. 153: 1434-47. PMID 20957647 DOI: 10.1002/Ajmg.B.31125  0.463
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